Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0615 Punica granatum HOM05D005327 ORTHO05D006655 1.2e-77 293.1 146 100.0
PGR044G1838 Punica granatum HOM05D005327 ORTHO05D006655 6.9e-70 267.3 166 83.7
Eucgr.C02197 Eucalyptus grandis HOM05D005327 ORTHO05D006655 6.7e-49 197.6 166 65.7
Dinv02614 Davidia involucrata HOM05D005327 ORTHO05D006655 5.6e-48 194.5 166 61.4
Duzib170G0396 Durio zibethinus HOM05D005327 ORTHO05D006655 7.4e-48 194.1 166 62.7
Hma1.2p1_0022F.1_g014810 Hydrangea macrophylla HOM05D005327 ORTHO05D006655 3.7e-47 191.8 167 62.3
Hma1.2p1_0022F.1_g014820 Hydrangea macrophylla HOM05D005327 ORTHO05D006655 3.7e-47 191.8 167 62.3
vmacro20791 Vaccinium macrocarpon HOM05D005327 ORTHO05D006655 1.1e-46 190.3 166 61.4
Thecc.09G189900 Theobroma cacao HOM05D005327 ORTHO05D006655 1.4e-46 189.9 166 60.8
TAR383G0919 Trochodendron aralioides HOM05D005327 ORTHO05D006655 1.4e-46 189.9 166 60.2
Atru.chr7.986 Acer truncatum HOM05D005327 ORTHO05D006655 1.8e-46 189.5 166 60.2
CANSAT01G0668 Cannabis sativa HOM05D005327 ORTHO05D006655 2.4e-46 189.1 166 62.0
Lalb_Chr09g0331881 Lupinus albus HOM05D005327 ORTHO05D006655 2.4e-46 189.1 166 57.8
Solyc07g014640.3 Solanum lycopersicum HOM05D005327 ORTHO05D006655 2.4e-46 189.1 166 60.8
Sopen07g005500 Solanum pennellii HOM05D005327 ORTHO05D006655 2.4e-46 189.1 166 60.8
GSVIVG01035172001 Vitis vinifera HOM05D005327 ORTHO05D006655 3.1e-46 188.7 166 61.4
Rhsim01G0113000 Rhododendron simsii HOM05D005327 ORTHO05D006655 5.3e-46 188.0 166 61.4
Lalb_Chr05g0223671 Lupinus albus HOM05D005327 ORTHO05D006655 1.2e-45 186.8 166 58.4
Cpa.g.sc115.46 Carica papaya HOM05D005327 ORTHO05D006655 1.5e-45 186.4 166 60.8
AUR62021329 Chenopodium quinoa HOM05D005327 ORTHO05D006655 4.5e-45 184.9 166 57.8
HanXRQChr03g0067401 Helianthus annuus HOM05D005327 ORTHO05D006655 5.8e-45 184.5 166 59.6
Lj5A713T18 Lonicera japonica HOM05D005327 ORTHO05D006655 5.8e-45 184.5 166 62.0
Nitab4.5_0004947g0030 Nicotiana tabacum HOM05D005327 ORTHO05D006655 1.0e-44 183.7 166 60.8
AUR62033244 Chenopodium quinoa HOM05D005327 ORTHO05D006655 1.3e-44 183.3 166 58.4
Nn8g41033 Nelumbo nucifera HOM05D005327 ORTHO05D006655 1.7e-44 183.0 144 65.3
Ciclev10008332m.g Citrus clementina HOM05D005327 ORTHO05D006655 2.2e-44 182.6 167 59.3
Gohir.D05G002100 Gossypium hirsutum HOM05D005327 ORTHO05D006655 2.2e-44 182.6 166 60.2
Gorai.009G002000 Gossypium raimondii HOM05D005327 ORTHO05D006655 2.2e-44 182.6 166 60.2
SGA_v2.0_scaffold31G12725 Striga asiatica HOM05D005327 ORTHO05D006655 3.8e-44 181.8 166 59.6
Actinidia02486 Actinidia chinensis HOM05D005327 ORTHO05D006655 4.9e-44 181.4 166 60.2
MSTRG.19391 Avicennia marina HOM05D005327 ORTHO05D006655 4.9e-44 181.4 166 59.0
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 6.5e-44 181.0 166 59.6
Haze_19034 Corylus avellana HOM05D005327 ORTHO05D006655 1.1e-43 180.3 182 56.6
DCAR_019096 Daucus carota HOM05D005327 ORTHO05D006655 1.1e-43 180.3 166 59.6
Lj4g0024487 Lotus japonicus HOM05D005327 ORTHO05D006655 1.1e-43 180.3 166 59.0
Potri.006G070500 Populus trichocarpa HOM05D005327 ORTHO05D006655 1.4e-43 179.9 166 59.0
PSO063G6174 Papaver somniferum HOM05D005327 ORTHO05D006655 2.5e-43 179.1 166 58.4
PSO170G4496 Papaver somniferum HOM05D005327 ORTHO05D006655 2.5e-43 179.1 169 59.2
CARHR085280 Cardamine hirsuta HOM05D005327 ORTHO05D006655 3.2e-43 178.7 166 60.2
CiPaw.15G154300 Carya illinoinensis HOM05D005327 ORTHO05D006655 3.2e-43 178.7 182 55.5
Migut.J00826 Erythranthe guttata HOM05D005327 ORTHO05D006655 3.2e-43 178.7 168 60.1
Psat7g020320 Pisum sativum HOM05D005327 ORTHO05D006655 3.2e-43 178.7 166 58.4
Aa31LG3G3560 Aethionema arabicum HOM05D005327 ORTHO05D006655 7.1e-43 177.6 166 60.2
THA.LOC104826954 Tarenaya hassleriana HOM05D005327 ORTHO05D006655 7.1e-43 177.6 166 59.6
Medtr8g101540 Medicago truncatula HOM05D005327 ORTHO05D006655 9.3e-43 177.2 166 57.2
AL3G22170 Arabidopsis lyrata HOM05D005327 ORTHO05D006655 1.6e-42 176.4 166 59.0
TWI34G0155 Tripterygium wilfordii HOM05D005327 ORTHO05D006655 2.1e-42 176.0 166 58.4
AT3G10700 Arabidopsis thaliana HOM05D005327 ORTHO05D006655 2.7e-42 175.6 166 59.0
Phvul.002G303800 Phaseolus vulgaris HOM05D005327 ORTHO05D006655 3.5e-42 175.3 166 58.4
arahy.Tifrunner.gnm1.ann1.BX5CIC Arachis hypogaea HOM05D005327 ORTHO05D006655 4.6e-42 174.9 166 58.4
Carub.0003s0993 Capsella rubella HOM05D005327 ORTHO05D006655 6.0e-42 174.5 166 59.0
Ca_17407_v3 Cicer arietinum L. HOM05D005327 ORTHO05D006655 6.0e-42 174.5 166 56.0
Glyma.05G222000 Glycine max HOM05D005327 ORTHO05D006655 6.0e-42 174.5 166 58.4
Sc14g0001350 Simmondsia chinensis HOM05D005327 ORTHO05D006655 7.9e-42 174.1 166 55.4
Ah.11g044360 Amaranthus hybridus HOM05D005327 ORTHO05D006655 1.0e-41 173.7 167 58.1
Aqoxy7G02706 Aquilegia oxysepala HOM05D005327 ORTHO05D006655 1.0e-41 173.7 166 57.8
Glyma.08G028600 Glycine max HOM05D005327 ORTHO05D006655 1.0e-41 173.7 166 57.2
arahy.Tifrunner.gnm1.ann1.X8NFG9 Arachis hypogaea HOM05D005327 ORTHO05D006655 1.3e-41 173.3 166 57.8
Sed0022639 Sechium edule HOM05D005327 ORTHO05D006655 1.3e-41 173.3 166 57.8
unitig_749.g14193 Utricularia gibba HOM05D005327 ORTHO05D006655 2.3e-41 172.6 166 58.4
Lsat_1_v5_gn_7_59540 Lactuca sativa HOM05D005327 ORTHO05D006655 3.0e-41 172.2 166 57.8
ClCG06G013980 Citrullus lanatus HOM05D005327 ORTHO05D006655 8.7e-41 170.6 166 56.0
CsaV3_1G032190 Cucumis sativus L. HOM05D005327 ORTHO05D006655 1.1e-40 170.2 166 56.6
Thhalv10020814m.g Eutrema salsugineum HOM05D005327 ORTHO05D006655 1.5e-40 169.9 166 57.2
Manes.15G099200 Manihot esculenta HOM05D005327 ORTHO05D006655 1.9e-40 169.5 166 54.8
RcHm_v2.0_Chr4g0398191 Rosa chinensis HOM05D005327 ORTHO05D006655 2.5e-40 169.1 166 57.8
MELO3C017398.2 Cucumis melo HOM05D005327 ORTHO05D006655 3.3e-40 168.7 169 56.8
Sabra06G0052400 Salix brachista HOM05D005327 ORTHO05D006655 3.3e-40 168.7 191 52.4
ECA240G0405 Erigeron canadensis HOM05D005327 ORTHO05D006655 4.3e-40 168.3 166 58.4
MD16G1240500 Malus domestica HOM05D005327 ORTHO05D006655 5.7e-40 167.9 167 58.1
Prupe.1G067200 Prunus persica HOM05D005327 ORTHO05D006655 5.7e-40 167.9 167 57.5
ATR0626G140 Amborella trichopoda HOM05D005327 ORTHO05D006655 9.7e-40 167.2 166 56.6
CDE06G0639 Ceratophyllum demersum HOM05D005327 ORTHO05D006655 1.3e-39 166.8 144 60.4
MD13G1235800 Malus domestica HOM05D005327 ORTHO05D006655 2.2e-39 166.0 166 57.2
BraA05t22640Z Brassica rapa HOM05D005327 ORTHO05D006655 3.7e-39 165.2 166 57.2
A05p38490 Brassica napus HOM05D005327 ORTHO05D006655 4.8e-39 164.9 166 57.2
Sp3g09020 Schrenkiella parvula HOM05D005327 ORTHO05D006655 4.8e-39 164.9 166 56.6
C05p57390 Brassica napus HOM05D005327 ORTHO05D006655 3.1e-38 162.2 166 56.6
FvH4_4g06430 Fragaria vesca HOM05D005327 ORTHO05D006655 4.1e-38 161.8 166 54.8
FAN12G0339 Fragaria x ananassa HOM05D005327 ORTHO05D006655 4.1e-38 161.8 166 54.8
FAN07G1666 Fragaria x ananassa HOM05D005327 ORTHO05D006655 9.0e-38 160.6 166 54.8
Peaxi162Scf00889g00111 Petunia axillaris HOM05D005327 ORTHO05D006655 9.0e-38 160.6 219 47.0
Hund09044 Selenicereus undatus HOM05D005327 ORTHO05D006655 2.0e-37 159.5 200 47.5
EL10Ac8g18314 Beta vulgaris HOM05D005327 ORTHO05D006655 1.3e-36 156.8 220 43.6
FAN22G1263 Fragaria x ananassa HOM05D005327 ORTHO05D006655 2.2e-36 156.0 166 53.6
TPR.G25461 Trifolium pratense HOM05D005327 ORTHO05D006655 2.7e-34 149.1 148 56.8
vmacro20765 Vaccinium macrocarpon HOM05D005327 ORTHO05D006655 2.3e-33 146.0 262 38.5
Sed0024331 Sechium edule HOM05D005327 ORTHO05D006655 6.7e-33 144.4 172 50.0
SEGI_37801 Sequoiadendron giganteum HOM05D005327 ORTHO05D006655 1.9e-32 142.9 167 48.5
CBR_g4778 Chara braunii HOM05D005327 ORTHO05D000002 4.1e-30 135.2 182 46.2
BolC5t34395H Brassica oleracea HOM05D005327 ORTHO05D006655 6.9e-30 134.4 149 53.0
Zm00001eb071360 Zea mays HOM05D005327 ORTHO05D006655 1.0e-28 130.6 166 46.4
Os04g0608100 Oryza sativa ssp. japonica HOM05D005327 ORTHO05D006655 1.7e-28 129.8 166 45.2
Pp3c23_15130 Physcomitrium patens HOM05D005327 ORTHO05D006655 2.9e-28 129.0 166 45.8
Nitab4.5_0000053g0140 Nicotiana tabacum HOM05D005327 ORTHO05D006655 9.4e-27 124.0 137 55.5
HPP92_000193 Vanilla planifolia HOM05D005327 ORTHO05D006655 1.6e-26 123.2 144 52.1
Oeu011821.1 Olea europaea HOM05D005327 ORTHO05D006655 2.7e-26 122.5 133 52.6
Mapoly0128s0021 Marchantia polymorpha HOM05D005327 ORTHO05D006655 1.4e-25 120.2 166 42.2
AagrBONN_evm.TU.Sc2ySwM_344.300 Anthoceros agrestis HOM05D005327 ORTHO05D006655 3.0e-25 119.0 191 41.4
SMO356G0298 Selaginella moellendorffii HOM05D005327 ORTHO05D006655 2.0e-24 116.3 165 40.6
unitig_77.g31482 Utricularia gibba HOM05D005327 ORTHO05D006655 3.7e-23 112.1 133 50.4
Thhalv10026961m.g Eutrema salsugineum HOM05D005327 ORTHO05D006655 8.2e-23 110.9 62 83.9
SalBow6G3212 Salvia bowleyana HOM05D005327 ORTHO05D006655 5.3e-22 108.2 181 40.3
VMungo0251G1981 Vigna mungo HOM05D005327 ORTHO05D006655 3.4e-21 105.5 60 83.3
CAN.G33.6 Capsicum annuum HOM05D005327 ORTHO05D006655 4.5e-21 105.1 56 87.5
Gohir.A05G001832 Gossypium hirsutum HOM05D005327 ORTHO05D006655 3.0e-17 92.4 111 49.5
HPP92_000244 Vanilla planifolia HOM05D005327 ORTHO05D006655 3.5e-13 79.0 108 43.5
COL.COLO4_23452 Corchorus olitorius HOM05D005327 ORTHO05D006655 6.5e-12 74.7 135 36.3
Sopen00g011970 Solanum pennellii HOM05D005327 ORTHO05D006655 1.2e-10 70.5 36 86.1
QL11p009789 Quercus lobata HOM05D005327 ORTHO05D006655 8.0e-10 67.8 146 34.9
Solyc09g031880.3 Solanum lycopersicum HOM05D005327 ORTHO05D006655 1.8e-09 66.6 115 40.0
CSS0006230 Camellia sinensis var. sinensis HOM05D005327 ORTHO05D006655 6.7e-09 64.7 33 90.9
QL11p009748 Quercus lobata HOM05D005327 ORTHO05D000004 1.5e-08 63.5 35 85.7
SHI03089 Sapria himalayana HOM05D005327 ORTHO05D006655 3.3e-08 62.4 35 80.0
Solyc09g031890.3 Solanum lycopersicum HOM05D005327 ORTHO05D006655 1.1e-06 57.4 58 50.0


User provided reference genes

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