Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G1390 Punica granatum HOM05D006684 ORTHO05D008443 7.0e-120 434.1 240 100.0
GSVIVG01027546001 Vitis vinifera HOM05D006684 ORTHO05D008443 2.0e-50 203.4 244 51.2
CSS0020305 Camellia sinensis var. sinensis HOM05D006684 ORTHO05D008443 3.0e-46 189.5 241 50.2
Cpa.g.sc18.149 Carica papaya HOM05D006684 ORTHO05D008443 3.9e-46 189.1 238 51.3
MELO3C022508.2 Cucumis melo HOM05D006684 ORTHO05D008443 5.6e-45 185.3 235 50.6
Ciclev10022036m.g Citrus clementina HOM05D006684 ORTHO05D008443 8.1e-44 181.4 237 50.2
Dinv32395 Davidia involucrata HOM05D006684 ORTHO05D008443 3.1e-43 179.5 247 48.2
Cfa010232 Carpinus fangiana HOM05D006684 ORTHO05D008443 1.5e-42 177.2 237 46.8
Atru.chr5.338 Acer truncatum HOM05D006684 ORTHO05D008443 2.6e-42 176.4 235 48.9
Eucgr.E01357 Eucalyptus grandis HOM05D006684 ORTHO05D008443 2.6e-42 176.4 241 46.9
Gohir.D11G086900 Gossypium hirsutum HOM05D006684 ORTHO05D008443 4.5e-42 175.6 237 51.9
TAR636G0929 Trochodendron aralioides HOM05D006684 ORTHO05D008443 4.5e-42 175.6 247 46.6
Gorai.007G092800 Gossypium raimondii HOM05D006684 ORTHO05D008443 1.3e-41 174.1 237 51.5
COL.COLO4_12585 Corchorus olitorius HOM05D006684 ORTHO05D008443 2.9e-41 172.9 236 47.0
Nitab4.5_0010110g0010 Nicotiana tabacum HOM05D006684 ORTHO05D008443 4.2e-40 169.1 245 48.2
Sed0022399 Sechium edule HOM05D006684 ORTHO05D008443 4.2e-40 169.1 235 46.8
CsaV3_6G006090 Cucumis sativus L. HOM05D006684 ORTHO05D008443 9.3e-40 167.9 232 48.3
Gohir.A11G082800 Gossypium hirsutum HOM05D006684 ORTHO05D008443 6.0e-39 165.2 235 52.8
CiPaw.01G260000 Carya illinoinensis HOM05D006684 ORTHO05D008443 7.9e-39 164.9 230 45.7
TWI59G0969 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 7.9e-39 164.9 238 49.6
Manes.05G043400 Manihot esculenta HOM05D006684 ORTHO05D008443 1.3e-38 164.1 240 49.6
PGSC0003DMG400021635 Solanum tuberosum HOM05D006684 ORTHO05D008443 1.8e-38 163.7 241 46.5
Sopen05g028070 Solanum pennellii HOM05D006684 ORTHO05D008443 1.1e-37 161.0 241 45.6
LjContig00136g0018410 Lotus japonicus HOM05D006684 ORTHO05D008443 4.3e-37 159.1 235 41.7
Lalb_Chr03g0039091 Lupinus albus HOM05D006684 ORTHO05D008443 5.6e-37 158.7 239 45.6
THA.LOC104801995 Tarenaya hassleriana HOM05D006684 ORTHO05D008443 9.6e-37 157.9 241 48.5
Aqoxy7G00540 Aquilegia oxysepala HOM05D006684 ORTHO05D008443 1.3e-36 157.5 239 44.4
EL10Ac1g00926 Beta vulgaris HOM05D006684 ORTHO05D008443 1.3e-36 157.5 239 44.4
Prupe.2G148900 Prunus persica HOM05D006684 ORTHO05D008443 1.3e-36 157.5 233 41.6
Nn6g34351 Nelumbo nucifera HOM05D006684 ORTHO05D008443 1.6e-36 157.1 241 42.3
QL08p051764 Quercus lobata HOM05D006684 ORTHO05D008443 2.1e-36 156.8 241 44.8
Medtr7g075640 Medicago truncatula HOM05D006684 ORTHO05D008443 2.8e-36 156.4 235 46.4
VMungo1383G3715 Vigna mungo HOM05D006684 ORTHO05D008443 4.8e-36 155.6 236 46.6
Cc02_g36430 Coffea canephora HOM05D006684 ORTHO05D008443 6.2e-36 155.2 239 44.8
Glyma.09G267200 Glycine max HOM05D006684 ORTHO05D008443 8.2e-36 154.8 245 44.5
MSTRG.4882 Avicennia marina HOM05D006684 ORTHO05D008443 1.1e-35 154.5 239 45.2
arahy.Tifrunner.gnm1.ann1.3Z62KU Arachis hypogaea HOM05D006684 ORTHO05D008443 4.0e-35 152.5 236 44.9
TPR.G37765 Trifolium pratense HOM05D006684 ORTHO05D008443 4.0e-35 152.5 235 46.8
Sp4g27550 Schrenkiella parvula HOM05D006684 ORTHO05D008443 5.3e-35 152.1 242 41.7
C04p71620 Brassica napus HOM05D000147 ORTHO05D007841 6.9e-35 151.8 236 40.7
Thhalv10001611m.g Eutrema salsugineum HOM05D006684 ORTHO05D008443 6.9e-35 151.8 243 41.2
arahy.Tifrunner.gnm1.ann1.CFQ18P Arachis hypogaea HOM05D006684 ORTHO05D008443 1.2e-34 151.0 241 46.1
Manes.12G048300 Manihot esculenta HOM05D006684 ORTHO05D008443 2.0e-34 150.2 244 39.8
Thecc.01G373000 Theobroma cacao HOM05D006684 ORTHO05D008443 3.4e-34 149.4 240 44.6
CDE04G1869 Ceratophyllum demersum HOM05D006684 ORTHO05D008443 7.6e-34 148.3 240 40.8
ClCG06G000300 Citrullus lanatus HOM05D006684 ORTHO05D008443 7.6e-34 148.3 279 38.4
Phvul.008G074700 Phaseolus vulgaris HOM05D006684 ORTHO05D008443 1.0e-33 147.9 239 45.2
BcaB06g29418 Brassica carinata HOM05D006684 ORTHO05D008443 1.7e-33 147.1 244 40.2
BolC4t28667H Brassica oleracea HOM05D000147 ORTHO05D007841 6.5e-33 145.2 240 40.0
Hund17005 Selenicereus undatus HOM05D006684 ORTHO05D008443 6.5e-33 145.2 242 38.8
BraA04t18849Z Brassica rapa HOM05D000147 ORTHO05D007841 8.4e-33 144.8 236 38.6
Os06g0129800 Oryza sativa ssp. japonica HOM05D006684 ORTHO05D008443 1.9e-32 143.7 236 42.4
BcaC02g07085 Brassica carinata HOM05D006684 ORTHO05D008443 9.3e-32 141.4 235 39.6
AUR62004244 Chenopodium quinoa HOM05D006684 ORTHO05D008443 9.3e-32 141.4 218 39.9
CANSAT94G0012 Cannabis sativa HOM05D006684 ORTHO05D008443 1.6e-31 140.6 231 42.9
Duzib133G0994 Durio zibethinus HOM05D006684 ORTHO05D008443 2.7e-31 139.8 228 42.1
Aa31LG1G27020 Aethionema arabicum HOM05D006684 ORTHO05D008443 4.6e-31 139.0 238 39.9
ECA240G0119 Erigeron canadensis HOM05D006684 ORTHO05D008443 4.6e-31 139.0 234 41.9
MD02G1199700 Malus domestica HOM05D006684 ORTHO05D008443 6.0e-31 138.7 234 40.6
Hma1.2p1_0053F.1_g030880 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 1.0e-30 137.9 243 41.6
AL4G44700 Arabidopsis lyrata HOM05D006684 ORTHO05D008443 2.3e-30 136.7 234 40.2
RcHm_v2.0_Chr1g0351131 Rosa chinensis HOM05D006684 ORTHO05D008443 3.9e-30 136.0 239 40.2
FvH4_7g12340 Fragaria vesca HOM05D006684 ORTHO05D008443 1.1e-29 134.4 234 41.5
FAN06G2821 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.1e-29 134.4 234 41.5
FAN06G3889 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.1e-29 134.4 234 41.5
Zm00001eb378390 Zea mays HOM05D006684 ORTHO05D008443 1.9e-29 133.7 243 40.3
SGA_v2.0_scaffold11G05605 Striga asiatica HOM05D006684 ORTHO05D008443 2.2e-28 130.2 230 40.0
CARHR140710 Cardamine hirsuta HOM05D006684 ORTHO05D008443 3.7e-28 129.4 240 40.0
SalBow5G0966 Salvia bowleyana HOM05D006684 ORTHO05D008443 3.7e-28 129.4 236 45.3
Carub.0004s2814 Capsella rubella HOM05D006684 ORTHO05D008443 4.8e-28 129.0 242 39.3
FAN01G2432 Fragaria x ananassa HOM05D006684 ORTHO05D008443 4.8e-28 129.0 231 41.1
SalBow5G5079 Salvia bowleyana HOM05D006684 ORTHO05D008443 4.8e-28 129.0 237 46.0
A04p33890 Brassica napus HOM05D000147 ORTHO05D007841 1.1e-27 127.9 234 36.3
FAN10G0264 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.1e-27 127.9 234 39.7
Manes.12G048301 Manihot esculenta HOM05D006684 ORTHO05D008443 1.8e-27 127.1 236 37.7
HanXRQChr03g0093671 Helianthus annuus HOM05D006684 ORTHO05D008443 3.1e-27 126.3 232 43.1
Nitab4.5_0001702g0200 Nicotiana tabacum HOM05D006684 ORTHO05D008443 4.1e-27 125.9 238 43.7
AUR62013604 Chenopodium quinoa HOM05D006684 ORTHO05D008443 9.0e-27 124.8 232 36.6
Potri.014G072400 Populus trichocarpa HOM05D006684 ORTHO05D008443 1.2e-26 124.4 237 40.5
AT2G45520 Arabidopsis thaliana HOM05D006684 ORTHO05D008443 2.0e-26 123.6 238 38.7
BolC4t22271H Brassica oleracea HOM05D006684 ORTHO05D008443 3.4e-26 122.9 228 39.9
FAN03G1779 Fragaria x ananassa HOM05D006684 ORTHO05D008443 7.6e-26 121.7 244 37.7
Manes.12G053501 Manihot esculenta HOM05D006684 ORTHO05D008443 7.6e-26 121.7 236 36.9
Peaxi162Scf00207g00165 Petunia axillaris HOM05D006684 ORTHO05D008443 1.3e-25 120.9 237 38.4
Lsat_1_v5_gn_3_135520 Lactuca sativa HOM05D006684 ORTHO05D008443 2.9e-25 119.8 234 44.0
CAN.G333.1 Capsicum annuum HOM05D006684 ORTHO05D008443 5.0e-25 119.0 241 38.2
Sc02g0002410 Simmondsia chinensis HOM05D006684 ORTHO05D008443 1.1e-24 117.9 214 38.8
FAN10G2097 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.9e-24 117.1 231 36.8
Rhsim01G0161500 Rhododendron simsii HOM05D006684 ORTHO05D008443 2.7e-23 113.2 113 55.8
Duzib138G0092 Durio zibethinus HOM05D006684 ORTHO05D008443 4.6e-23 112.5 181 42.5
SEGI_35511 Sequoiadendron giganteum HOM05D006684 ORTHO05D008443 7.9e-23 111.7 237 39.7
BraA05t19524Z Brassica rapa HOM05D006684 ORTHO05D008443 1.0e-22 111.3 225 37.3
PSO478G1842 Papaver somniferum HOM05D006684 ORTHO05D008443 1.0e-22 111.3 245 39.2
Solyc05g048750.3 Solanum lycopersicum HOM05D006684 ORTHO05D008443 3.9e-22 109.4 132 52.3
vmacro20994 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 3.9e-22 109.4 352 31.8
Duzib138G0657 Durio zibethinus HOM05D006684 ORTHO05D008443 2.5e-21 106.7 155 45.2
Psat3g104080 Pisum sativum HOM05D006684 ORTHO05D008443 3.7e-20 102.8 74 62.2
Oeu036610.1 Olea europaea HOM05D006684 ORTHO05D008443 1.1e-19 101.3 72 66.7
Ca_07836_v3 Cicer arietinum L. HOM05D006684 ORTHO05D008443 5.3e-19 99.0 71 60.6
Haze_16738 Corylus avellana HOM05D006684 ORTHO05D008443 2.6e-18 96.7 138 45.7
vmacro20995 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 2.6e-18 96.7 78 60.3
ATR0757G101 Amborella trichopoda HOM05D006684 ORTHO05D008443 3.4e-18 96.3 190 39.5
Migut.N01586 Erythranthe guttata HOM05D006684 ORTHO05D008443 3.4e-18 96.3 133 47.4
Haze_16739 Corylus avellana HOM05D006684 ORTHO05D008443 5.9e-18 95.5 68 67.6
TWI23G1019 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 5.9e-18 95.5 113 55.8
Ah.07g198740 Amaranthus hybridus HOM05D006684 ORTHO05D008443 1.3e-17 94.4 204 35.3
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 6.5e-17 92.0 160 40.0
PSO782G3084 Papaver somniferum HOM05D006684 ORTHO05D008443 9.4e-16 88.2 183 39.9
MBI12_g38018_MAGBIO Magnolia biondii HOM05D006684 ORTHO05D008443 2.1e-15 87.0 145 43.4
Actinidia33456 Actinidia chinensis HOM05D006684 ORTHO05D008443 3.9e-14 82.8 147 39.5
Pp3c22_10350 Physcomitrium patens HOM05D006684 ORTHO05D008443 8.8e-14 81.6 242 29.8
unitig_578.g16483 Utricularia gibba HOM05D006684 ORTHO05D008443 3.3e-13 79.7 208 42.3
Mapoly0084s0081 Marchantia polymorpha HOM05D006684 ORTHO05D008443 4.4e-13 79.3 247 30.0
SGA_v2.0_scaffold43G16466 Striga asiatica HOM05D006684 ORTHO05D008443 1.4e-11 74.3 123 39.8
Zm00001eb269540 Zea mays HOM05D006684 ORTHO05D008443 1.5e-10 70.9 78 53.8
AagrBONN_evm.TU.Sc2ySwM_344.4110 Anthoceros agrestis HOM05D006684 ORTHO05D008443 2.6e-10 70.1 234 30.3
SMO347G0023 Selaginella moellendorffii HOM05D006684 ORTHO05D008443 2.9e-09 66.6 225 28.4
HPP92_020257 Vanilla planifolia HOM05D006684 ORTHO05D008443 6.7e-06 55.5 211 28.9


User provided reference genes

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