Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G2641 Punica granatum HOM05D005965 ORTHO05D007283 6.4e-260 900.2 450 100.0
Eucgr.H04531 Eucalyptus grandis HOM05D005965 ORTHO05D007283 3.4e-176 622.1 435 72.6
GSVIVG01031150001 Vitis vinifera HOM05D005965 ORTHO05D007283 7.8e-173 610.9 447 69.1
MD04G1201200 Malus domestica HOM05D005965 ORTHO05D007283 2.1e-170 602.8 451 67.8
CiPaw.07G021000 Carya illinoinensis HOM05D005965 ORTHO05D007283 2.0e-168 596.3 450 67.3
Prupe.6G321300 Prunus persica HOM05D005965 ORTHO05D007283 1.7e-167 593.2 444 67.3
CSS0001755 Camellia sinensis var. sinensis HOM05D005965 ORTHO05D007283 1.1e-166 590.5 450 67.6
QL03p021207 Quercus lobata HOM05D005965 ORTHO05D007283 7.1e-166 587.8 447 68.0
Atru.chr2.26 Acer truncatum HOM05D005965 ORTHO05D007283 1.2e-165 587.0 468 65.4
Oeu043357.2 Olea europaea HOM05D005965 ORTHO05D007283 1.7e-164 583.2 446 66.1
Gohir.D11G277600 Gossypium hirsutum HOM05D005965 ORTHO05D007283 1.1e-163 580.5 452 66.2
Sabra13G0016500 Salix brachista HOM05D005965 ORTHO05D007283 1.1e-163 580.5 455 66.2
Actinidia21493 Actinidia chinensis HOM05D005965 ORTHO05D007283 1.5e-163 580.1 448 65.8
Cfa006624 Carpinus fangiana HOM05D005965 ORTHO05D007283 1.9e-163 579.7 456 66.7
Gorai.007G299800 Gossypium raimondii HOM05D005965 ORTHO05D007283 4.3e-163 578.6 464 65.3
Rhsim05G0139400 Rhododendron simsii HOM05D005965 ORTHO05D007283 1.2e-162 577.0 487 62.0
Potri.013G017500 Populus trichocarpa HOM05D005965 ORTHO05D007283 1.6e-162 576.6 454 66.5
Lj1g0019406 Lotus japonicus HOM05D005965 ORTHO05D007283 3.1e-161 572.4 449 64.6
TWI12G0462 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 6.8e-161 571.2 450 67.8
Medtr7g113100 Medicago truncatula HOM05D005965 ORTHO05D007283 4.4e-160 568.5 451 64.5
Cpa.g.sc48.91 Carica papaya HOM05D005965 ORTHO05D007283 6.4e-159 564.7 435 67.8
ClCG02G015450 Citrullus lanatus HOM05D005965 ORTHO05D007283 1.1e-158 563.9 453 64.7
CsaV3_2G006620 Cucumis sativus L. HOM05D005965 ORTHO05D007283 2.4e-158 562.8 455 63.5
Sabra13G0020500 Salix brachista HOM05D005965 ORTHO05D007283 7.1e-158 561.2 426 67.4
MSTRG.20421 Avicennia marina HOM05D005965 ORTHO05D007283 9.2e-158 560.8 442 64.9
Manes.08G118100 Manihot esculenta HOM05D005965 ORTHO05D007283 1.2e-157 560.5 448 64.1
Sed0024378 Sechium edule HOM05D005965 ORTHO05D007283 2.1e-157 559.7 456 63.4
Ciclev10001128m.g Citrus clementina HOM05D005965 ORTHO05D007283 1.7e-156 556.6 452 64.2
TPR.G33209 Trifolium pratense HOM05D005965 ORTHO05D007283 5.6e-155 551.6 452 63.1
Cc02_g33090 Coffea canephora HOM05D005965 ORTHO05D007283 9.6e-155 550.8 446 63.9
Lalb_Chr18g0045721 Lupinus albus HOM05D005965 ORTHO05D007283 9.6e-155 550.8 451 62.5
Sc16g0008610 Simmondsia chinensis HOM05D005965 ORTHO05D007283 3.6e-154 548.9 445 61.8
Gohir.A11G267700 Gossypium hirsutum HOM05D005965 ORTHO05D007283 1.1e-153 547.4 451 63.4
DCAR_003352 Daucus carota HOM05D005965 ORTHO05D007283 1.8e-153 546.6 469 59.5
Aqoxy2G02987 Aquilegia oxysepala HOM05D005965 ORTHO05D007283 4.0e-153 545.4 452 62.4
TAR362G0609 Trochodendron aralioides HOM05D005965 ORTHO05D007283 4.0e-153 545.4 448 62.9
EL10Ac4g09921 Beta vulgaris HOM05D005965 ORTHO05D007283 2.6e-152 542.7 451 61.0
Psat0s4314g0040 Pisum sativum HOM05D005965 ORTHO05D007283 4.4e-152 542.0 475 60.0
RcHm_v2.0_Chr3g0455661 Rosa chinensis HOM05D005965 ORTHO05D007283 9.9e-152 540.8 452 62.6
Eucgr.H04558 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.2e-151 539.7 433 65.1
arahy.Tifrunner.gnm1.ann1.DHC6FB Arachis hypogaea HOM05D005965 ORTHO05D007283 8.4e-151 537.7 439 64.2
Dinv40342 Davidia involucrata HOM05D005965 ORTHO05D007283 8.4e-151 537.7 339 77.0
arahy.Tifrunner.gnm1.ann1.79NSX3 Arachis hypogaea HOM05D005965 ORTHO05D007283 1.9e-150 536.6 439 64.2
Migut.G01001 Erythranthe guttata HOM05D005965 ORTHO05D007283 1.9e-150 536.6 446 62.3
THA.LOC104818713 Tarenaya hassleriana HOM05D005965 ORTHO05D007283 3.2e-150 535.8 454 60.8
PSO151G0070 Papaver somniferum HOM05D005965 ORTHO05D007283 5.4e-150 535.0 448 62.1
Hma1.2p1_1292F.1_g273670 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 1.6e-149 533.5 339 76.1
FAN14G0885 Fragaria x ananassa HOM05D005965 ORTHO05D007283 2.7e-149 532.7 451 61.4
Hund07094 Selenicereus undatus HOM05D005965 ORTHO05D007283 2.7e-149 532.7 459 61.9
COL.COLO4_10514 Corchorus olitorius HOM05D005965 ORTHO05D007283 3.5e-149 532.3 382 69.6
vmacro19747 Vaccinium macrocarpon HOM05D005965 ORTHO05D007283 1.0e-148 530.8 397 67.8
ECA246G4331 Erigeron canadensis HOM05D005965 ORTHO05D007283 1.7e-148 530.0 449 63.3
PGSC0003DMG400007478 Solanum tuberosum HOM05D005965 ORTHO05D007283 8.7e-148 527.7 444 60.8
Sopen10g013470 Solanum pennellii HOM05D005965 ORTHO05D007283 1.1e-147 527.3 444 61.0
Carub.0003s0477 Capsella rubella HOM05D005965 ORTHO05D007283 2.5e-147 526.2 446 60.5
Nn3g21434 Nelumbo nucifera HOM05D005965 ORTHO05D007283 7.3e-147 524.6 447 61.3
Glyma.19G233800 Glycine max HOM05D005965 ORTHO05D007283 9.6e-147 524.2 450 62.0
Solyc10g044780.2 Solanum lycopersicum HOM05D005965 ORTHO05D007283 9.6e-147 524.2 444 60.6
Thhalv10020753m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 1.3e-146 523.9 446 60.1
VMungo0540G0496 Vigna mungo HOM05D005965 ORTHO05D007283 1.3e-146 523.9 450 60.9
AT3G05480 Arabidopsis thaliana HOM05D005965 ORTHO05D007283 1.6e-146 523.5 446 59.9
unitig_699.g19668 Utricularia gibba HOM05D005965 ORTHO05D007283 1.6e-146 523.5 446 59.9
Peaxi162Scf00949g00112 Petunia axillaris HOM05D005965 ORTHO05D007283 3.6e-146 522.3 444 61.5
Glyma.03G236100 Glycine max HOM05D005965 ORTHO05D007283 4.8e-146 521.9 450 61.6
CAN.G1.32 Capsicum annuum HOM05D005965 ORTHO05D007283 1.4e-145 520.4 444 59.9
Phvul.006G090000 Phaseolus vulgaris HOM05D005965 ORTHO05D007283 2.4e-145 519.6 437 62.7
AL3G16080 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 3.1e-145 519.2 446 59.6
Nitab4.5_0001129g0130 Nicotiana tabacum HOM05D005965 ORTHO05D007283 2.0e-144 516.5 457 60.2
Ah.04g161100 Amaranthus hybridus HOM05D005965 ORTHO05D007283 2.2e-143 513.1 449 60.1
Sp3g04310 Schrenkiella parvula HOM05D005965 ORTHO05D007283 2.2e-143 513.1 453 58.1
BcaC05g30118 Brassica carinata HOM05D005965 ORTHO05D007283 2.9e-143 512.7 446 59.4
FAN02G0246 Fragaria x ananassa HOM05D005965 ORTHO05D007283 3.8e-143 512.3 452 59.5
C05p61750 Brassica napus HOM05D005965 ORTHO05D007283 4.2e-142 508.8 448 59.2
Lsat_1_v5_gn_9_124801 Lactuca sativa HOM05D005965 ORTHO05D007283 4.6e-141 505.4 455 60.2
MBI19_g29225_MAGBIO Magnolia biondii HOM05D005965 ORTHO05D007283 3.0e-140 502.7 457 58.9
Lj9A144T46 Lonicera japonica HOM05D005965 ORTHO05D007283 1.9e-139 500.0 339 72.0
HanXRQChr03g0072671 Helianthus annuus HOM05D005965 ORTHO05D007283 1.6e-138 496.9 447 60.4
Ca_05803_v3 Cicer arietinum L. HOM05D005965 ORTHO05D007283 2.8e-138 496.1 408 62.5
BolC5t34833H Brassica oleracea HOM05D005965 ORTHO05D007283 8.1e-138 494.6 463 56.8
Hma1.2p1_1292F.1_g273680 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 8.1e-138 494.6 336 72.3
BcaC05g30164 Brassica carinata HOM05D005965 ORTHO05D007283 1.1e-137 494.2 472 56.1
Aa31LG5G15920 Aethionema arabicum HOM05D005965 ORTHO05D007283 2.4e-137 493.0 500 54.2
FvH4_6g06510 Fragaria vesca HOM05D005965 ORTHO05D007283 2.6e-136 489.6 382 65.2
HanXRQChr03g0072661 Helianthus annuus HOM05D005965 ORTHO05D007283 7.6e-136 488.0 470 57.7
FAN05G3147 Fragaria x ananassa HOM05D005965 ORTHO05D007283 1.7e-135 486.9 382 64.7
Migut.G01092 Erythranthe guttata HOM05D005965 ORTHO05D007283 1.2e-133 480.7 340 69.4
SGA_v2.0_scaffold172G38992 Striga asiatica HOM05D005965 ORTHO05D007283 2.5e-131 473.0 468 55.8
HPP92_000403 Vanilla planifolia HOM05D005965 ORTHO05D007283 2.8e-130 469.5 450 56.9
HPP92_000400 Vanilla planifolia HOM05D005965 ORTHO05D007283 6.2e-130 468.4 454 56.8
AUR62000770 Chenopodium quinoa HOM05D005965 ORTHO05D007283 1.8e-129 466.8 389 63.0
Thecc.05G312500 Theobroma cacao HOM05D005965 ORTHO05D007283 1.4e-126 457.2 372 63.7
ATR0796G244 Amborella trichopoda HOM05D005965 ORTHO05D007283 6.0e-125 451.8 455 51.4
SHI18108 Sapria himalayana HOM05D005965 ORTHO05D007283 1.5e-120 437.2 307 70.4
Haze_04145 Corylus avellana HOM05D005965 ORTHO05D007283 1.5e-115 420.6 255 78.0
Migut.G01320 Erythranthe guttata HOM05D005965 ORTHO05D007283 2.0e-115 420.2 341 63.0
Eucgr.H04576 Eucalyptus grandis HOM05D005965 ORTHO05D007283 3.7e-114 416.0 253 77.9
SEGI_33282 Sequoiadendron giganteum HOM05D005965 ORTHO05D007283 1.4e-113 414.1 473 47.4
AUR62005199 Chenopodium quinoa HOM05D005965 ORTHO05D007283 2.4e-113 413.3 381 56.7
MELO3C031536.2 Cucumis melo HOM05D005965 ORTHO05D007283 1.3e-111 407.5 387 56.8
Eucgr.H04573 Eucalyptus grandis HOM05D005965 ORTHO05D007283 3.9e-108 396.0 388 55.2
CARHR079860 Cardamine hirsuta HOM05D005965 ORTHO05D007283 8.8e-108 394.8 255 72.5
CDE02G1352 Ceratophyllum demersum HOM05D005965 ORTHO05D007283 9.7e-107 391.3 362 56.4
BraA05t23035Z Brassica rapa HOM05D005965 ORTHO05D007283 1.8e-105 387.1 358 55.9
Eucgr.H04556 Eucalyptus grandis HOM05D005965 ORTHO05D007283 8.0e-101 371.7 418 51.4
Os03g0345100 Oryza sativa ssp. japonica HOM05D005965 ORTHO05D007283 3.9e-100 369.4 471 45.4
Mapoly0078s0014 Marchantia polymorpha HOM05D005965 ORTHO05D007283 3.5e-96 356.3 352 53.4
Pp3c7_570 Physcomitrium patens HOM05D005965 ORTHO05D007283 1.9e-94 350.5 392 47.4
Nitab4.5_0001057g0090 Nicotiana tabacum HOM05D005965 ORTHO05D007283 7.2e-94 348.6 351 55.6
SMO134G0282 Selaginella moellendorffii HOM05D005965 ORTHO05D007283 1.2e-91 341.3 343 51.9
Pp3c15_2650 Physcomitrium patens HOM05D005965 ORTHO05D007283 3.4e-91 339.7 383 48.0
Eucgr.H04569 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.0e-88 330.5 437 46.7
SHI32441 Sapria himalayana HOM05D005965 ORTHO05D007283 2.0e-88 330.5 299 59.5
BraA05t19070Z Brassica rapa HOM05D005965 ORTHO05D007283 5.0e-87 325.9 242 64.9
CBR_g180 Chara braunii HOM05D005965 ORTHO05D007283 1.7e-79 300.8 396 43.7
Zm00001eb016590 Zea mays HOM05D005965 ORTHO05D007283 8.9e-76 288.5 333 48.6
Eucgr.H04571 Eucalyptus grandis HOM05D005965 ORTHO05D007283 7.5e-75 285.4 427 42.6
Psat6g098120 Pisum sativum HOM05D005965 ORTHO05D007283 6.4e-50 202.6 163 60.1
Thecc.07G184800 Theobroma cacao HOM05D005965 ORTHO05D007283 1.4e-49 201.4 234 50.4
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 1.2e-48 198.4 260 41.9
Thecc.07G184700 Theobroma cacao HOM05D005965 ORTHO05D007283 5.2e-44 183.0 192 55.2
Thhalv10022144m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 7.6e-43 179.1 246 43.9
MCO01G074 Micromonas commoda HOM05D005965 ORTHO05D007283 2.4e-33 147.5 400 29.8
QL03p021253 Quercus lobata HOM05D005965 ORTHO05D007283 1.0e-31 142.1 93 67.7
PSO017G4250 Papaver somniferum HOM05D005965 ORTHO05D007283 4.3e-30 136.7 122 54.9
Haze_04144 Corylus avellana HOM05D005965 ORTHO05D007283 1.2e-27 128.6 131 61.1
CARHR079870 Cardamine hirsuta HOM05D005965 ORTHO05D007283 9.9e-27 125.6 193 44.6
TAR633G2454 Trochodendron aralioides HOM05D005965 ORTHO05D007283 1.1e-25 122.1 134 51.5
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 9.3e-25 119.0 60 86.7
Cre16.g682950 Chlamydomonas reinhardtii HOM05D005965 ORTHO05D007283 2.7e-24 117.5 224 33.9
Eucgr.H04575 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.7e-24 117.5 125 51.2
Nitab4.5_0000524g0030 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.9e-17 94.7 199 36.7
TWI56G1489 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 2.7e-16 90.9 73 67.1
SMO274G0013 Selaginella moellendorffii HOM05D005965 ORTHO05D376736 3.3e-06 57.4 102 41.2


User provided reference genes

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