Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G2493 Punica granatum HOM05D005806 ORTHO05D007119 3.2e-212 741.9 489 100.0
Manes.15G010100 Manihot esculenta HOM05D005806 ORTHO05D007119 3.7e-104 382.9 470 58.5
Manes.03G199200 Manihot esculenta HOM05D005806 ORTHO05D007119 4.9e-104 382.5 476 59.0
Eucgr.B01574 Eucalyptus grandis HOM05D005806 ORTHO05D007119 3.0e-101 373.2 475 57.3
QL06p010760 Quercus lobata HOM05D005806 ORTHO05D007119 6.2e-99 365.5 477 55.8
TWI09G1342 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 8.9e-98 361.7 476 54.4
Duzib151G0580 Durio zibethinus HOM05D005806 ORTHO05D007119 3.4e-97 359.8 479 53.4
Cpa.g.sc50.151 Carica papaya HOM05D005806 ORTHO05D007119 4.4e-97 359.4 473 59.6
Potri.010G007000 Populus trichocarpa HOM05D005806 ORTHO05D007119 3.8e-96 356.3 467 57.2
Cfa015433 Carpinus fangiana HOM05D005806 ORTHO05D007119 6.4e-96 355.5 469 55.4
Duzib212G0552 Durio zibethinus HOM05D005806 ORTHO05D007119 4.2e-95 352.8 482 52.1
CiPaw.01G145000 Carya illinoinensis HOM05D005806 ORTHO05D007119 7.1e-95 352.1 473 57.1
Haze_01151 Corylus avellana HOM05D005806 ORTHO05D007119 2.7e-94 350.1 473 54.5
CARHR092010 Cardamine hirsuta HOM05D005806 ORTHO05D007119 6.0e-94 349.0 483 50.5
Atru.chr4.2914 Acer truncatum HOM05D005806 ORTHO05D007119 1.1e-92 344.7 466 52.1
CSS0028282 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 1.1e-92 344.7 478 52.3
Ciclev10004804m.g Citrus clementina HOM05D005806 ORTHO05D007119 3.3e-92 343.2 476 54.2
Sabra10G0005700 Salix brachista HOM05D005806 ORTHO05D007119 3.3e-92 343.2 467 54.0
Gorai.011G193400 Gossypium raimondii HOM05D005806 ORTHO05D007119 1.3e-91 341.3 474 52.3
Gohir.D10G172900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 4.8e-91 339.3 475 58.3
Thecc.04G290100 Theobroma cacao HOM05D005806 ORTHO05D007119 6.2e-91 339.0 471 51.8
COL.COLO4_13808 Corchorus olitorius HOM05D005806 ORTHO05D007119 2.4e-90 337.0 489 53.2
TWI73G0620 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 2.0e-89 334.0 467 50.5
Hund20516 Selenicereus undatus HOM05D005806 ORTHO05D007119 3.4e-89 333.2 466 50.9
ClCG05G006280 Citrullus lanatus HOM05D005806 ORTHO05D007119 6.4e-88 328.9 476 47.3
CSS0004144 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 3.2e-87 326.6 474 55.1
MD16G1163000 Malus domestica HOM05D005806 ORTHO05D007119 3.2e-87 326.6 484 47.1
Nitab4.5_0012392g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 3.2e-87 326.6 484 49.0
Prupe.1G130400 Prunus persica HOM05D005806 ORTHO05D007119 3.2e-87 326.6 482 51.0
RcHm_v2.0_Chr4g0423561 Rosa chinensis HOM05D005806 ORTHO05D007119 3.2e-87 326.6 481 53.0
Carub.0003s1647 Capsella rubella HOM05D005806 ORTHO05D007119 4.2e-87 326.2 496 47.4
Aqoxy5G00792 Aquilegia oxysepala HOM05D005806 ORTHO05D007119 5.4e-87 325.9 485 47.8
Solyc01g066050.3 Solanum lycopersicum HOM05D005806 ORTHO05D007119 7.1e-87 325.5 506 46.4
EL10Ac3g06659 Beta vulgaris HOM05D005806 ORTHO05D007119 9.3e-87 325.1 479 49.7
Nitab4.5_0002215g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 1.6e-86 324.3 480 50.6
Lj3A825T23 Lonicera japonica HOM05D005806 ORTHO05D007119 2.1e-86 323.9 479 51.6
CSS0038808 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 3.5e-86 323.2 474 53.8
THA.LOC104802587 Tarenaya hassleriana HOM05D005806 ORTHO05D007119 6.0e-86 322.4 481 51.4
Sopen01g027600 Solanum pennellii HOM05D005806 ORTHO05D007119 1.3e-85 321.2 506 46.2
DCAR_002485 Daucus carota HOM05D005806 ORTHO05D007119 5.1e-85 319.3 470 47.9
Sed0007282 Sechium edule HOM05D005806 ORTHO05D007119 6.6e-85 318.9 477 51.4
Dinv44345 Davidia involucrata HOM05D005806 ORTHO05D007119 1.9e-84 317.4 455 50.8
AT3G16760 Arabidopsis thaliana HOM05D005806 ORTHO05D007119 4.3e-84 316.2 468 46.6
VMungo1215G2854 Vigna mungo HOM05D005806 ORTHO05D007119 4.3e-84 316.2 448 49.6
Sp3g15010 Schrenkiella parvula HOM05D005806 ORTHO05D007119 7.4e-84 315.5 490 45.5
TAR365G0831 Trochodendron aralioides HOM05D005806 ORTHO05D007119 7.4e-84 315.5 467 51.4
GSVIVG01035100001 Vitis vinifera HOM05D005806 ORTHO05D007119 7.4e-84 315.5 469 52.2
FAN07G1609 Fragaria x ananassa HOM05D005806 ORTHO05D007119 4.8e-83 312.8 487 47.2
TAR365G0056 Trochodendron aralioides HOM05D005806 ORTHO05D007119 4.0e-82 309.7 469 51.4
Thhalv10020624m.g Eutrema salsugineum HOM05D005806 ORTHO05D007119 6.9e-82 308.9 461 45.6
FvH4_4g18770 Fragaria vesca HOM05D005806 ORTHO05D007119 6.9e-82 308.9 488 47.7
FAN12G3921 Fragaria x ananassa HOM05D005806 ORTHO05D007119 6.9e-82 308.9 488 47.7
CAN.G14.19 Capsicum annuum HOM05D005806 ORTHO05D007119 1.2e-81 308.1 477 51.8
FAN12G2548 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.2e-81 308.1 488 47.5
Ah.13g074780 Amaranthus hybridus HOM05D005806 ORTHO05D007119 1.5e-81 307.8 482 46.5
Lsat_1_v5_gn_6_78121 Lactuca sativa HOM05D005806 ORTHO05D007119 3.4e-81 306.6 485 45.4
Gohir.A10G166900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 5.8e-81 305.8 478 55.9
BraA01t03813Z Brassica rapa HOM05D005806 ORTHO05D007119 7.6e-81 305.4 480 49.0
Nn3g21558 Nelumbo nucifera HOM05D005806 ORTHO05D007119 7.6e-81 305.4 463 51.4
PGSC0003DMG400016813 Solanum tuberosum HOM05D005806 ORTHO05D007119 7.6e-81 305.4 476 46.8
Oeu054004.1 Olea europaea HOM05D005806 ORTHO05D007119 1.3e-80 304.7 465 51.0
AUR62018055 Chenopodium quinoa HOM05D005806 ORTHO05D007119 3.8e-80 303.1 484 47.3
BolC1t04724H Brassica oleracea HOM05D005806 ORTHO05D007119 6.4e-80 302.4 484 45.0
Glyma.07G244900 Glycine max HOM05D005806 ORTHO05D007119 3.2e-79 300.1 451 47.7
Medtr4g120360 Medicago truncatula HOM05D005806 ORTHO05D007119 1.6e-78 297.7 454 54.6
arahy.Tifrunner.gnm1.ann1.TZ6N57 Arachis hypogaea HOM05D005806 ORTHO05D007119 6.0e-78 295.8 470 45.5
CANSAT78G0145 Cannabis sativa HOM05D005806 ORTHO05D007119 1.3e-77 294.7 478 49.2
Cc03_g01460 Coffea canephora HOM05D005806 ORTHO05D007119 1.8e-77 294.3 480 45.6
A01p37530 Brassica napus HOM05D005806 ORTHO05D007119 2.3e-77 293.9 479 48.2
BcaC09g48634 Brassica carinata HOM05D005806 ORTHO05D007119 3.0e-77 293.5 477 48.0
C01p47550 Brassica napus HOM05D005806 ORTHO05D007119 8.7e-77 292.0 484 44.2
FAN17G0801 Fragaria x ananassa HOM05D005806 ORTHO05D007119 5.6e-76 289.3 475 47.2
Nn4g25745 Nelumbo nucifera HOM05D005806 ORTHO05D007119 5.6e-76 289.3 479 45.3
Phvul.003G107800 Phaseolus vulgaris HOM05D005806 ORTHO05D007119 1.3e-75 288.1 455 51.6
Aa31LG8G3830 Aethionema arabicum HOM05D005806 ORTHO05D007119 1.6e-75 287.7 472 44.1
Lj4g0013254 Lotus japonicus HOM05D005806 ORTHO05D007119 2.1e-75 287.3 454 53.3
Ca_21476_v3 Cicer arietinum L. HOM05D005806 ORTHO05D007119 2.8e-75 287.0 453 49.9
vmacro23238 Vaccinium macrocarpon HOM05D005806 ORTHO05D007119 3.7e-75 286.6 512 42.6
HanXRQChr03g0084151 Helianthus annuus HOM05D005806 ORTHO05D007119 8.1e-75 285.4 518 43.2
SGA_v2.0_scaffold91G28032 Striga asiatica HOM05D005806 ORTHO05D007119 1.4e-74 284.6 484 44.8
MELO3C006687.2 Cucumis melo HOM05D005806 ORTHO05D007119 2.4e-74 283.9 453 50.3
Actinidia40301 Actinidia chinensis HOM05D005806 ORTHO05D007119 9.0e-74 282.0 387 51.2
Peaxi162Scf00065g01121 Petunia axillaris HOM05D005806 ORTHO05D007119 1.2e-73 281.6 496 46.0
Oeu006424.1 Olea europaea HOM05D005806 ORTHO05D007119 4.5e-73 279.6 470 47.7
Glyma.17G028900 Glycine max HOM05D005806 ORTHO05D007119 5.8e-73 279.3 463 47.7
MSTRG.10119 Avicennia marina HOM05D005806 ORTHO05D007119 1.7e-72 277.7 483 48.0
Sc13g0003160 Simmondsia chinensis HOM05D005806 ORTHO05D007119 2.2e-72 277.3 411 47.4
MBI18_g21793_MAGBIO Magnolia biondii HOM05D005806 ORTHO05D007119 3.2e-71 273.5 455 50.8
PSO832G4515 Papaver somniferum HOM05D005806 ORTHO05D007119 1.1e-68 265.0 457 48.4
PSO210G6439 Papaver somniferum HOM05D005806 ORTHO05D007119 6.3e-67 259.2 457 48.1
Lalb_Chr07g0182271 Lupinus albus HOM05D005806 ORTHO05D007119 2.4e-66 257.3 455 46.2
ECA240G3979 Erigeron canadensis HOM05D005806 ORTHO05D007119 4.5e-65 253.1 440 43.0
Migut.N00070 Erythranthe guttata HOM05D005806 ORTHO05D007119 5.0e-64 249.6 477 41.3
CsaV3_3G014910 Cucumis sativus L. HOM05D005806 ORTHO05D007119 5.5e-63 246.1 401 45.9
Psat4g025560 Pisum sativum HOM05D005806 ORTHO05D007119 2.1e-62 244.2 453 45.5
SalBow5G0238 Salvia bowleyana HOM05D005806 ORTHO05D007119 1.0e-53 215.3 527 39.5
TAR633G1904 Trochodendron aralioides HOM05D005806 ORTHO05D007119 8.8e-53 212.2 295 48.1
AUR62015254 Chenopodium quinoa HOM05D005806 ORTHO05D007119 1.1e-52 211.8 294 49.0
TAR362G1179 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.5e-52 211.5 319 54.2
HPP92_002231 Vanilla planifolia HOM05D005806 ORTHO05D007119 3.3e-52 210.3 441 39.5
Os03g0340700 Oryza sativa ssp. japonica HOM05D005806 ORTHO05D007119 2.8e-51 207.2 458 38.9
CDE12G0749 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 4.1e-50 203.4 487 37.2
Dinv29717 Davidia involucrata HOM05D005806 ORTHO05D007119 8.5e-48 195.7 290 53.1
Zm00001eb016320 Zea mays HOM05D005806 ORTHO05D007119 8.5e-48 195.7 489 43.4
arahy.Tifrunner.gnm1.ann1.T7VR84 Arachis hypogaea HOM05D005806 ORTHO05D007119 4.2e-47 193.4 296 44.3
SEGI_25850 Sequoiadendron giganteum HOM05D005806 ORTHO05D007119 1.0e-45 188.7 528 32.8
MD13G1163500 Malus domestica HOM05D005806 ORTHO05D007119 4.4e-44 183.3 295 44.7
CDE01G0725 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 4.1e-42 176.8 460 38.3
Lalb_Chr13g0298181 Lupinus albus HOM05D005806 ORTHO05D007119 3.5e-41 173.7 456 37.7
AL3G29680 Arabidopsis lyrata HOM05D005806 ORTHO05D007119 6.5e-40 169.5 249 49.8
Rhsim04G0227400 Rhododendron simsii HOM05D005806 ORTHO05D007119 2.5e-39 167.5 320 41.6
HanXRQChr13g0413981 Helianthus annuus HOM05D005806 ORTHO05D007119 2.3e-37 161.0 137 62.0
SMO334G0099 Selaginella moellendorffii HOM05D005806 ORTHO05D007119 1.4e-29 135.2 134 53.0
Dinv29718 Davidia involucrata HOM05D000037 ORTHO05D000150 5.2e-29 133.3 136 60.3
unitig_699.g19987 Utricularia gibba HOM05D005806 ORTHO05D007119 7.5e-28 129.4 457 36.5
AagrBONN_evm.TU.Sc2ySwM_228.3483 Anthoceros agrestis HOM05D005806 ORTHO05D007119 2.4e-26 124.4 134 63.4
TAR633G1627 Trochodendron aralioides HOM05D005806 ORTHO05D007119 9.1e-26 122.5 124 58.9
CSS0010946 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 1.7e-24 118.2 72 80.6
CSS0023833 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 2.1e-22 111.3 72 77.8
HPP92_002153 Vanilla planifolia HOM05D005806 ORTHO05D007119 3.6e-22 110.5 96 59.4
AUR62015253 Chenopodium quinoa HOM05D005806 ORTHO05D007119 1.2e-20 105.5 108 56.5
TAR362G0821 Trochodendron aralioides HOM05D005806 ORTHO05D007119 4.1e-18 97.1 109 55.0
Pp3c12_16600 Physcomitrium patens HOM05D005806 ORTHO05D007119 1.0e-16 92.4 421 28.0
Mapoly0005s0119 Marchantia polymorpha HOM05D005806 ORTHO05D007119 8.6e-16 89.4 460 35.7
CBR_g4056 Chara braunii HOM05D005806 ORTHO05D007119 1.2e-14 85.5 134 43.3
FvH4_5g32480 Fragaria vesca HOM05D005806 ORTHO05D007119 3.6e-14 84.0 104 52.9
SGA_v2.0_scaffold119G32699 Striga asiatica HOM05D005806 ORTHO05D007119 2.0e-12 78.2 72 58.3
Pp3c4_12130 Physcomitrium patens HOM05D005806 ORTHO05D007119 2.9e-11 74.3 449 30.7
CBR_g31779 Chara braunii HOM05D000019 ORTHO05D000002 4.9e-11 73.6 93 37.6
CBR_g39021 Chara braunii HOM05D000003 ORTHO05D000004 1.7e-08 65.1 85 35.3


User provided reference genes

Program Settings