Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0953 Punica granatum HOM05D008657 ORTHO05D010869 3.5e-196 689.1 411 100.0
Dinv02560 Davidia involucrata HOM05D008657 ORTHO05D010869 6.8e-67 259.6 424 46.2
Prupe.2G051600 Prunus persica HOM05D008657 ORTHO05D010869 2.0e-66 258.1 429 52.0
Actinidia03250 Actinidia chinensis HOM05D008657 ORTHO05D010869 4.0e-59 233.8 365 52.9
CSS0003153 Camellia sinensis var. sinensis HOM05D000399 ORTHO05D000304 8.9e-59 232.6 336 45.8
ClCG07G005030 Citrullus lanatus HOM05D008657 ORTHO05D010869 1.9e-56 224.9 415 41.0
RcHm_v2.0_Chr1g0330001 Rosa chinensis HOM05D008657 ORTHO05D010869 3.9e-54 217.2 298 56.7
TAR376G1027 Trochodendron aralioides HOM05D008657 ORTHO05D010869 6.6e-54 216.5 421 48.9
Sed0024339 Sechium edule HOM05D008657 ORTHO05D010869 3.1e-51 207.6 413 33.9
COL.COLO4_28899 Corchorus olitorius HOM05D008657 ORTHO05D010869 6.9e-51 206.5 309 57.9
CANSAT56G3352 Cannabis sativa HOM05D008657 ORTHO05D010869 9.0e-51 206.1 428 47.2
CsaV3_5G029290 Cucumis sativus L. HOM05D008657 ORTHO05D010869 2.9e-49 201.1 332 44.3
Lj3C333T3 Lonicera japonica HOM05D008657 ORTHO05D010869 3.8e-49 200.7 431 47.3
Cpa.g.sc33.145 Carica papaya HOM05D008657 ORTHO05D010869 2.4e-48 198.0 428 47.7
MELO3C011779.2 Cucumis melo HOM05D008657 ORTHO05D010869 9.3e-48 196.1 332 41.3
FAN10G0285 Fragaria x ananassa HOM05D008657 ORTHO05D010869 1.5e-45 188.7 336 54.8
Sc08g0000170 Simmondsia chinensis HOM05D008657 ORTHO05D010869 1.4e-43 182.2 426 33.8
Aa31LG8G16330 Aethionema arabicum HOM05D008657 ORTHO05D010869 1.7e-41 175.3 308 46.4
BcaB03g16718 Brassica carinata HOM05D008657 ORTHO05D010869 6.7e-38 163.3 298 32.2
A07p01450 Brassica napus HOM05D008657 ORTHO05D010869 1.6e-36 158.7 306 38.2
Thhalv10023028m.g Eutrema salsugineum HOM05D008657 ORTHO05D010869 1.6e-36 158.7 297 32.3
Hund22231 Selenicereus undatus HOM05D008657 ORTHO05D010869 2.1e-36 158.3 404 40.8
C07p02910 Brassica napus HOM05D008657 ORTHO05D010869 1.1e-35 156.0 303 37.0
BolC7t40688H Brassica oleracea HOM05D008657 ORTHO05D010869 2.4e-35 154.8 303 36.6
AT2G19280 Arabidopsis thaliana HOM05D008657 ORTHO05D010869 4.0e-35 154.1 297 45.5
Carub.0003s3351 Capsella rubella HOM05D008657 ORTHO05D010869 4.0e-35 154.1 297 43.1
Gohir.A06G171100 Gossypium hirsutum HOM05D008657 ORTHO05D010869 4.0e-35 154.1 301 52.5
CARHR109740 Cardamine hirsuta HOM05D008657 ORTHO05D010869 1.5e-34 152.1 297 45.5
Gorai.010G208900 Gossypium raimondii HOM05D008657 ORTHO05D010869 1.5e-34 152.1 300 52.0
Sp3g32660 Schrenkiella parvula HOM05D008657 ORTHO05D010869 3.4e-34 151.0 298 46.6
BcaC06g36560 Brassica carinata HOM05D008657 ORTHO05D010869 4.5e-34 150.6 298 36.9
BraA07t27942Z Brassica rapa HOM05D008657 ORTHO05D010869 4.9e-33 147.1 301 37.9
DCAR_018350 Daucus carota HOM05D008657 ORTHO05D010869 4.2e-32 144.1 443 41.5
Thecc.10G128900 Theobroma cacao HOM05D008657 ORTHO05D010869 1.6e-31 142.1 305 51.5
Oeu052822.1 Olea europaea HOM05D008657 ORTHO05D010869 2.3e-30 138.3 238 59.7
FvH4_7g04580 Fragaria vesca HOM05D008657 ORTHO05D010869 6.7e-30 136.7 336 49.7
FAN06G4111 Fragaria x ananassa HOM05D008657 ORTHO05D010869 6.7e-30 136.7 330 49.4
AL3G49010 Arabidopsis lyrata HOM05D008657 ORTHO05D010869 2.8e-28 131.3 303 41.6
FAN01G0963 Fragaria x ananassa HOM05D008657 ORTHO05D010869 5.5e-24 117.1 327 47.7
Eucgr.G03180 Eucalyptus grandis HOM05D008657 ORTHO05D010869 1.8e-22 112.1 92 59.8
FAN03G0499 Fragaria x ananassa HOM05D008657 ORTHO05D010869 1.4e-19 102.4 151 39.7
Lj3A303T33 Lonicera japonica HOM05D008657 ORTHO05D010869 8.5e-17 93.2 293 29.4
Gohir.D06G179000 Gossypium hirsutum HOM05D008657 ORTHO05D010869 4.8e-12 77.4 203 56.2
SEGI_16669 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 3.4e-10 71.2 184 27.2
Nn7g37112 Nelumbo nucifera HOM05D008657 ORTHO05D010869 1.6e-07 62.4 54 48.1
ATR0782G042 Amborella trichopoda HOM05D006287 ORTHO05D008192 6.1e-07 60.5 210 23.8
SEGI_12196 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 1.8e-06 58.9 168 25.6
Lj2g0013463 Lotus japonicus HOM05D007358 ORTHO05D009117 5.1e-06 57.4 168 24.4
SEGI_33508 Sequoiadendron giganteum HOM05D006858 ORTHO05D008767 8.8e-06 56.6 171 27.5


User provided reference genes

Program Settings