Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0462401 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 1.1e-136 490.0 246 100.0
Haze_22076 Corylus avellana HOM05D008207 ORTHO05D010373 6.0e-42 175.3 125 65.6
Potri.012G036400 Populus trichocarpa HOM05D008207 ORTHO05D010373 1.0e-41 174.5 126 64.3
PSO170G1964 Papaver somniferum HOM05D008207 ORTHO05D010373 1.7e-41 173.7 133 63.2
Hma1.2p1_0235F.1_g099000 Hydrangea macrophylla HOM05D008207 ORTHO05D010373 1.1e-40 171.0 113 69.9
VMungo1215G1326 Vigna mungo HOM05D008207 ORTHO05D010373 1.1e-40 171.0 120 62.5
CiPaw.07G200900 Carya illinoinensis HOM05D008207 ORTHO05D010373 1.9e-40 170.2 113 67.3
MELO3C017404.2 Cucumis melo HOM05D008207 ORTHO05D010373 4.3e-40 169.1 113 67.3
CsaV3_1G032120 Cucumis sativus L. HOM05D008207 ORTHO05D010373 5.6e-40 168.7 113 66.4
Aqoxy7G02948 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 9.5e-40 167.9 126 62.7
AUR62021326 Chenopodium quinoa HOM05D008207 ORTHO05D010373 9.5e-40 167.9 146 56.2
ATR0580G068 Amborella trichopoda HOM05D008207 ORTHO05D010373 1.2e-39 167.5 124 65.3
Dinv41210 Davidia involucrata HOM05D008207 ORTHO05D010373 1.2e-39 167.5 133 59.4
GSVIVG01029258001 Vitis vinifera HOM05D008207 ORTHO05D010373 1.6e-39 167.2 113 67.3
FAN07G0484 Fragaria x ananassa HOM05D008207 ORTHO05D010373 2.1e-39 166.8 116 62.9
MBI14_g19451_MAGBIO Magnolia biondii HOM05D008207 ORTHO05D010373 2.1e-39 166.8 109 69.7
CSS0025795 Camellia sinensis var. sinensis HOM05D008207 ORTHO05D010373 2.8e-39 166.4 113 68.1
Medtr4g126910 Medicago truncatula HOM05D008207 ORTHO05D010373 2.8e-39 166.4 120 64.2
RcHm_v2.0_Chr4g0398551 Rosa chinensis HOM05D008207 ORTHO05D010373 3.6e-39 166.0 113 63.7
FvH4_4g06651 Fragaria vesca HOM05D008207 ORTHO05D010373 6.2e-39 165.2 116 62.1
FAN12G1624 Fragaria x ananassa HOM05D008207 ORTHO05D000286 6.2e-39 165.2 116 62.1
FAN22G1797 Fragaria x ananassa HOM05D008207 ORTHO05D010373 6.2e-39 165.2 116 61.2
Lalb_Chr12g0199751 Lupinus albus HOM05D008207 ORTHO05D010373 1.1e-38 164.5 113 65.5
Phvul.003G137466 Phaseolus vulgaris HOM05D008207 ORTHO05D010373 1.1e-38 164.5 232 44.0
TAR625G1057 Trochodendron aralioides HOM05D008207 ORTHO05D010373 1.1e-38 164.5 119 62.2
FAN17G2040 Fragaria x ananassa HOM05D008207 ORTHO05D010373 1.4e-38 164.1 116 61.2
AUR62033242 Chenopodium quinoa HOM05D008207 ORTHO05D010373 2.3e-38 163.3 143 55.9
Glyma.13G103300 Glycine max HOM05D008207 ORTHO05D010373 4.0e-38 162.5 208 47.6
Sed0019966 Sechium edule HOM05D008207 ORTHO05D010373 5.2e-38 162.2 113 62.8
vmacro13136 Vaccinium macrocarpon HOM05D008207 ORTHO05D010373 8.9e-38 161.4 146 54.8
TPR.G5411 Trifolium pratense HOM05D008207 ORTHO05D010373 1.5e-37 160.6 120 62.5
Prupe.1G068900 Prunus persica HOM05D008207 ORTHO05D010373 9.9e-37 157.9 127 59.1
Hund26321 Selenicereus undatus HOM05D008207 ORTHO05D010373 9.9e-37 157.9 128 60.2
Aqoxy5G03535 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 1.7e-36 157.1 126 61.9
arahy.Tifrunner.gnm1.ann1.PC6R8Z Arachis hypogaea HOM05D008207 ORTHO05D010373 3.8e-36 156.0 140 55.0
ClCG06G013910 Citrullus lanatus HOM05D008207 ORTHO05D010373 3.8e-36 156.0 125 59.2
Sabra12G0024900 Salix brachista HOM05D008207 ORTHO05D010373 8.4e-36 154.8 134 56.7
Ca_21275_v3 Cicer arietinum L. HOM05D008207 ORTHO05D010373 1.9e-35 153.7 120 59.2
Eucgr.C00072 Eucalyptus grandis HOM05D008207 ORTHO05D010373 1.9e-35 153.7 130 56.9
Psat4g014640 Pisum sativum HOM05D008207 ORTHO05D010373 4.1e-35 152.5 203 44.3
MD16G1242100 Malus domestica HOM05D008207 ORTHO05D010373 5.1e-33 145.6 144 50.0
arahy.Tifrunner.gnm1.ann1.7T8Q8E Arachis hypogaea HOM05D008207 ORTHO05D010373 1.5e-32 144.1 224 41.5
Eucgr.L03679 Eucalyptus grandis HOM05D008207 ORTHO05D010373 1.5e-32 144.1 132 55.3
Lj4g0004064 Lotus japonicus HOM05D008207 ORTHO05D010373 1.5e-32 144.1 209 44.5
Pp3c22_15400 Physcomitrium patens HOM05D008207 ORTHO05D010373 3.3e-32 142.9 205 42.4
EL10Ac8g18310 Beta vulgaris HOM05D008207 ORTHO05D010373 2.0e-29 133.7 113 58.4
Rhsim01G0002700 Rhododendron simsii HOM05D008207 ORTHO05D010373 5.8e-29 132.1 93 69.9
Actinidia01310 Actinidia chinensis HOM05D008207 ORTHO05D010373 4.9e-28 129.0 92 65.2
DCAR_009922 Daucus carota HOM05D008207 ORTHO05D010373 6.6e-25 118.6 76 71.1
Mapoly0010s0073 Marchantia polymorpha HOM05D008207 ORTHO05D010373 9.0e-22 108.2 113 50.4
SEGI_33506 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 1.2e-21 107.8 94 52.1
CDE05G0633 Ceratophyllum demersum HOM05D008207 ORTHO05D010373 1.5e-21 107.5 83 61.4
Psat0s6286g0080 Pisum sativum HOM05D008207 ORTHO05D010373 2.1e-18 97.1 83 51.8
Psat0s6286g0040 Pisum sativum HOM05D003133 ORTHO05D010373 1.5e-08 64.3 60 48.3
SEGI_04181 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 6.2e-07 58.9 30 80.0


User provided reference genes

Program Settings