Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu064602.3 Olea europaea HOM05D007027 ORTHO05D008765 1.5e-242 842.4 424 100.0
Nitab4.5_0000787g0210 Nicotiana tabacum HOM05D007027 ORTHO05D008765 1.4e-147 526.9 426 65.7
Migut.B00775 Erythranthe guttata HOM05D007027 ORTHO05D008765 1.8e-147 526.6 411 68.9
CAN.G855.3 Capsicum annuum HOM05D007027 ORTHO05D008765 5.3e-147 525.0 422 64.2
Solyc01g103560.3 Solanum lycopersicum HOM05D007027 ORTHO05D008765 1.5e-146 523.5 429 64.3
PGSC0003DMG400024892 Solanum tuberosum HOM05D007027 ORTHO05D008765 2.6e-146 522.7 424 64.6
CSS0028981 Camellia sinensis var. sinensis HOM05D007027 ORTHO05D008765 5.9e-146 521.5 426 64.8
Nitab4.5_0004106g0030 Nicotiana tabacum HOM05D007027 ORTHO05D008765 1.3e-145 520.4 424 65.3
Sopen01g045910 Solanum pennellii HOM05D007027 ORTHO05D008765 6.5e-145 518.1 429 63.6
SGA_v2.0_scaffold304G47919 Striga asiatica HOM05D007027 ORTHO05D008765 8.5e-145 517.7 423 65.5
SalBow7G1849 Salvia bowleyana HOM05D007027 ORTHO05D008765 6.1e-143 511.5 412 65.3
Cc02_g23170 Coffea canephora HOM05D007027 ORTHO05D008765 7.9e-143 511.1 429 65.0
CiPaw.05G004800 Carya illinoinensis HOM05D007027 ORTHO05D008765 2.3e-142 509.6 409 66.5
GSVIVG01023249001 Vitis vinifera HOM05D007027 ORTHO05D008765 6.7e-142 508.1 423 63.4
Manes.07G024000 Manihot esculenta HOM05D007027 ORTHO05D008765 4.3e-141 505.4 418 65.8
Dinv07482 Davidia involucrata HOM05D007027 ORTHO05D008765 1.7e-140 503.4 370 69.7
Cfa004487 Carpinus fangiana HOM05D007027 ORTHO05D008765 4.8e-140 501.9 416 64.7
Duzib132G0056 Durio zibethinus HOM05D007027 ORTHO05D008765 9.1e-139 497.7 416 65.1
THA.LOC104816809 Tarenaya hassleriana HOM05D007027 ORTHO05D008765 2.0e-138 496.5 420 62.6
Gohir.D01G174800 Gossypium hirsutum HOM05D007027 ORTHO05D008765 3.4e-138 495.7 410 64.4
MD15G1435400 Malus domestica HOM05D007027 ORTHO05D008765 7.7e-138 494.6 408 64.7
Gorai.002G216900 Gossypium raimondii HOM05D007027 ORTHO05D008765 1.7e-137 493.4 410 64.4
MD08G1241400 Malus domestica HOM05D007027 ORTHO05D008765 2.2e-137 493.0 408 65.2
Cpa.g.sc113.45 Carica papaya HOM05D007027 ORTHO05D008765 3.2e-136 489.2 414 62.8
HanXRQChr09g0249131 Helianthus annuus HOM05D007027 ORTHO05D008765 3.2e-136 489.2 419 65.4
QL02p100436 Quercus lobata HOM05D007027 ORTHO05D008765 3.2e-136 489.2 417 66.2
Gohir.A01G183800 Gossypium hirsutum HOM05D007027 ORTHO05D008765 3.0e-134 482.6 406 63.1
Actinidia00176 Actinidia chinensis HOM05D007027 ORTHO05D008765 5.1e-134 481.9 391 65.2
FvH4_3g33250 Fragaria vesca HOM05D007027 ORTHO05D008765 6.7e-134 481.5 420 63.3
RcHm_v2.0_Chr5g0060601 Rosa chinensis HOM05D007027 ORTHO05D008765 8.8e-134 481.1 413 63.4
CiPaw.06G173600 Carya illinoinensis HOM05D007027 ORTHO05D008765 3.3e-133 479.2 419 61.1
FAN25G1584 Fragaria x ananassa HOM05D007027 ORTHO05D008765 1.7e-132 476.9 413 63.2
FAN16G3401 Fragaria x ananassa HOM05D007027 ORTHO05D008765 2.8e-132 476.1 420 62.4
PGR142G1179 Punica granatum HOM05D007027 ORTHO05D008765 6.3e-132 474.9 412 63.3
TAR381G1092 Trochodendron aralioides HOM05D007027 ORTHO05D008765 2.4e-131 473.0 413 61.3
Nn5g27423 Nelumbo nucifera HOM05D007027 ORTHO05D008765 5.3e-131 471.9 412 62.1
CsaV3_5G029790 Cucumis sativus L. HOM05D007027 ORTHO05D008765 9.1e-131 471.1 417 61.2
Glyma.12G167000 Glycine max HOM05D007027 ORTHO05D008765 1.2e-130 470.7 408 62.0
Lj5C266T4 Lonicera japonica HOM05D007027 ORTHO05D008765 2.6e-130 469.5 425 61.2
Ca_00043_v3 Cicer arietinum L. HOM05D007027 ORTHO05D008765 3.4e-130 469.2 418 61.2
Thhalv10007981m.g Eutrema salsugineum HOM05D007027 ORTHO05D008765 5.9e-130 468.4 420 60.2
DCAR_006671 Daucus carota HOM05D007027 ORTHO05D008765 2.2e-129 466.5 415 60.2
FAN11G0675 Fragaria x ananassa HOM05D007027 ORTHO05D008765 3.8e-129 465.7 456 58.6
Rhsim11G0122600 Rhododendron simsii HOM05D007027 ORTHO05D008765 6.5e-129 464.9 446 58.5
MBI03_g18680_MAGBIO Magnolia biondii HOM05D007027 ORTHO05D008765 2.5e-128 463.0 391 62.7
Atru.chr6.497 Acer truncatum HOM05D007027 ORTHO05D008765 3.2e-128 462.6 416 61.5
Carub.0001s0916 Capsella rubella HOM05D007027 ORTHO05D008765 4.2e-128 462.2 422 60.2
Haze_10044 Corylus avellana HOM05D007027 ORTHO05D008765 5.5e-128 461.8 521 53.4
CANSAT54G3047 Cannabis sativa HOM05D007027 ORTHO05D008765 9.4e-128 461.1 418 58.1
MELO3C011820.2 Cucumis melo HOM05D007027 ORTHO05D008765 9.4e-128 461.1 434 58.8
CARHR009790 Cardamine hirsuta HOM05D007027 ORTHO05D008765 1.2e-127 460.7 422 60.2
Glyma.16G003100 Glycine max HOM05D007027 ORTHO05D008765 2.1e-127 459.9 423 59.6
AT1G09800 Arabidopsis thaliana HOM05D007027 ORTHO05D008765 2.7e-127 459.5 421 59.6
VMungo0540G1081 Vigna mungo HOM05D007027 ORTHO05D008765 4.7e-127 458.8 416 59.9
Psat1g222360 Pisum sativum HOM05D007027 ORTHO05D008765 6.1e-127 458.4 402 61.4
Potri.003G008500 Populus trichocarpa HOM05D007027 ORTHO05D008765 1.8e-126 456.8 399 61.2
BcaC05g24848 Brassica carinata HOM05D007027 ORTHO05D008765 2.3e-126 456.4 404 59.7
Sp1g08410 Schrenkiella parvula HOM05D007027 ORTHO05D008765 6.7e-126 454.9 424 59.4
Aqoxy3G00475 Aquilegia oxysepala HOM05D007027 ORTHO05D008765 2.6e-125 453.0 375 64.0
Medtr2g005830 Medicago truncatula HOM05D007027 ORTHO05D008765 1.7e-124 450.3 375 63.2
Thecc.02G018500 Theobroma cacao HOM05D007027 ORTHO05D008765 1.8e-123 446.8 421 60.6
ECA233G3768 Erigeron canadensis HOM05D007027 ORTHO05D008765 2.4e-123 446.4 362 65.5
TPR.G2122 Trifolium pratense HOM05D007027 ORTHO05D008765 2.4e-123 446.4 418 59.1
Prupe.1G579000 Prunus persica HOM05D007027 ORTHO05D008765 4.1e-123 445.7 420 61.9
TWI23G0132 Tripterygium wilfordii HOM05D007027 ORTHO05D008765 4.1e-123 445.7 417 58.3
arahy.Tifrunner.gnm1.ann1.BAUB6M Arachis hypogaea HOM05D007027 ORTHO05D008765 5.3e-123 445.3 362 63.8
C08p49260 Brassica napus HOM05D007027 ORTHO05D008765 5.3e-123 445.3 364 62.4
BolC8t52461H Brassica oleracea HOM05D007027 ORTHO05D008765 1.2e-122 444.1 364 62.1
A09p65310 Brassica napus HOM05D007027 ORTHO05D008765 2.0e-122 443.4 364 62.6
COL.COLO4_17723 Corchorus olitorius HOM05D007027 ORTHO05D008765 2.6e-122 443.0 371 62.8
arahy.Tifrunner.gnm1.ann1.3G44QY Arachis hypogaea HOM05D007027 ORTHO05D008765 3.5e-122 442.6 362 63.5
Sabra03G0004200 Salix brachista HOM05D007027 ORTHO05D008765 3.5e-122 442.6 428 57.0
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 1.3e-121 440.7 411 57.2
unitig_699.g19848 Utricularia gibba HOM05D007027 ORTHO05D008765 1.3e-121 440.7 404 59.7
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 1.7e-121 440.3 411 57.2
AL1G20380 Arabidopsis lyrata HOM05D007027 ORTHO05D008765 3.8e-121 439.1 451 55.0
Lalb_Chr20g0123691 Lupinus albus HOM05D007027 ORTHO05D008765 3.8e-121 439.1 372 62.9
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 6.5e-121 438.3 397 59.2
Hund15459 Selenicereus undatus HOM05D007027 ORTHO05D008765 2.5e-120 436.4 413 58.6
EL10Ac6g14111 Beta vulgaris HOM05D007027 ORTHO05D008765 4.2e-120 435.6 373 63.5
Os12g0194800 Oryza sativa ssp. japonica HOM05D007027 ORTHO05D008765 9.4e-120 434.5 364 63.2
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 1.2e-119 434.1 395 59.0
FAN21G1550 Fragaria x ananassa HOM05D007027 ORTHO05D008765 6.1e-119 431.8 420 58.6
vmacro01711 Vaccinium macrocarpon HOM05D007027 ORTHO05D008765 6.1e-119 431.8 455 54.5
Ciclev10001491m.g Citrus clementina HOM05D007027 ORTHO05D008765 1.4e-118 430.6 375 61.9
ATR1136G089 Amborella trichopoda HOM05D007027 ORTHO05D008765 3.3e-117 426.0 408 58.1
Lj6g0019688 Lotus japonicus HOM05D007027 ORTHO05D008765 7.7e-114 414.8 405 56.8
Lj6g0023928 Lotus japonicus HOM05D007027 ORTHO05D008765 7.7e-114 414.8 405 56.8
PSO170G1275 Papaver somniferum HOM05D007027 ORTHO05D008765 1.0e-113 414.5 368 58.2
PSO017G0894 Papaver somniferum HOM05D007027 ORTHO05D008765 2.9e-113 412.9 368 58.2
Zm00001eb138750 Zea mays HOM05D007027 ORTHO05D008765 6.1e-111 405.2 414 55.6
BcaC07g41859 Brassica carinata HOM05D007027 ORTHO05D008765 1.4e-110 404.1 411 56.0
Eucgr.I02764 Eucalyptus grandis HOM05D007027 ORTHO05D008765 3.7e-108 396.0 320 63.8
AUR62043952 Chenopodium quinoa HOM05D007027 ORTHO05D008765 1.9e-104 383.6 363 58.7
Sed0027668 Sechium edule HOM05D007027 ORTHO05D008765 2.6e-101 373.2 277 67.1
Pp3c1_13020 Physcomitrium patens HOM05D007027 ORTHO05D008765 6.3e-100 368.6 365 53.7
Phvul.006G218900 Phaseolus vulgaris HOM05D007027 ORTHO05D008765 1.7e-92 344.0 260 69.6
Sc07g0005100 Simmondsia chinensis HOM05D007027 ORTHO05D008765 5.4e-91 339.0 276 65.6
ClCG11G013270 Citrullus lanatus HOM05D007027 ORTHO05D008765 3.5e-90 336.3 417 49.4
Mapoly0016s0042 Marchantia polymorpha HOM05D007027 ORTHO05D008765 7.8e-90 335.1 373 49.9
HPP92_013442 Vanilla planifolia HOM05D007027 ORTHO05D008765 1.2e-85 321.2 345 52.5
SMO118G0354 Selaginella moellendorffii HOM05D007027 ORTHO05D008765 1.2e-82 311.2 362 47.5
Aa31LG1G5150 Aethionema arabicum HOM05D007027 ORTHO05D008765 4.7e-79 299.3 225 66.7
HPP92_013441 Vanilla planifolia HOM05D007027 ORTHO05D008765 8.3e-76 288.5 185 73.5
CBR_g30061 Chara braunii HOM05D007027 ORTHO05D008765 2.5e-72 276.9 458 40.6
CDE05G2927 Ceratophyllum demersum HOM05D007027 ORTHO05D008765 2.1e-66 257.3 148 81.8
Lsat_1_v5_gn_9_120240 Lactuca sativa HOM05D007027 ORTHO05D008765 2.9e-60 236.9 183 69.4
AUR62028254 Chenopodium quinoa HOM05D007027 ORTHO05D008765 2.1e-58 230.7 236 54.7
Migut.B00774 Erythranthe guttata HOM05D007027 ORTHO05D008765 3.1e-54 216.9 141 81.6
Peaxi162Scf00011g01224 Petunia axillaris HOM05D007027 ORTHO05D008765 4.9e-52 209.5 242 52.1
MCO02G420 Micromonas commoda HOM05D007027 ORTHO05D008765 1.5e-48 198.0 414 34.3
RcHm_v2.0_Chr3g0481081 Rosa chinensis HOM05D007027 ORTHO05D008765 8.7e-33 145.6 79 84.8
CDE05G0566 Ceratophyllum demersum HOM05D007027 ORTHO05D008765 6.7e-25 119.4 179 45.8
SMO361G0559 Selaginella moellendorffii HOM05D006708 ORTHO05D008321 3.6e-18 97.1 209 32.1
Pp3c21_5420 Physcomitrium patens HOM05D006708 ORTHO05D008321 6.7e-17 92.8 209 29.7
Mapoly0209s0002 Marchantia polymorpha HOM05D006708 ORTHO05D008321 2.6e-16 90.9 213 30.0
SalBow2G2621 Salvia bowleyana HOM05D006708 ORTHO05D008321 2.6e-16 90.9 197 31.0
Lj4g0015836 Lotus japonicus HOM05D006708 ORTHO05D008321 4.4e-16 90.1 244 27.0
Rhsim12G0000100 Rhododendron simsii HOM05D006708 ORTHO05D007921 5.7e-16 89.7 206 29.1
HanXRQChr10g0293331 Helianthus annuus HOM05D006708 ORTHO05D008321 7.4e-16 89.4 201 30.8
Dinv29501 Davidia involucrata HOM05D006708 ORTHO05D008321 2.4e-14 84.3 199 28.6
RcHm_v2.0_Chr4g0427681 Rosa chinensis HOM05D006708 ORTHO05D008321 4.1e-14 83.6 202 27.2
PGSC0003DMG400027203 Solanum tuberosum HOM05D006708 ORTHO05D008321 4.1e-14 83.6 199 31.7
MSTRG.24854 Avicennia marina HOM05D006708 ORTHO05D008321 5.3e-14 83.2 199 28.6
Lj6A702T41 Lonicera japonica HOM05D006708 ORTHO05D008321 7.0e-14 82.8 199 29.6
CAN.G305.34 Capsicum annuum HOM05D006708 ORTHO05D008321 1.2e-13 82.0 199 31.2
Solyc05g053190.3 Solanum lycopersicum HOM05D006708 ORTHO05D008321 2.0e-13 81.3 197 31.0
CsaV3_6G000260 Cucumis sativus L. HOM05D006708 ORTHO05D008321 2.6e-13 80.9 200 29.5
arahy.Tifrunner.gnm1.ann1.H7T0W5 Arachis hypogaea HOM05D006708 ORTHO05D008321 3.5e-13 80.5 210 26.7
FAN12G1816 Fragaria x ananassa HOM05D006708 ORTHO05D008321 3.5e-13 80.5 202 26.2
FAN17G2628 Fragaria x ananassa HOM05D006708 ORTHO05D008321 4.5e-13 80.1 202 26.2
Sopen05g031700 Solanum pennellii HOM05D006708 ORTHO05D008321 4.5e-13 80.1 197 31.0
AagrBONN_evm.TU.Sc2ySwM_228.1603 Anthoceros agrestis HOM05D006708 ORTHO05D008321 5.9e-13 79.7 202 28.7
GSVIVG01017693001 Vitis vinifera HOM05D006708 ORTHO05D008321 5.9e-13 79.7 205 28.3
arahy.Tifrunner.gnm1.ann1.YU479Z Arachis hypogaea HOM05D006708 ORTHO05D008321 7.7e-13 79.3 210 26.7
Nitab4.5_0000745g0080 Nicotiana tabacum HOM05D006708 ORTHO05D008321 7.7e-13 79.3 197 29.9
FvH4_4g21570 Fragaria vesca HOM05D006708 ORTHO05D008321 1.0e-12 79.0 202 26.2
FAN07G1828 Fragaria x ananassa HOM05D006708 ORTHO05D008321 1.0e-12 79.0 202 25.7
Peaxi162Scf00164g00315 Petunia axillaris HOM05D006708 ORTHO05D008321 3.8e-12 77.0 200 28.0
Potri.008G206200 Populus trichocarpa HOM05D006708 ORTHO05D008321 2.5e-11 74.3 200 26.5
Cre13.g591501 Chlamydomonas reinhardtii HOM05D006708 ORTHO05D008321 1.2e-10 72.0 219 26.9
SEGI_30443 Sequoiadendron giganteum HOM05D007027 ORTHO05D008765 1.2e-10 72.0 54 64.8
CBR_g55386 Chara braunii HOM05D006708 ORTHO05D008321 2.1e-10 71.2 179 32.4
ClCG06G004170 Citrullus lanatus HOM05D006708 ORTHO05D008321 3.9e-09 67.0 178 28.7
Cre09.g405150 Chlamydomonas reinhardtii HOM05D006708 ORTHO05D008321 2.0e-08 64.7 190 28.9
Zm00001eb018490 Zea mays HOM05D005655 ORTHO05D007386 9.7e-08 62.4 196 28.1
Nitab4.5_0001769g0170 Nicotiana tabacum HOM05D006708 ORTHO05D008321 1.7e-07 61.6 179 27.4
Sed0006346 Sechium edule HOM05D006708 ORTHO05D008321 2.4e-06 57.8 151 29.1
SEGI_32206 Sequoiadendron giganteum HOM05D006708 ORTHO05D008321 2.4e-06 57.8 74 39.2
Carub.0007s3123 Capsella rubella HOM05D006401 ORTHO05D007864 3.1e-06 57.4 160 26.2


User provided reference genes

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