Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063151.1 Olea europaea HOM05D005423 ORTHO05D006223 8.4e-71 270.4 152 100.0
Oeu000496.1 Olea europaea HOM05D005423 ORTHO05D006223 2.0e-40 169.5 92 89.1
Nitab4.5_0004015g0040 Nicotiana tabacum HOM05D005423 ORTHO05D006223 3.0e-28 129.0 93 65.6
Nitab4.5_0006659g0010 Nicotiana tabacum HOM05D005423 ORTHO05D006223 5.2e-28 128.3 93 65.6
SGA_v2.0_scaffold1G00298 Striga asiatica HOM05D005423 ORTHO05D006223 8.3e-26 120.9 120 50.8
Migut.M01932 Erythranthe guttata HOM05D005423 ORTHO05D006223 5.9e-24 114.8 109 54.1
HanXRQChr01g0020631 Helianthus annuus HOM05D005423 ORTHO05D006223 1.0e-23 114.0 98 57.1
Lsat_1_v5_gn_1_91741 Lactuca sativa HOM05D005423 ORTHO05D006223 2.2e-23 112.8 95 58.9
Solyc11g072680.1 Solanum lycopersicum HOM05D005423 ORTHO05D006223 5.0e-23 111.7 116 52.6
Sopen11g030350 Solanum pennellii HOM05D005423 ORTHO05D006223 5.0e-23 111.7 116 52.6
Atru.chr10.659 Acer truncatum HOM05D005423 ORTHO05D006223 6.5e-23 111.3 91 61.5
CAN.G84.20 Capsicum annuum HOM05D005423 ORTHO05D006223 8.5e-23 110.9 120 46.7
Hma1.2p1_0410F.1_g147050 Hydrangea macrophylla HOM05D005423 ORTHO05D006223 8.5e-23 110.9 94 58.5
Rhsim13G0126500 Rhododendron simsii HOM05D005423 ORTHO05D006223 8.5e-23 110.9 108 51.9
Cfa000754 Carpinus fangiana HOM05D005423 ORTHO05D006223 2.5e-22 109.4 119 50.4
QL05p063092 Quercus lobata HOM05D005423 ORTHO05D006223 2.5e-22 109.4 98 57.1
PGSC0003DMG400025363 Solanum tuberosum HOM05D005423 ORTHO05D006223 2.5e-22 109.4 112 50.0
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 4.2e-22 108.6 83 59.0
Potri.001G440800 Populus trichocarpa HOM05D005423 ORTHO05D006223 9.5e-22 107.5 118 54.2
Haze_05969 Corylus avellana HOM05D005423 ORTHO05D006223 1.2e-21 107.1 101 56.4
Lj1P1155T48 Lonicera japonica HOM05D005423 ORTHO05D006223 1.2e-21 107.1 99 49.5
MD00G1097400 Malus domestica HOM05D005423 ORTHO05D006223 1.6e-21 106.7 105 52.4
Manes.03G066900 Manihot esculenta HOM05D005423 ORTHO05D006223 1.4e-20 103.6 123 46.3
Sabra16G0300100 Salix brachista HOM05D005423 ORTHO05D006223 1.4e-20 103.6 114 50.0
CiPaw.09G149100 Carya illinoinensis HOM05D005423 ORTHO05D006223 1.8e-20 103.2 112 53.6
Gohir.D02G104700 Gossypium hirsutum HOM05D005423 ORTHO05D006223 3.0e-20 102.4 87 57.5
Gorai.005G118900 Gossypium raimondii HOM05D005423 ORTHO05D006223 3.0e-20 102.4 87 57.5
Sabra16G0298100 Salix brachista HOM05D005423 ORTHO05D006223 3.0e-20 102.4 114 49.1
Thecc.06G005400 Theobroma cacao HOM05D005423 ORTHO05D006223 3.0e-20 102.4 92 56.5
Duzib160G0446 Durio zibethinus HOM05D005423 ORTHO05D006223 5.2e-20 101.7 88 58.0
Ciclev10017493m.g Citrus clementina HOM05D005423 ORTHO05D006223 1.2e-19 100.5 93 57.0
FAN21G0600 Fragaria x ananassa HOM05D005423 ORTHO05D006223 1.2e-19 100.5 80 55.0
TWI38G0231 Tripterygium wilfordii HOM05D005423 ORTHO05D006223 1.2e-19 100.5 96 51.0
FvH4_3g11440 Fragaria vesca HOM05D005423 ORTHO05D006223 3.4e-19 99.0 111 45.0
AUR62028667 Chenopodium quinoa HOM05D005423 ORTHO05D006223 4.4e-19 98.6 92 50.0
FAN16G1003 Fragaria x ananassa HOM05D005423 ORTHO05D006223 5.7e-19 98.2 80 53.8
Gohir.A02G088801 Gossypium hirsutum HOM05D005423 ORTHO05D006223 5.7e-19 98.2 97 52.6
Prupe.4G102300 Prunus persica HOM05D005423 ORTHO05D006223 5.7e-19 98.2 95 50.5
Sc04g0008360 Simmondsia chinensis HOM05D005423 ORTHO05D006223 5.7e-19 98.2 93 51.6
CANSAT35G1706 Cannabis sativa HOM05D005423 ORTHO05D006223 7.5e-19 97.8 80 56.2
Aqoxy2G01436 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 9.8e-19 97.4 122 41.8
FAN25G0767 Fragaria x ananassa HOM05D005423 ORTHO05D006223 9.8e-19 97.4 114 43.9
Psat1g018720 Pisum sativum HOM05D005423 ORTHO05D006223 3.7e-18 95.5 80 55.0
EL10Ac5g10610 Beta vulgaris HOM05D005423 ORTHO05D006223 6.3e-18 94.7 97 48.5
AUR62028668 Chenopodium quinoa HOM05D005423 ORTHO05D006223 6.3e-18 94.7 92 48.9
Aa31LG6G12020 Aethionema arabicum HOM05D005423 ORTHO05D006223 1.1e-17 94.0 79 55.7
AUR62008089 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.1e-17 94.0 115 43.5
Ca_02385_v3 Cicer arietinum L. HOM05D005423 ORTHO05D006223 1.4e-17 93.6 93 49.5
MBI19_g30013_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 1.8e-17 93.2 81 53.1
TPR.G22906 Trifolium pratense HOM05D005423 ORTHO05D006223 5.4e-17 91.7 105 44.8
AUR62008091 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.2e-16 90.5 92 48.9
Lalb_Chr11g0073251 Lupinus albus HOM05D005423 ORTHO05D006223 1.2e-16 90.5 92 46.7
Lj6g0018842 Lotus japonicus HOM05D005423 ORTHO05D006223 2.7e-16 89.4 93 46.2
AUR62008092 Chenopodium quinoa HOM05D005423 ORTHO05D006223 4.5e-16 88.6 92 46.7
COL.COLO4_26869 Corchorus olitorius HOM05D005423 ORTHO05D006223 4.5e-16 88.6 74 56.8
A08p11040 Brassica napus HOM05D005423 ORTHO05D006223 1.7e-15 86.7 81 50.6
BraA08t33095Z Brassica rapa HOM05D005423 ORTHO05D006223 1.7e-15 86.7 81 50.6
CARHR030270 Cardamine hirsuta HOM05D005423 ORTHO05D006223 1.7e-15 86.7 81 49.4
Glyma.15G191500 Glycine max HOM05D005423 ORTHO05D006223 1.7e-15 86.7 93 46.2
Ah.02g124440 Amaranthus hybridus HOM05D005423 ORTHO05D006223 2.3e-15 86.3 84 47.6
BcaB04g18206 Brassica carinata HOM05D005423 ORTHO05D006223 2.3e-15 86.3 81 49.4
BcaC07g37806 Brassica carinata HOM05D005423 ORTHO05D006223 2.3e-15 86.3 81 49.4
BolC8t48195H Brassica oleracea HOM05D005423 ORTHO05D006223 2.3e-15 86.3 81 49.4
Carub.0001s2910 Capsella rubella HOM05D005423 ORTHO05D006223 2.9e-15 85.9 81 49.4
Thhalv10009325m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 2.9e-15 85.9 81 49.4
Medtr2g047120 Medicago truncatula HOM05D005423 ORTHO05D006223 3.8e-15 85.5 95 45.3
EL10Ac5g10674 Beta vulgaris HOM05D005423 ORTHO05D006223 8.6e-15 84.3 111 39.6
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 8.6e-15 84.3 77 48.1
Carub.0006s3088 Capsella rubella HOM05D005423 ORTHO05D006223 1.1e-14 84.0 79 48.1
AL1G44970 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 2.5e-14 82.8 81 48.1
Sp1g26680 Schrenkiella parvula HOM05D005423 ORTHO05D006223 2.5e-14 82.8 81 48.1
AT1G30800 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 3.3e-14 82.4 81 48.1
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 5.6e-14 81.6 111 39.6
CDE04G0856 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 5.6e-14 81.6 93 45.2
A06p18470 Brassica napus HOM05D005423 ORTHO05D006223 2.1e-13 79.7 77 49.4
BcaC07g39399 Brassica carinata HOM05D005423 ORTHO05D006223 2.8e-13 79.3 77 49.4
C08p24310 Brassica napus HOM05D005423 ORTHO05D006223 2.8e-13 79.3 77 49.4
BolC8t50049H Brassica oleracea HOM05D005423 ORTHO05D006223 2.8e-13 79.3 77 49.4
CDE04G2898 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 2.8e-13 79.3 119 36.1
BcaB01g00727 Brassica carinata HOM05D005423 ORTHO05D006223 6.1e-13 78.2 76 48.7
Sc21g0002200 Simmondsia chinensis HOM05D005423 ORTHO05D006223 1.0e-12 77.4 83 43.4
THA.LOC104814335 Tarenaya hassleriana HOM05D005423 ORTHO05D006223 1.5e-11 73.6 81 42.0
PSO210G3101 Papaver somniferum HOM05D005423 ORTHO05D006223 2.6e-11 72.8 79 38.0
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 4.4e-11 72.0 116 33.6
Sc21g0002210 Simmondsia chinensis HOM05D005423 ORTHO05D006223 5.7e-11 71.6 83 42.2
AT4G12950 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 6.4e-10 68.2 77 44.2
CARHR237890 Cardamine hirsuta HOM05D005423 ORTHO05D006223 6.4e-10 68.2 77 40.3
Mapoly0033s0033 Marchantia polymorpha HOM05D005423 ORTHO05D006223 6.4e-10 68.2 118 33.1
Thhalv10026388m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 1.4e-09 67.0 80 38.8
Thhalv10027436m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 1.4e-09 67.0 85 38.8
BcaNung00507 Brassica carinata HOM05D005423 ORTHO05D006223 1.8e-09 66.6 80 40.0
Nn8g39654 Nelumbo nucifera HOM05D005423 ORTHO05D006223 1.8e-09 66.6 77 40.3
Sp7g27780 Schrenkiella parvula HOM05D005423 ORTHO05D006223 1.8e-09 66.6 80 38.8
MBI19_g33491_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 3.2e-09 65.9 112 37.5
A03p59360 Brassica napus HOM05D005423 ORTHO05D006223 5.4e-09 65.1 80 38.8
BraA03t14993Z Brassica rapa HOM05D005423 ORTHO05D006223 5.4e-09 65.1 80 38.8
Sp7g28070 Schrenkiella parvula HOM05D005423 ORTHO05D006223 5.4e-09 65.1 81 42.0
A03p59580 Brassica napus HOM05D005423 ORTHO05D006223 7.0e-09 64.7 81 39.5
DCAR_002955 Daucus carota HOM05D005423 ORTHO05D006223 7.0e-09 64.7 76 42.1
C07p57390 Brassica napus HOM05D005423 ORTHO05D006223 9.2e-09 64.3 80 37.5
BolC7t46208H Brassica oleracea HOM05D005423 ORTHO05D006223 9.2e-09 64.3 80 37.5
BraA03t15014Z Brassica rapa HOM05D005423 ORTHO05D006223 2.7e-08 62.8 81 37.0
DCAR_001448 Daucus carota HOM05D005423 ORTHO05D006223 4.6e-08 62.0 73 41.1
AT4G29980 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 5.9e-08 61.6 80 37.5
BcaC07g40588 Brassica carinata HOM05D005423 ORTHO05D006223 5.9e-08 61.6 63 49.2
AL7G22260 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 2.3e-07 59.7 77 37.7
CAN.G65.131 Capsicum annuum HOM05D003663 ORTHO05D005327 6.6e-07 58.2 117 29.9
CARHR238100 Cardamine hirsuta HOM05D005423 ORTHO05D006223 8.6e-07 57.8 78 37.2
BcaC09g50401 Brassica carinata HOM05D005423 ORTHO05D006223 1.1e-06 57.4 59 50.8
Carub.0007s1066 Capsella rubella HOM05D005423 ORTHO05D006223 1.9e-06 56.6 76 36.8
FvH4_1g24910 Fragaria vesca HOM05D005423 ORTHO05D006223 2.5e-06 56.2 42 59.5
FvH4_6g29350 Fragaria vesca HOM05D005423 ORTHO05D006223 3.3e-06 55.8 42 59.5
SMO220G0003 Selaginella moellendorffii HOM05D002232 ORTHO05D002323 5.6e-06 55.1 110 32.7


User provided reference genes

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