Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061378.1 Olea europaea HOM05D004480 ORTHO05D005546 2.3e-100 369.0 199 100.0
Oeu019179.1 Olea europaea HOM05D004480 ORTHO05D005546 1.0e-52 210.7 204 63.7
SGA_v2.0_scaffold25G11023 Striga asiatica HOM05D004480 ORTHO05D005546 1.5e-30 137.1 213 47.4
MSTRG.22059 Avicennia marina HOM05D004480 ORTHO05D005546 2.1e-29 133.3 223 46.2
SGA_v2.0_scaffold19G08907 Striga asiatica HOM05D004480 ORTHO05D005546 6.1e-29 131.7 205 49.3
SalBow1G2458 Salvia bowleyana HOM05D004480 ORTHO05D005546 8.0e-29 131.3 191 49.7
Dinv39175 Davidia involucrata HOM05D004480 ORTHO05D005546 3.4e-27 125.9 200 45.5
Cc03_g16200 Coffea canephora HOM05D004480 ORTHO05D005546 1.3e-26 124.0 196 44.9
Actinidia18384 Actinidia chinensis HOM05D004480 ORTHO05D005546 2.2e-26 123.2 194 46.9
Rhsim09G0001300 Rhododendron simsii HOM05D004480 ORTHO05D005546 5.4e-25 118.6 200 45.0
Duzib128G0969 Durio zibethinus HOM05D004480 ORTHO05D005546 1.6e-24 117.1 165 46.7
Thecc.05G221800 Theobroma cacao HOM05D004480 ORTHO05D005546 2.9e-23 112.8 192 44.3
CiPaw.01G203500 Carya illinoinensis HOM05D004480 ORTHO05D005546 3.8e-23 112.5 203 43.3
Cfa008538 Carpinus fangiana HOM05D004480 ORTHO05D005546 6.6e-23 111.7 203 41.4
Nitab4.5_0002844g0040 Nicotiana tabacum HOM05D004480 ORTHO05D005546 6.6e-23 111.7 184 44.0
Sopen01g003100 Solanum pennellii HOM05D004480 ORTHO05D005546 6.6e-23 111.7 191 41.9
Duzib177G0198 Durio zibethinus HOM05D004480 ORTHO05D005546 1.1e-22 110.9 192 45.3
vmacro00734 Vaccinium macrocarpon HOM05D004480 ORTHO05D005546 1.5e-22 110.5 194 43.8
Migut.N03010 Erythranthe guttata HOM05D004480 ORTHO05D005546 2.5e-22 109.8 202 43.1
CAN.G574.17 Capsicum annuum HOM05D004480 ORTHO05D005546 4.3e-22 109.0 190 44.7
arahy.Tifrunner.gnm1.ann1.0BX3U4 Arachis hypogaea HOM05D004480 ORTHO05D005546 5.6e-22 108.6 176 44.9
Peaxi162Scf00586g00512 Petunia axillaris HOM05D004480 ORTHO05D005546 7.3e-22 108.2 159 49.1
Lju124A7T25 Lonicera japonica HOM05D004480 ORTHO05D005546 9.5e-22 107.8 169 47.3
Manes.17G005700 Manihot esculenta HOM05D004480 ORTHO05D005546 1.2e-21 107.5 200 40.5
Nn7g35785 Nelumbo nucifera HOM05D004480 ORTHO05D005546 1.2e-21 107.5 199 42.7
Nitab4.5_0002686g0020 Nicotiana tabacum HOM05D004480 ORTHO05D005546 1.6e-21 107.1 184 43.5
QL11p020579 Quercus lobata HOM05D004480 ORTHO05D005546 1.6e-21 107.1 198 42.9
PGR119G0799 Punica granatum HOM05D004480 ORTHO05D005546 2.1e-21 106.7 192 45.8
Hma1.2p1_0513F.1_g169740 Hydrangea macrophylla HOM05D004480 ORTHO05D005546 4.7e-21 105.5 201 44.8
MD01G1035500 Malus domestica HOM05D004480 ORTHO05D005546 8.0e-21 104.8 199 42.7
PGR083G0026 Punica granatum HOM05D004480 ORTHO05D005546 1.0e-20 104.4 192 44.8
vmacro20035 Vaccinium macrocarpon HOM05D004480 ORTHO05D005546 1.0e-20 104.4 195 44.6
Ca_17076_v3 Cicer arietinum L. HOM05D004480 ORTHO05D005546 1.4e-20 104.0 185 43.8
Potri.017G001100 Populus trichocarpa HOM05D004480 ORTHO05D005546 3.0e-20 102.8 196 38.8
COL.COLO4_23990 Corchorus olitorius HOM05D004480 ORTHO05D005546 5.2e-20 102.1 158 48.7
CsaV3_3G003300 Cucumis sativus L. HOM05D004480 ORTHO05D005546 5.2e-20 102.1 205 40.5
Atru.chr11.1453 Acer truncatum HOM05D004480 ORTHO05D005546 6.8e-20 101.7 195 41.5
Atru.chr11.1483 Acer truncatum HOM05D004480 ORTHO05D005546 6.8e-20 101.7 195 41.5
GSVIVG01038269001 Vitis vinifera HOM05D004480 ORTHO05D005546 6.8e-20 101.7 199 38.2
Gohir.A08G013400 Gossypium hirsutum HOM05D004480 ORTHO05D005546 1.2e-19 100.9 189 42.9
Sc03g0007800 Simmondsia chinensis HOM05D004480 ORTHO05D005546 1.2e-19 100.9 181 44.2
Gohir.D08G023800 Gossypium hirsutum HOM05D004480 ORTHO05D005546 1.5e-19 100.5 189 42.9
MD15G1320300 Malus domestica HOM05D004480 ORTHO05D005546 2.0e-19 100.1 199 40.7
PGSC0003DMG400021321 Solanum tuberosum HOM05D004480 ORTHO05D005546 2.6e-19 99.8 188 42.0
Lj1g0018422 Lotus japonicus HOM05D004480 ORTHO05D005546 3.4e-19 99.4 189 41.3
Solyc01g007120.3 Solanum lycopersicum HOM05D004480 ORTHO05D005546 3.4e-19 99.4 186 40.9
Gorai.004G019100 Gossypium raimondii HOM05D004480 ORTHO05D005546 4.4e-19 99.0 189 42.3
CSS0010781 Camellia sinensis var. sinensis HOM05D004480 ORTHO05D005546 7.5e-19 98.2 201 40.3
HanXRQChr14g0458331 Helianthus annuus HOM05D004480 ORTHO05D005546 7.5e-19 98.2 195 42.1
HanXRQChr15g0465141 Helianthus annuus HOM05D004480 ORTHO05D005546 7.5e-19 98.2 195 43.1
MELO3C013997.2 Cucumis melo HOM05D004480 ORTHO05D005546 1.3e-18 97.4 205 38.5
Phvul.001G227600 Phaseolus vulgaris HOM05D004480 ORTHO05D005546 1.3e-18 97.4 189 40.2
Eucgr.H00240 Eucalyptus grandis HOM05D004480 ORTHO05D005546 1.7e-18 97.1 190 43.2
Glyma.18G043300 Glycine max HOM05D004480 ORTHO05D005546 2.2e-18 96.7 189 39.7
SalBow6G1632 Salvia bowleyana HOM05D004480 ORTHO05D005546 2.2e-18 96.7 196 41.3
Sed0006001 Sechium edule HOM05D004480 ORTHO05D005546 2.9e-18 96.3 207 39.6
unitig_62.g23773 Utricularia gibba HOM05D004480 ORTHO05D005546 2.9e-18 96.3 202 40.1
Ciclev10008180m.g Citrus clementina HOM05D004480 ORTHO05D005546 3.7e-18 95.9 202 38.1
AUR62001702 Chenopodium quinoa HOM05D004480 ORTHO05D005546 8.3e-18 94.7 161 41.0
Hund12181 Selenicereus undatus HOM05D004480 ORTHO05D005546 1.8e-17 93.6 197 39.1
Lalb_Chr08g0233091 Lupinus albus HOM05D004480 ORTHO05D005546 2.4e-17 93.2 193 42.0
Medtr4g094615 Medicago truncatula HOM05D004480 ORTHO05D005546 2.4e-17 93.2 189 39.7
Prupe.5G084300 Prunus persica HOM05D004480 ORTHO05D005546 5.4e-17 92.0 217 38.2
A03p48230 Brassica napus HOM05D004480 ORTHO05D005546 1.2e-16 90.9 187 38.5
CDE09G0674 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 1.6e-16 90.5 175 38.9
FAN01G1951 Fragaria x ananassa HOM05D004480 ORTHO05D005546 1.6e-16 90.5 193 37.3
MBI07_g30868_MAGBIO Magnolia biondii HOM05D004480 ORTHO05D005546 1.6e-16 90.5 227 36.1
FvH4_4g10760 Fragaria vesca HOM05D004480 ORTHO05D005546 2.0e-16 90.1 164 40.2
CDE09G1409 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 3.5e-16 89.4 175 38.9
RcHm_v2.0_Chr1g0334711 Rosa chinensis HOM05D004480 ORTHO05D005546 5.9e-16 88.6 197 37.1
BcaB01g00536 Brassica carinata HOM05D004480 ORTHO05D005546 7.8e-16 88.2 192 38.5
FAN03G0050 Fragaria x ananassa HOM05D004480 ORTHO05D005546 7.8e-16 88.2 204 38.7
FAN12G3644 Fragaria x ananassa HOM05D004480 ORTHO05D005546 1.0e-15 87.8 164 40.2
RcHm_v2.0_Chr7g0210541 Rosa chinensis HOM05D004480 ORTHO05D005546 1.0e-15 87.8 197 36.0
THA.LOC104827565 Tarenaya hassleriana HOM05D004480 ORTHO05D005546 1.7e-15 87.0 195 38.5
BraA03t13931Z Brassica rapa HOM05D004480 ORTHO05D005546 2.3e-15 86.7 193 37.8
ClCG10G003270 Citrullus lanatus HOM05D004480 ORTHO05D005546 3.9e-15 85.9 235 34.5
Lsat_1_v5_gn_5_33821 Lactuca sativa HOM05D004480 ORTHO05D005546 5.0e-15 85.5 189 40.2
BraA01t02261Z Brassica rapa HOM05D004480 ORTHO05D005546 1.9e-14 83.6 199 36.7
BcaNung06395 Brassica carinata HOM05D004480 ORTHO05D005546 2.5e-14 83.2 181 37.0
A01p23550 Brassica napus HOM05D004480 ORTHO05D005546 2.5e-14 83.2 186 37.6
C01p29210 Brassica napus HOM05D004480 ORTHO05D005546 2.5e-14 83.2 181 37.0
BcaC06g33042 Brassica carinata HOM05D004480 ORTHO05D005546 5.6e-14 82.0 186 37.6
AUR62020079 Chenopodium quinoa HOM05D004480 ORTHO05D005546 5.6e-14 82.0 193 36.8
TPR.G4936 Trifolium pratense HOM05D004480 ORTHO05D005546 7.3e-14 81.6 191 40.8
BolC1t02850H Brassica oleracea HOM05D004480 ORTHO05D005546 1.6e-13 80.5 198 36.9
Dinv41802 Davidia involucrata HOM05D004480 ORTHO05D005546 1.6e-13 80.5 89 51.7
BolC8t50268H Brassica oleracea HOM05D004480 ORTHO05D005546 2.8e-13 79.7 195 37.4
BraA09t39892Z Brassica rapa HOM05D004480 ORTHO05D005546 2.8e-13 79.7 195 38.5
C07p46260 Brassica napus HOM05D004480 ORTHO05D005546 4.7e-13 79.0 187 37.4
Sabra17G0005500 Salix brachista HOM05D000001 ORTHO05D005546 4.7e-13 79.0 58 65.5
TWI74G1000 Tripterygium wilfordii HOM05D004480 ORTHO05D005546 4.7e-13 79.0 199 37.7
A09p44300 Brassica napus HOM05D004480 ORTHO05D005546 6.2e-13 78.6 192 38.5
C08p26540 Brassica napus HOM05D004480 ORTHO05D005546 1.4e-12 77.4 194 38.1
arahy.Tifrunner.gnm1.ann1.JT43NG Arachis hypogaea HOM05D004480 ORTHO05D005546 3.1e-12 76.3 158 42.4
VMungo1383G0315 Vigna mungo HOM05D004480 ORTHO05D005546 4.0e-12 75.9 188 38.3
BcaNung00392 Brassica carinata HOM05D004480 ORTHO05D005546 6.8e-12 75.1 186 36.6
Sp5g10950 Schrenkiella parvula HOM05D004480 ORTHO05D005546 1.2e-11 74.3 193 34.7
AL5G31690 Arabidopsis lyrata HOM05D004480 ORTHO05D005546 2.6e-11 73.2 184 37.0
ClCG00G000020 Citrullus lanatus HOM05D004480 ORTHO05D005546 2.6e-11 73.2 113 43.4
HPP92_020625 Vanilla planifolia HOM05D004480 ORTHO05D005546 9.8e-11 71.2 201 34.8
TAR626G1520 Trochodendron aralioides HOM05D004480 ORTHO05D005546 1.7e-10 70.5 231 32.5
FAN12G1968 Fragaria x ananassa HOM05D004480 ORTHO05D005546 2.2e-10 70.1 149 36.9
BolC7t45142H Brassica oleracea HOM05D004480 ORTHO05D005546 3.7e-10 69.3 185 36.2
FAN06G1845 Fragaria x ananassa HOM05D004480 ORTHO05D005546 3.7e-10 69.3 188 36.2
FAN10G1488 Fragaria x ananassa HOM05D004480 ORTHO05D005546 3.7e-10 69.3 188 36.2
VMungo1309G1911 Vigna mungo HOM05D004480 ORTHO05D005546 3.7e-10 69.3 189 38.1
Psat7g090480 Pisum sativum HOM05D004480 ORTHO05D005546 4.9e-10 68.9 125 42.4
HanXRQChr15g0464981 Helianthus annuus HOM05D004480 ORTHO05D005546 6.4e-10 68.6 58 67.2
Carub.0005s1764 Capsella rubella HOM05D004480 ORTHO05D005546 1.1e-09 67.8 189 34.9
TAR623G1647 Trochodendron aralioides HOM05D004480 ORTHO05D005546 2.4e-09 66.6 231 31.6
Haze_11102 Corylus avellana HOM05D004480 ORTHO05D005546 5.4e-09 65.5 133 39.1
CANSAT21G2297 Cannabis sativa HOM05D004480 ORTHO05D005546 9.2e-09 64.7 203 33.5
Glyma.11G213400 Glycine max HOM05D004480 ORTHO05D005546 9.2e-09 64.7 96 43.8
CARHR160850 Cardamine hirsuta HOM05D004480 ORTHO05D005546 1.2e-08 64.3 194 34.5
Sed0005158 Sechium edule HOM05D004480 ORTHO05D005546 3.5e-08 62.8 115 45.2
ECA248G1292 Erigeron canadensis HOM05D004480 ORTHO05D005546 4.6e-08 62.4 187 34.8
ClCG00G001030 Citrullus lanatus HOM05D004480 ORTHO05D005546 7.8e-08 61.6 110 41.8
THA.LOC104802357 Tarenaya hassleriana HOM05D004480 ORTHO05D005546 1.7e-07 60.5 188 34.6
CDE09G0134 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 3.0e-07 59.7 60 55.0
SHI53263 Sapria himalayana HOM05D004480 ORTHO05D005546 3.9e-07 59.3 65 50.8
Thhalv10010355m.g Eutrema salsugineum HOM05D004480 ORTHO05D005546 5.0e-07 58.9 194 32.5
Migut.O00494 Erythranthe guttata HOM05D004480 ORTHO05D005546 8.6e-07 58.2 142 35.2
CDE02G0168 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 3.3e-06 56.2 89 46.1
Mapoly0052s0036 Marchantia polymorpha HOM05D004480 ORTHO05D005546 9.5e-06 54.7 178 28.7


User provided reference genes

Program Settings