Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060950.1 Olea europaea HOM05D003606 ORTHO05D016710 1.0e-115 420.2 194 100.0
Ah.10g038660 Amaranthus hybridus HOM05D003606 ORTHO05D004650 1.6e-55 220.3 184 63.0
HPP92_026819 Vanilla planifolia HOM05D003606 ORTHO05D004650 5.8e-42 175.3 121 67.8
Ciclev10015115m.g Citrus clementina HOM05D003606 ORTHO05D004650 2.4e-40 169.9 186 52.7
SalBow4G1900 Salvia bowleyana HOM05D003606 ORTHO05D004650 5.4e-40 168.7 186 50.5
A10p10270 Brassica napus HOM05D003606 ORTHO05D004650 2.3e-38 163.3 183 48.6
BraA10t43107Z Brassica rapa HOM05D003606 ORTHO05D004650 2.3e-38 163.3 183 48.6
Actinidia02534 Actinidia chinensis HOM05D000009 ORTHO05D004650 3.9e-38 162.5 185 50.3
RcHm_v2.0_Chr1g0317321 Rosa chinensis HOM05D003606 ORTHO05D004650 5.1e-38 162.2 186 48.9
SGA_v2.0_scaffold138G35254 Striga asiatica HOM05D003606 ORTHO05D004650 8.6e-38 161.4 183 51.4
FvH4_7g01500 Fragaria vesca HOM05D003606 ORTHO05D004650 7.3e-37 158.3 186 48.4
FAN01G0800 Fragaria x ananassa HOM05D003606 ORTHO05D004650 7.3e-37 158.3 186 48.4
FAN03G2659 Fragaria x ananassa HOM05D003606 ORTHO05D004650 7.3e-37 158.3 186 48.4
FAN10G3084 Fragaria x ananassa HOM05D003606 ORTHO05D004650 7.3e-37 158.3 186 48.4
arahy.Tifrunner.gnm1.ann1.ZXEF1Z Arachis hypogaea HOM05D003606 ORTHO05D004650 9.5e-37 157.9 117 63.2
MSTRG.2635 Avicennia marina HOM05D003606 ORTHO05D004650 3.6e-36 156.0 185 49.7
Cpa.g.sc19.249 Carica papaya HOM05D003606 ORTHO05D004650 3.6e-36 156.0 186 48.9
FAN06G2132 Fragaria x ananassa HOM05D003606 ORTHO05D004650 3.6e-36 156.0 186 47.8
Dinv09318 Davidia involucrata HOM05D003606 ORTHO05D004650 6.2e-36 155.2 185 49.7
Cc02_g29020 Coffea canephora HOM05D003606 ORTHO05D004650 1.2e-34 151.0 186 47.8
PGR031G1688 Punica granatum HOM05D003606 ORTHO05D004650 1.5e-34 150.6 183 47.5
THA.LOC104819092 Tarenaya hassleriana HOM05D003606 ORTHO05D004650 2.0e-34 150.2 186 45.7
Peaxi162Scf00089g01530 Petunia axillaris HOM05D003606 ORTHO05D004650 4.4e-34 149.1 186 46.8
Manes.10G139000 Manihot esculenta HOM05D003606 ORTHO05D004650 5.8e-34 148.7 184 48.4
Duzib138G0203 Durio zibethinus HOM05D003606 ORTHO05D004650 7.6e-34 148.3 186 46.8
Sabra09G0042600 Salix brachista HOM05D003606 ORTHO05D004650 9.9e-34 147.9 186 47.3
Migut.D00412 Erythranthe guttata HOM05D003606 ORTHO05D004650 1.3e-33 147.5 186 46.8
Nn5g28763 Nelumbo nucifera HOM05D003606 ORTHO05D004650 1.3e-33 147.5 186 47.3
Phvul.004G092500 Phaseolus vulgaris HOM05D003606 ORTHO05D004650 1.3e-33 147.5 185 45.9
GSVIVG01032166001 Vitis vinifera HOM05D003606 ORTHO05D004650 1.3e-33 147.5 184 48.4
SGA_v2.0_scaffold90G27689 Striga asiatica HOM05D003606 ORTHO05D004650 1.7e-33 147.1 186 47.3
Glyma.16G165100 Glycine max HOM05D003606 ORTHO05D004650 2.2e-33 146.7 185 45.4
Gohir.A08G142700 Gossypium hirsutum HOM05D003606 ORTHO05D004650 2.2e-33 146.7 184 47.3
Gohir.D08G163700 Gossypium hirsutum HOM05D003606 ORTHO05D004650 2.2e-33 146.7 184 47.3
Gorai.004G170600 Gossypium raimondii HOM05D003606 ORTHO05D004650 2.2e-33 146.7 184 47.3
ClCG10G012220 Citrullus lanatus HOM05D003606 ORTHO05D004650 2.9e-33 146.4 192 46.4
SGA_v2.0_scaffold1G00601 Striga asiatica HOM05D003606 ORTHO05D004650 2.9e-33 146.4 185 47.6
Glyma.02G080600 Glycine max HOM05D003606 ORTHO05D004650 3.8e-33 146.0 185 45.4
Cfa010803 Carpinus fangiana HOM05D003606 ORTHO05D004650 4.9e-33 145.6 186 46.8
BcaB08g35635 Brassica carinata HOM05D003606 ORTHO05D004650 6.4e-33 145.2 188 46.3
Haze_03155 Corylus avellana HOM05D003606 ORTHO05D004650 8.4e-33 144.8 185 47.0
QL06p005538 Quercus lobata HOM05D003606 ORTHO05D004650 8.4e-33 144.8 186 44.6
arahy.Tifrunner.gnm1.ann1.V59V4E Arachis hypogaea HOM05D003606 ORTHO05D004650 1.4e-32 144.1 185 44.9
Thecc.01G407200 Theobroma cacao HOM05D003606 ORTHO05D004650 1.4e-32 144.1 184 47.3
Manes.07G008500 Manihot esculenta HOM05D003606 ORTHO05D004650 1.9e-32 143.7 182 46.7
TWI32G0899 Tripterygium wilfordii HOM05D003606 ORTHO05D004650 1.9e-32 143.7 186 45.7
BcaC04g20537 Brassica carinata HOM05D003606 ORTHO05D004650 2.4e-32 143.3 178 48.3
Eucgr.G03357 Eucalyptus grandis HOM05D003606 ORTHO05D004650 2.4e-32 143.3 186 45.2
MELO3C023992.2 Cucumis melo HOM05D003606 ORTHO05D004650 3.2e-32 142.9 186 45.7
CsaV3_3G031990 Cucumis sativus L. HOM05D003606 ORTHO05D004650 3.2e-32 142.9 186 45.7
Potri.009G058000 Populus trichocarpa HOM05D003606 ORTHO05D004650 3.2e-32 142.9 186 46.2
Hund00228 Selenicereus undatus HOM05D003606 ORTHO05D004650 3.2e-32 142.9 193 42.5
Dinv43413 Davidia involucrata HOM05D003606 ORTHO05D004650 4.2e-32 142.5 183 47.0
Nitab4.5_0001284g0090 Nicotiana tabacum HOM05D003606 ORTHO05D004650 5.4e-32 142.1 186 45.2
Prupe.2G020500 Prunus persica HOM05D003606 ORTHO05D004650 5.4e-32 142.1 183 47.0
COL.COLO4_04879 Corchorus olitorius HOM05D003606 ORTHO05D004650 9.2e-32 141.4 185 45.4
Sc23g0005910 Simmondsia chinensis HOM05D003606 ORTHO05D004650 1.2e-31 141.0 183 46.4
VMungo0464G1676 Vigna mungo HOM05D003606 ORTHO05D004650 1.2e-31 141.0 185 44.9
AUR62023088 Chenopodium quinoa HOM05D003606 ORTHO05D004650 1.6e-31 140.6 186 44.1
AUR62029807 Chenopodium quinoa HOM05D003606 ORTHO05D004650 1.6e-31 140.6 186 44.1
CDE02G3858 Ceratophyllum demersum HOM05D003606 ORTHO05D004650 2.1e-31 140.2 186 44.6
Ca_19553_v3 Cicer arietinum L. HOM05D003606 ORTHO05D004650 2.7e-31 139.8 186 45.7
TPR.G14490 Trifolium pratense HOM05D003606 ORTHO05D004650 2.7e-31 139.8 186 45.2
TWI34G0860 Tripterygium wilfordii HOM05D003606 ORTHO05D004650 2.7e-31 139.8 185 44.9
A02p11600 Brassica napus HOM05D003606 ORTHO05D004650 3.5e-31 139.4 181 42.5
BraA02t06222Z Brassica rapa HOM05D003606 ORTHO05D004650 3.5e-31 139.4 181 42.5
Lj5g0022697 Lotus japonicus HOM05D003606 ORTHO05D004650 3.5e-31 139.4 184 43.5
Solyc03g112530.3 Solanum lycopersicum HOM05D003606 ORTHO05D004650 3.5e-31 139.4 186 45.2
Sopen03g031590 Solanum pennellii HOM05D003606 ORTHO05D004650 3.5e-31 139.4 186 45.2
PGSC0003DMG400018107 Solanum tuberosum HOM05D003606 ORTHO05D004650 3.5e-31 139.4 186 45.2
arahy.Tifrunner.gnm1.ann1.GAUK41 Arachis hypogaea HOM05D003606 ORTHO05D004650 4.6e-31 139.0 184 44.0
PSO541G2647 Papaver somniferum HOM05D003606 ORTHO05D004650 6.0e-31 138.7 186 43.0
BcaB05g21983 Brassica carinata HOM05D003606 ORTHO05D004650 7.8e-31 138.3 181 42.5
BcaC03g14497 Brassica carinata HOM05D003606 ORTHO05D004650 7.8e-31 138.3 181 42.5
C02p19350 Brassica napus HOM05D003606 ORTHO05D004650 7.8e-31 138.3 181 42.5
BolC2t08070H Brassica oleracea HOM05D003606 ORTHO05D004650 7.8e-31 138.3 181 42.5
Thhalv10013442m.g Eutrema salsugineum HOM05D003606 ORTHO05D004650 7.8e-31 138.3 181 42.5
AUR62009405 Chenopodium quinoa HOM05D003606 ORTHO05D004650 1.0e-30 137.9 184 43.5
HanXRQChr17g0563081 Helianthus annuus HOM05D003606 ORTHO05D004650 1.3e-30 137.5 186 45.2
Atru.chr11.2590 Acer truncatum HOM05D003606 ORTHO05D004650 1.7e-30 137.1 183 46.4
arahy.Tifrunner.gnm1.ann1.F9F3MK Arachis hypogaea HOM05D003606 ORTHO05D004650 1.7e-30 137.1 184 42.9
Lj3A990T71 Lonicera japonica HOM05D003606 ORTHO05D004650 1.7e-30 137.1 181 44.8
MD02G1305600 Malus domestica HOM05D003606 ORTHO05D004650 1.7e-30 137.1 186 45.2
Oeu025828.1 Olea europaea HOM05D003606 ORTHO05D004650 1.7e-30 137.1 84 76.2
PSO675G6796 Papaver somniferum HOM05D003606 ORTHO05D004650 1.7e-30 137.1 186 42.5
CiPaw.05G162700 Carya illinoinensis HOM05D003606 ORTHO05D004650 3.0e-30 136.3 186 44.1
BcaC06g33533 Brassica carinata HOM05D003606 ORTHO05D004650 3.9e-30 136.0 186 41.4
Medtr1g054300 Medicago truncatula HOM05D003606 ORTHO05D004650 3.9e-30 136.0 186 44.6
Psat6g110240 Pisum sativum HOM05D003606 ORTHO05D004650 3.9e-30 136.0 186 44.1
Sp6g14980 Schrenkiella parvula HOM05D003606 ORTHO05D004650 3.9e-30 136.0 181 42.0
C07p48580 Brassica napus HOM05D003606 ORTHO05D004650 5.1e-30 135.6 186 41.4
CiPaw.05G024300 Carya illinoinensis HOM05D003606 ORTHO05D004650 5.1e-30 135.6 183 45.4
AT5G52820 Arabidopsis thaliana HOM05D003606 ORTHO05D004650 6.6e-30 135.2 181 40.9
BolC7t45366H Brassica oleracea HOM05D003606 ORTHO05D004650 6.6e-30 135.2 186 41.4
Carub.0008s1298 Capsella rubella HOM05D003606 ORTHO05D004650 8.7e-30 134.8 181 40.9
vmacro13693 Vaccinium macrocarpon HOM05D003606 ORTHO05D004650 8.7e-30 134.8 183 45.9
AL8G27260 Arabidopsis lyrata HOM05D003606 ORTHO05D004650 1.9e-29 133.7 181 40.3
Aa31LG3G9060 Aethionema arabicum HOM05D003606 ORTHO05D004650 2.5e-29 133.3 181 42.5
COL.COLO4_04880 Corchorus olitorius HOM05D003606 ORTHO05D004650 3.3e-29 132.9 187 44.4
Lalb_Chr21g0315701 Lupinus albus HOM05D003606 ORTHO05D004650 4.3e-29 132.5 186 41.4
ATR0626G036 Amborella trichopoda HOM05D003606 ORTHO05D004650 5.6e-29 132.1 185 43.8
A10p29890 Brassica napus HOM05D003606 ORTHO05D004650 7.3e-29 131.7 136 47.8
CAN.G338.7 Capsicum annuum HOM05D003606 ORTHO05D004650 9.6e-29 131.3 187 43.9
Os11g0594200 Oryza sativa ssp. japonica HOM05D003606 ORTHO05D004650 1.6e-28 130.6 185 42.2
Sed0024972 Sechium edule HOM05D003606 ORTHO05D004650 1.6e-28 130.6 185 42.7
CARHR265750 Cardamine hirsuta HOM05D003606 ORTHO05D004650 2.1e-28 130.2 180 40.6
DCAR_003761 Daucus carota HOM05D003606 ORTHO05D004650 2.1e-28 130.2 184 44.0
Thhalv10025051m.g Eutrema salsugineum HOM05D003606 ORTHO05D004650 2.1e-28 130.2 186 40.3
Aqoxy2G00153 Aquilegia oxysepala HOM05D003606 ORTHO05D004650 2.8e-28 129.8 183 43.2
Rhsim07G0058400 Rhododendron simsii HOM05D003606 ORTHO05D004650 2.8e-28 129.8 183 44.3
SMO259G0032 Selaginella moellendorffii HOM05D003606 ORTHO05D004650 2.8e-28 129.8 182 43.4
ECA234G3512 Erigeron canadensis HOM05D003606 ORTHO05D004650 3.6e-28 129.4 185 44.9
Ca_22822_v3 Cicer arietinum L. HOM05D003606 ORTHO05D000002 4.7e-28 129.0 72 83.3
MD17G1287700 Malus domestica HOM05D003606 ORTHO05D004650 4.7e-28 129.0 183 43.7
Os10g0104500 Oryza sativa ssp. japonica HOM05D003606 ORTHO05D004650 4.7e-28 129.0 185 41.6
TAR633G2243 Trochodendron aralioides HOM05D003606 ORTHO05D004650 4.7e-28 129.0 180 44.4
TPR.G7603 Trifolium pratense HOM05D003606 ORTHO05D004650 6.2e-28 128.6 189 42.9
Zm00001eb297740 Zea mays HOM05D003606 ORTHO05D004650 4.0e-27 125.9 185 40.0
MD09G1280600 Malus domestica HOM05D003606 ORTHO05D004650 5.3e-27 125.6 180 43.9
HanXRQChr16g0524861 Helianthus annuus HOM05D003606 ORTHO05D004650 9.0e-27 124.8 181 42.5
Lsat_1_v5_gn_4_31941 Lactuca sativa HOM05D003606 ORTHO05D004650 9.0e-27 124.8 181 43.1
CSS0038697 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D016710 2.0e-26 123.6 69 79.7
C09p42410 Brassica napus HOM05D003606 ORTHO05D004650 9.9e-26 121.3 114 56.1
BolC9t57121H Brassica oleracea HOM05D003606 ORTHO05D004650 9.9e-26 121.3 114 56.1
SHI00285 Sapria himalayana HOM05D003606 ORTHO05D004650 2.9e-25 119.8 223 36.8
Hund21610 Selenicereus undatus HOM05D003606 ORTHO05D004650 2.9e-25 119.8 191 41.9
C02p14020 Brassica napus HOM05D003606 ORTHO05D016710 4.9e-25 119.0 127 44.9
CANSAT01G2566 Cannabis sativa HOM05D003606 ORTHO05D004650 8.4e-25 118.2 186 40.3
C09p70260 Brassica napus HOM05D003606 ORTHO05D004650 1.4e-24 117.5 183 39.3
BcaNung04664 Brassica carinata HOM05D003606 ORTHO05D004650 1.9e-24 117.1 143 42.7
BraA10t45027Z Brassica rapa HOM05D003606 ORTHO05D004650 1.9e-24 117.1 156 40.4
BcaNung04849 Brassica carinata HOM05D003606 ORTHO05D004650 7.1e-24 115.2 183 38.8
BolC9t59770H Brassica oleracea HOM05D003606 ORTHO05D004650 7.1e-24 115.2 183 38.8
SEGI_00890 Sequoiadendron giganteum HOM05D003606 ORTHO05D004650 7.1e-24 115.2 180 39.4
PSO541G4704 Papaver somniferum HOM05D003606 ORTHO05D004650 2.8e-20 103.2 171 38.6
SalBow4G2833 Salvia bowleyana HOM05D003606 ORTHO05D004650 1.1e-19 101.3 151 41.1
CBR_g38286 Chara braunii HOM05D003606 ORTHO05D004650 3.1e-19 99.8 186 33.9
BcaC06g32566 Brassica carinata HOM05D003606 ORTHO05D004650 2.9e-17 93.2 114 42.1
BcaNung05838 Brassica carinata HOM05D003606 ORTHO05D004650 2.9e-17 93.2 114 42.1
MCO05G213 Micromonas commoda HOM05D003606 ORTHO05D004650 1.4e-16 90.9 186 32.3
BolC2t06237H Brassica oleracea HOM05D003606 ORTHO05D016710 1.9e-16 90.5 104 43.3
CSS0038500 Camellia sinensis var. sinensis HOM05D043631 ORTHO05D016710 2.4e-16 90.1 109 47.7
C03p42670 Brassica napus HOM05D003606 ORTHO05D016710 3.2e-16 89.7 104 43.3
C03p67300 Brassica napus HOM05D003606 ORTHO05D016710 3.2e-16 89.7 104 43.3
BolSC21t60295H Brassica oleracea HOM05D003606 ORTHO05D016710 3.2e-16 89.7 104 43.3
Nitab4.5_0012005g0010 Nicotiana tabacum HOM05D003606 ORTHO05D004650 5.4e-16 89.0 176 34.7
CSS0016432 Camellia sinensis var. sinensis HOM05D043631 ORTHO05D108967 9.3e-16 88.2 59 72.9
AagrBONN_evm.TU.Sc2ySwM_344.4930 Anthoceros agrestis HOM05D003606 ORTHO05D004650 2.7e-15 86.7 180 32.8
PRCOL_00003575 Prasinoderma coloniale HOM05D003606 ORTHO05D004650 6.0e-15 85.5 186 33.3
Haze_26363 Corylus avellana HOM05D003606 ORTHO05D004650 1.3e-14 84.3 187 29.4
Mapoly0082s0085 Marchantia polymorpha HOM05D003606 ORTHO05D004650 1.1e-13 81.3 180 32.2
Pp3c1_35350 Physcomitrium patens HOM05D003606 ORTHO05D004650 1.9e-13 80.5 180 31.1
BolC2t07520H Brassica oleracea HOM05D003606 ORTHO05D016710 1.3e-09 67.8 93 36.6
HanXRQChr15g0491881 Helianthus annuus HOM05D003606 ORTHO05D004650 2.9e-09 66.6 36 77.8
Cfa026891 Carpinus fangiana HOM05D003606 ORTHO05D004650 3.2e-08 63.2 181 27.1
BcaC01g02187 Brassica carinata HOM05D003606 ORTHO05D016710 2.1e-07 60.5 146 30.1
CANSAT51G0014 Cannabis sativa HOM05D003606 ORTHO05D004650 2.7e-07 60.1 29 86.2


User provided reference genes

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