Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060463.1 Olea europaea HOM05D000481 ORTHO05D003804 7.2e-43 176.8 86 100.0
Oeu060464.1 Olea europaea HOM05D000481 ORTHO05D003804 2.0e-16 89.0 44 97.7
CiPaw.06G003000 Carya illinoinensis HOM05D000481 ORTHO05D003804 3.7e-15 84.7 43 93.0
EL10Ac3g05429 Beta vulgaris HOM05D000481 ORTHO05D003804 4.8e-15 84.3 44 86.4
SalBow4G1927 Salvia bowleyana HOM05D000481 ORTHO05D003804 4.8e-15 84.3 43 93.0
Ca_20084_v3 Cicer arietinum L. HOM05D000481 ORTHO05D003804 6.3e-15 84.0 44 88.6
SalBow2G3393 Salvia bowleyana HOM05D000481 ORTHO05D003804 6.3e-15 84.0 43 93.0
TWI23G0935 Tripterygium wilfordii HOM05D000481 ORTHO05D003804 6.3e-15 84.0 43 90.7
CSS0027480 Camellia sinensis var. sinensis HOM05D000481 ORTHO05D003804 8.3e-15 83.6 43 90.7
CSS0035045 Camellia sinensis var. sinensis HOM05D000481 ORTHO05D003804 8.3e-15 83.6 43 90.7
Cc02_g02430 Coffea canephora HOM05D000481 ORTHO05D003804 8.3e-15 83.6 43 90.7
Dinv35248 Davidia involucrata HOM05D000481 ORTHO05D003804 8.3e-15 83.6 43 90.7
Duzib084G1260 Durio zibethinus HOM05D000481 ORTHO05D003804 8.3e-15 83.6 43 90.7
Gohir.A09G182500 Gossypium hirsutum HOM05D000481 ORTHO05D003804 8.3e-15 83.6 44 90.9
Gohir.D09G177100 Gossypium hirsutum HOM05D000481 ORTHO05D003804 8.3e-15 83.6 44 90.9
Gorai.006G199100 Gossypium raimondii HOM05D000481 ORTHO05D003804 8.3e-15 83.6 44 90.9
Lj8C18G16 Lonicera japonica HOM05D000481 ORTHO05D003804 8.3e-15 83.6 43 90.7
Lalb_Chr03g0034801 Lupinus albus HOM05D000481 ORTHO05D003804 8.3e-15 83.6 43 90.7
GSVIVG01028868001 Vitis vinifera HOM05D000481 ORTHO05D003804 8.3e-15 83.6 44 86.4
MSTRG.75 Avicennia marina HOM05D000481 ORTHO05D003804 1.4e-14 82.8 43 88.4
CSS0034028 Camellia sinensis var. sinensis HOM05D000481 ORTHO05D003804 1.4e-14 82.8 43 90.7
CSS0043947 Camellia sinensis var. sinensis HOM05D000481 ORTHO05D003804 1.4e-14 82.8 43 90.7
MBI11_g04752_MAGBIO Magnolia biondii HOM05D000481 ORTHO05D003804 1.4e-14 82.8 43 93.0
SGA_v2.0_scaffold10G05297 Striga asiatica HOM05D000481 ORTHO05D003804 1.4e-14 82.8 43 88.4
CDE07G1341 Ceratophyllum demersum HOM05D000481 ORTHO05D003804 1.8e-14 82.4 43 88.4
MD01G1207800 Malus domestica HOM05D000481 ORTHO05D003804 1.8e-14 82.4 43 88.4
MD07G1278400 Malus domestica HOM05D000481 ORTHO05D003804 1.8e-14 82.4 43 88.4
Hma1.2p1_0274F.1_g110190 Hydrangea macrophylla HOM05D000481 ORTHO05D003804 2.4e-14 82.0 43 88.4
Prupe.2G300300 Prunus persica HOM05D000481 ORTHO05D003804 2.4e-14 82.0 43 86.0
Ah.07g206600 Amaranthus hybridus HOM05D000481 ORTHO05D003804 3.1e-14 81.6 43 88.4
COL.COLO4_10061 Corchorus olitorius HOM05D000481 ORTHO05D003804 3.1e-14 81.6 43 88.4
DCAR_014518 Daucus carota HOM05D000481 ORTHO05D003804 3.1e-14 81.6 43 90.7
Lalb_Chr19g0130681 Lupinus albus HOM05D000481 ORTHO05D003804 3.1e-14 81.6 43 88.4
Peaxi162Scf00444g00120 Petunia axillaris HOM05D000481 ORTHO05D003804 3.1e-14 81.6 43 86.0
RcHm_v2.0_Chr1g0378231 Rosa chinensis HOM05D000481 ORTHO05D003804 3.1e-14 81.6 43 86.0
Solyc03g008010.3 Solanum lycopersicum HOM05D000481 ORTHO05D003804 3.1e-14 81.6 43 86.0
Sopen03g003940 Solanum pennellii HOM05D000481 ORTHO05D003804 3.1e-14 81.6 43 86.0
PGSC0003DMG400010126 Solanum tuberosum HOM05D000481 ORTHO05D003804 3.1e-14 81.6 43 86.0
Actinidia34153 Actinidia chinensis HOM05D000481 ORTHO05D003804 4.1e-14 81.3 43 88.4
Duzib068G1295 Durio zibethinus HOM05D000481 ORTHO05D003804 4.1e-14 81.3 43 86.0
Migut.F01088 Erythranthe guttata HOM05D000481 ORTHO05D003804 4.1e-14 81.3 44 86.4
HanXRQChr05g0130131 Helianthus annuus HOM05D000481 ORTHO05D003804 4.1e-14 81.3 43 88.4
Thecc.03G183500 Theobroma cacao HOM05D000481 ORTHO05D003804 4.1e-14 81.3 43 86.0
Ah.13g069140 Amaranthus hybridus HOM05D000481 ORTHO05D003804 5.4e-14 80.9 43 86.0
Cfa016282 Carpinus fangiana HOM05D000481 ORTHO05D003804 5.4e-14 80.9 42 90.5
Eucgr.K00293 Eucalyptus grandis HOM05D000481 ORTHO05D003804 5.4e-14 80.9 43 83.7
PGR042G0787 Punica granatum HOM05D000481 ORTHO05D003804 5.4e-14 80.9 43 83.7
QL09p012968 Quercus lobata HOM05D000481 ORTHO05D003804 5.4e-14 80.9 44 88.6
Hund09776 Selenicereus undatus HOM05D000481 ORTHO05D003804 5.4e-14 80.9 43 83.7
unitig_22.g5221 Utricularia gibba HOM05D000368 ORTHO05D003804 5.4e-14 80.9 44 84.1
BcaNung07308 Brassica carinata HOM05D000481 ORTHO05D003804 7.0e-14 80.5 43 81.4
A01p16920 Brassica napus HOM05D000481 ORTHO05D003804 7.0e-14 80.5 43 81.4
C01p21200 Brassica napus HOM05D000481 ORTHO05D003804 7.0e-14 80.5 43 81.4
BolC1t02045H Brassica oleracea HOM05D000481 ORTHO05D003804 7.0e-14 80.5 43 81.4
BraA01t01644Z Brassica rapa HOM05D000481 ORTHO05D003804 7.0e-14 80.5 43 81.4
CANSAT21G1604 Cannabis sativa HOM05D000481 ORTHO05D003804 7.0e-14 80.5 43 83.7
ClCG05G008330 Citrullus lanatus HOM05D000481 ORTHO05D003804 7.0e-14 80.5 43 86.0
MELO3C006941.2 Cucumis melo HOM05D000481 ORTHO05D003804 7.0e-14 80.5 43 86.0
CsaV3_3G017420 Cucumis sativus L. HOM05D000481 ORTHO05D003804 7.0e-14 80.5 43 86.0
Dinv28391 Davidia involucrata HOM05D000481 ORTHO05D003804 7.0e-14 80.5 43 88.4
Glyma.16G179500 Glycine max HOM05D000481 ORTHO05D003804 7.0e-14 80.5 43 83.7
Lsat_1_v5_gn_2_131280 Lactuca sativa HOM05D000481 ORTHO05D003804 7.0e-14 80.5 43 86.0
Phvul.004G109400 Phaseolus vulgaris HOM05D000481 ORTHO05D003804 7.0e-14 80.5 43 83.7
Sabra04G0053000 Salix brachista HOM05D000481 ORTHO05D003804 7.0e-14 80.5 46 84.8
Sed0008621 Sechium edule HOM05D000481 ORTHO05D003804 7.0e-14 80.5 43 86.0
vmacro06630 Vaccinium macrocarpon HOM05D000481 ORTHO05D003804 7.0e-14 80.5 44 86.4
VMungo0464G1795 Vigna mungo HOM05D000481 ORTHO05D003804 7.0e-14 80.5 43 83.7
Atru.chr1.380 Acer truncatum HOM05D000481 ORTHO05D003804 9.1e-14 80.1 43 83.7
Atru.ctg97_1.15 Acer truncatum HOM05D000481 ORTHO05D003804 9.1e-14 80.1 43 83.7
Cpa.g.sc107.103 Carica papaya HOM05D000481 ORTHO05D003804 9.1e-14 80.1 43 86.0
FvH4_7g30180 Fragaria vesca HOM05D000481 ORTHO05D003804 9.1e-14 80.1 43 83.7
FAN01G0907 Fragaria x ananassa HOM05D000481 ORTHO05D003804 9.1e-14 80.1 43 83.7
FAN03G1133 Fragaria x ananassa HOM05D000481 ORTHO05D003804 9.1e-14 80.1 43 83.7
FAN03G1262 Fragaria x ananassa HOM05D000481 ORTHO05D003804 9.1e-14 80.1 43 83.7
FAN06G0755 Fragaria x ananassa HOM05D000481 ORTHO05D003804 9.1e-14 80.1 43 83.7
FAN06G2535 Fragaria x ananassa HOM05D000481 ORTHO05D003804 9.1e-14 80.1 43 83.7
Medtr6g048290 Medicago truncatula HOM05D000481 ORTHO05D003804 9.1e-14 80.1 43 86.0
Nn6g33308 Nelumbo nucifera HOM05D000481 ORTHO05D003804 9.1e-14 80.1 43 86.0
Rhsim03G0190600 Rhododendron simsii HOM05D000481 ORTHO05D003804 9.1e-14 80.1 43 88.4
THA.LOC104811960 Tarenaya hassleriana HOM05D000481 ORTHO05D003804 9.1e-14 80.1 43 81.4
THA.LOC104825111 Tarenaya hassleriana HOM05D000481 ORTHO05D003804 9.1e-14 80.1 43 81.4
TPR.G33499 Trifolium pratense HOM05D000481 ORTHO05D003804 9.1e-14 80.1 43 86.0
TAR374G1275 Trochodendron aralioides HOM05D000481 ORTHO05D003804 9.1e-14 80.1 43 88.4
BcaNung07306 Brassica carinata HOM05D000481 ORTHO05D003804 1.2e-13 79.7 43 81.4
C01p21220 Brassica napus HOM05D000481 ORTHO05D003804 1.2e-13 79.7 43 81.4
BolC1t02048H Brassica oleracea HOM05D000481 ORTHO05D003804 1.2e-13 79.7 43 81.4
CAN.G126.11 Capsicum annuum HOM05D000481 ORTHO05D003804 1.2e-13 79.7 43 81.4
Manes.06G152000 Manihot esculenta HOM05D000481 ORTHO05D003804 1.2e-13 79.7 43 83.7
Sp7g23700 Schrenkiella parvula HOM05D000481 ORTHO05D003804 1.2e-13 79.7 43 81.4
Sp7g23720 Schrenkiella parvula HOM05D000481 ORTHO05D003804 1.2e-13 79.7 43 81.4
Actinidia08575 Actinidia chinensis HOM05D000481 ORTHO05D003804 1.6e-13 79.3 43 86.0
PSO478G0109 Papaver somniferum HOM05D000481 ORTHO05D003804 1.6e-13 79.3 44 84.1
PSO782G3050 Papaver somniferum HOM05D000481 ORTHO05D003804 1.6e-13 79.3 44 84.1
Potri.004G079800 Populus trichocarpa HOM05D000481 ORTHO05D003804 1.6e-13 79.3 43 88.4
arahy.Tifrunner.gnm1.ann1.AH10MI Arachis hypogaea HOM05D000481 ORTHO05D003804 2.0e-13 79.0 43 83.7
arahy.Tifrunner.gnm1.ann1.LAZQ16 Arachis hypogaea HOM05D000481 ORTHO05D003804 2.0e-13 79.0 43 83.7
AUR62031416 Chenopodium quinoa HOM05D000481 ORTHO05D003804 2.0e-13 79.0 43 81.4
Thhalv10026072m.g Eutrema salsugineum HOM05D000481 ORTHO05D003804 2.0e-13 79.0 43 81.4
FAN10G0986 Fragaria x ananassa HOM05D000481 ORTHO05D003804 2.0e-13 79.0 43 83.7
FAN10G2649 Fragaria x ananassa HOM05D000481 ORTHO05D003804 2.0e-13 79.0 43 83.7
Gohir.A09G043000 Gossypium hirsutum HOM05D000481 ORTHO05D003804 2.0e-13 79.0 43 86.0
Gohir.D09G043800 Gossypium hirsutum HOM05D000481 ORTHO05D003804 2.0e-13 79.0 43 86.0
Gorai.006G050800 Gossypium raimondii HOM05D000481 ORTHO05D003804 2.0e-13 79.0 43 86.0
HanXRQChr14g0462521 Helianthus annuus HOM05D000481 ORTHO05D003804 2.0e-13 79.0 43 86.0
Hma1.2p1_0327F.1_g126400 Hydrangea macrophylla HOM05D000481 ORTHO05D003804 2.0e-13 79.0 44 84.1
Sed0024355 Sechium edule HOM05D000481 ORTHO05D003804 2.0e-13 79.0 43 83.7
Sc19g0001300 Simmondsia chinensis HOM05D000481 ORTHO05D003804 2.0e-13 79.0 44 79.5
ATR0661G151 Amborella trichopoda HOM05D000481 ORTHO05D003804 2.7e-13 78.6 43 86.0
AL7G27400 Arabidopsis lyrata HOM05D000481 ORTHO05D003804 2.7e-13 78.6 43 79.1
AL7G27420 Arabidopsis lyrata HOM05D000481 ORTHO05D003804 2.7e-13 78.6 43 79.1
AT4G25660 Arabidopsis thaliana HOM05D000481 ORTHO05D003804 2.7e-13 78.6 43 79.1
AT4G25680 Arabidopsis thaliana HOM05D000481 ORTHO05D003804 2.7e-13 78.6 43 79.1
BcaB03g12483 Brassica carinata HOM05D000481 ORTHO05D003804 2.7e-13 78.6 43 79.1
BcaC07g38206 Brassica carinata HOM05D000481 ORTHO05D003804 2.7e-13 78.6 43 79.1
A08p21020 Brassica napus HOM05D000481 ORTHO05D003804 2.7e-13 78.6 43 79.1
C08p09610 Brassica napus HOM05D000481 ORTHO05D003804 2.7e-13 78.6 43 79.1
BolC8t48629H Brassica oleracea HOM05D000481 ORTHO05D003804 2.7e-13 78.6 43 79.1
BraA08t34054Z Brassica rapa HOM05D000481 ORTHO05D003804 2.7e-13 78.6 43 79.1
Carub.0007s1528 Capsella rubella HOM05D000481 ORTHO05D003804 2.7e-13 78.6 43 79.1
Carub.0007s1531 Capsella rubella HOM05D000481 ORTHO05D003804 2.7e-13 78.6 43 79.1
AUR62021128 Chenopodium quinoa HOM05D000481 ORTHO05D003804 2.7e-13 78.6 43 79.1
Glyma.09G132800 Glycine max HOM05D000481 ORTHO05D003804 2.7e-13 78.6 43 81.4
Potri.017G143132 Populus trichocarpa HOM05D000481 ORTHO05D003804 2.7e-13 78.6 43 88.4
TWI39G0643 Tripterygium wilfordii HOM05D000481 ORTHO05D003804 2.7e-13 78.6 43 83.7
Carub.0238s0001 Capsella rubella HOM05D008661 ORTHO05D010872 3.5e-13 78.2 93 45.2
ECA233G0680 Erigeron canadensis HOM05D000481 ORTHO05D003804 3.5e-13 78.2 42 83.3
Gohir.A08G098300 Gossypium hirsutum HOM05D000481 ORTHO05D003804 3.5e-13 78.2 43 83.7
Gorai.004G117500 Gossypium raimondii HOM05D000481 ORTHO05D003804 3.5e-13 78.2 43 83.7
Os10g0533900 Oryza sativa ssp. japonica HOM05D000481 ORTHO05D003804 3.5e-13 78.2 43 86.0
TAR629G2084 Trochodendron aralioides HOM05D000481 ORTHO05D003804 3.5e-13 78.2 43 86.0
Zm00001eb021890 Zea mays HOM05D000481 ORTHO05D003804 3.5e-13 78.2 43 86.0
Lj2g0019584 Lotus japonicus HOM05D000481 ORTHO05D003804 4.5e-13 77.8 43 81.4
MD07G1247300 Malus domestica HOM05D000481 ORTHO05D003804 4.5e-13 77.8 43 81.4
Sabra17G0120000 Salix brachista HOM05D000041 ORTHO05D003804 4.5e-13 77.8 43 83.7
Lsat_1_v5_gn_8_6621 Lactuca sativa HOM05D000481 ORTHO05D003804 5.9e-13 77.4 43 81.4
Gohir.D08G109900 Gossypium hirsutum HOM05D000481 ORTHO05D003804 7.7e-13 77.0 43 81.4
A01p16940 Brassica napus HOM05D000481 ORTHO05D003804 1.0e-12 76.6 43 79.1
BraA01t01647Z Brassica rapa HOM05D000481 ORTHO05D003804 1.0e-12 76.6 43 79.1
Ciclev10005686m.g Citrus clementina HOM05D000481 ORTHO05D003804 1.0e-12 76.6 45 80.0
DCAR_009392 Daucus carota HOM05D000481 ORTHO05D003804 1.0e-12 76.6 43 83.7
TAR375G0573 Trochodendron aralioides HOM05D000481 ORTHO05D003804 1.0e-12 76.6 44 81.8
Aa31LG3G8910 Aethionema arabicum HOM05D000481 ORTHO05D003804 1.3e-12 76.3 43 76.7
Thhalv10026034m.g Eutrema salsugineum HOM05D000481 ORTHO05D003804 1.3e-12 76.3 43 76.7
MBI04_g39573_MAGBIO Magnolia biondii HOM05D000481 ORTHO05D003804 1.3e-12 76.3 43 83.7
SEGI_00852 Sequoiadendron giganteum HOM05D000481 ORTHO05D003804 1.3e-12 76.3 43 79.1
Manes.02G146550 Manihot esculenta HOM05D000481 ORTHO05D003804 1.7e-12 75.9 43 79.1
PSO478G0030 Papaver somniferum HOM05D000034 ORTHO05D000285 1.7e-12 75.9 44 81.8
PGR142G2800 Punica granatum HOM05D000481 ORTHO05D003804 1.7e-12 75.9 43 79.1
Actinidia03136 Actinidia chinensis HOM05D000481 ORTHO05D003804 2.3e-12 75.5 43 83.7
Sc13g0009140 Simmondsia chinensis HOM05D000481 ORTHO05D003804 2.3e-12 75.5 43 81.4
HPP92_025632 Vanilla planifolia HOM05D004707 ORTHO05D005837 2.3e-12 75.5 43 79.1
Actinidia31837 Actinidia chinensis HOM05D000481 ORTHO05D003804 2.9e-12 75.1 43 81.4
CARHR233080 Cardamine hirsuta HOM05D008661 ORTHO05D010872 3.8e-12 74.7 43 74.4
HPP92_008925 Vanilla planifolia HOM05D000481 ORTHO05D003804 1.5e-11 72.8 43 76.7
CBR_g47937 Chara braunii HOM05D000481 ORTHO05D003804 6.1e-10 67.4 43 67.4
Psat6g196400 Pisum sativum HOM05D000481 ORTHO05D003804 6.1e-10 67.4 43 74.4
Ca_10729_v3 Cicer arietinum L. HOM05D000481 ORTHO05D003804 1.8e-09 65.9 43 74.4
Mapoly0015s0018 Marchantia polymorpha HOM05D000481 ORTHO05D003804 1.8e-09 65.9 43 67.4
Medtr1g100100 Medicago truncatula HOM05D000481 ORTHO05D003804 1.8e-09 65.9 43 72.1
SMO119G0290 Selaginella moellendorffii HOM05D000481 ORTHO05D003804 4.0e-09 64.7 42 71.4
TPR.G7750 Trifolium pratense HOM05D000481 ORTHO05D003804 8.9e-09 63.5 43 72.1
Pp3c8_5480 Physcomitrium patens HOM05D000481 ORTHO05D003804 1.5e-08 62.8 43 65.1
Pp3c3_31040 Physcomitrium patens HOM05D000481 ORTHO05D003804 4.4e-08 61.2 42 64.3
ECA238G0271 Erigeron canadensis HOM05D000041 ORTHO05D000061 7.5e-08 60.5 32 87.5
Lj1A1004G78 Lonicera japonica HOM05D000481 ORTHO05D003804 9.8e-08 60.1 32 87.5
Aa31LG7G12070 Aethionema arabicum HOM05D000481 ORTHO05D003804 1.4e-06 56.2 76 38.2
Peaxi162Scf00036g00062 Petunia axillaris HOM05D000481 ORTHO05D003804 1.8e-06 55.8 45 57.8
Zm00001eb379290 Zea mays HOM05D000481 ORTHO05D003804 2.4e-06 55.5 43 58.1
CAN.G809.23 Capsicum annuum HOM05D000481 ORTHO05D003804 4.1e-06 54.7 70 45.7
Os06g0107000 Oryza sativa ssp. japonica HOM05D000481 ORTHO05D003804 4.1e-06 54.7 46 56.5
CAN.G809.26 Capsicum annuum HOM05D000481 ORTHO05D003804 5.4e-06 54.3 45 57.8


User provided reference genes

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