Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 0.0e+00 1614.7 895 100.0
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 0.0e+00 1132.5 896 71.7
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 1.8e-301 1039.3 891 71.5
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 8.0e-246 854.4 915 56.4
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 3.7e-243 845.5 916 56.4
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 4.6e-233 812.0 915 54.3
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 2.5e-231 806.2 932 54.7
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 1.7e-227 793.5 920 52.8
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 5.3e-221 771.9 919 54.5
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 6.9e-221 771.5 930 54.1
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 9.9e-220 767.7 908 53.2
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 2.1e-217 760.0 930 53.0
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 1.5e-215 753.8 934 51.2
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 9.6e-215 751.1 936 50.6
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 4.8e-214 748.8 936 50.5
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 2.4e-213 746.5 941 51.1
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 1.5e-212 743.8 942 50.8
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 9.3e-210 734.6 929 52.3
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 1.2e-209 734.2 929 50.8
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 1.6e-209 733.8 929 50.8
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 4.6e-209 732.3 926 52.1
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 4.6e-209 732.3 930 50.5
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 3.3e-207 726.1 845 55.7
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 1.4e-205 720.7 929 50.9
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 1.1e-202 711.1 929 52.3
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 2.5e-202 709.9 931 49.5
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 4.2e-202 709.1 930 49.1
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 7.9e-201 704.9 928 50.0
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 2.3e-200 703.4 922 50.2
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 8.7e-200 701.4 930 50.8
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 1.1e-199 701.0 929 50.5
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 1.9e-199 700.3 932 50.5
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 8.2e-198 694.9 935 49.3
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 2.4e-197 693.3 927 48.1
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.5e-196 690.6 927 47.8
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 5.8e-196 688.7 934 50.4
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 3.8e-195 686.0 927 49.3
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 8.4e-195 684.9 927 49.3
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 1.9e-194 683.7 911 50.7
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.9e-194 683.7 934 50.4
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 3.2e-194 682.9 928 48.4
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 3.2e-194 682.9 934 49.7
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 1.6e-193 680.6 905 52.4
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 1.9e-191 673.7 927 48.9
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 4.3e-191 672.5 931 48.4
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 7.4e-191 671.8 927 52.2
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.1e-189 667.9 932 48.4
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 6.9e-189 665.2 927 49.7
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 2.0e-188 663.7 928 49.6
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 4.5e-188 662.5 929 48.5
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 1.0e-187 661.4 905 51.9
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 6.5e-187 658.7 927 50.8
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 1.4e-186 657.5 925 52.9
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 2.5e-186 656.8 908 50.2
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 2.5e-186 656.8 926 48.3
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 2.5e-186 656.8 931 48.5
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 2.5e-186 656.8 932 48.2
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 2.5e-186 656.8 905 51.8
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 4.2e-186 656.0 925 48.2
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 7.2e-186 655.2 926 47.5
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 4.6e-185 652.5 934 47.6
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 7.9e-185 651.7 928 51.3
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.0e-184 651.4 929 51.2
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 3.0e-184 649.8 929 45.7
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 3.3e-183 646.4 928 51.7
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 3.1e-181 639.8 929 46.0
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 2.6e-180 636.7 929 52.1
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.0e-179 634.8 923 52.1
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 2.2e-179 633.6 943 45.6
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 3.8e-179 632.9 943 47.6
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 1.6e-177 627.5 931 46.9
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 2.1e-177 627.1 943 47.5
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 1.5e-175 620.9 945 46.1
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 3.7e-174 616.3 933 48.3
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 1.8e-173 614.0 860 48.7
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 2.2e-171 607.1 929 48.1
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 2.9e-171 606.7 933 47.5
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 6.5e-171 605.5 919 47.6
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 6.5e-171 605.5 927 46.9
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 1.1e-170 604.7 908 46.9
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.5e-170 604.4 926 46.2
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 1.8e-168 597.4 859 47.5
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 3.0e-168 596.7 859 47.5
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 1.5e-167 594.3 914 42.9
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 1.5e-167 594.3 926 46.4
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 7.4e-167 592.0 921 45.3
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 9.7e-167 591.7 929 47.1
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 2.2e-166 590.5 925 46.2
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 2.8e-166 590.1 924 47.3
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 7.0e-165 585.5 929 45.4
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 2.6e-164 583.6 919 47.3
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 5.9e-164 582.4 932 45.4
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 7.7e-164 582.0 932 45.3
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 1.0e-163 581.6 948 46.1
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 1.7e-163 580.9 931 47.2
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 2.2e-163 580.5 928 45.5
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 3.8e-163 579.7 948 46.0
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 1.9e-162 577.4 936 45.8
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 1.9e-162 577.4 931 46.3
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 1.6e-161 574.3 935 47.3
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 1.4e-160 571.2 924 45.9
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 1.2e-159 568.2 916 46.7
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 1.3e-158 564.7 935 46.1
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 1.3e-158 564.7 928 46.1
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 2.8e-158 563.5 939 46.2
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 1.8e-157 560.8 931 46.5
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 2.7e-156 557.0 933 46.3
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 1.8e-152 544.3 843 48.8
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 1.3e-150 538.1 936 41.2
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 8.3e-150 535.4 935 44.9
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 2.5e-146 523.9 919 43.0
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 5.5e-146 522.7 891 45.7
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 2.8e-145 520.4 920 43.0
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 8.9e-144 515.4 922 41.4
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 3.4e-143 513.5 924 42.4
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 4.4e-143 513.1 916 42.9
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 6.3e-142 509.2 931 42.9
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 1.8e-141 507.7 921 40.5
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 6.2e-137 492.7 919 42.1
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 2.3e-136 490.7 900 43.8
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 4.0e-136 490.0 912 42.7
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 4.4e-135 486.5 342 73.7
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 2.2e-134 484.2 920 42.3
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 2.2e-134 484.2 912 42.2
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 3.7e-134 483.4 906 40.7
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 6.4e-134 482.6 920 42.6
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 1.9e-133 481.1 921 42.6
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 5.4e-133 479.6 920 42.3
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 2.7e-132 477.2 896 43.2
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 3.5e-132 476.9 919 42.8
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 6.0e-132 476.1 926 40.3
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 4.3e-130 469.9 786 45.2
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.6e-129 468.0 903 40.2
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 1.4e-128 464.9 904 41.6
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 7.5e-127 459.1 915 41.6
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 2.7e-124 450.7 907 42.1
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 4.6e-124 449.9 820 39.5
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 7.8e-124 449.1 874 42.2
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 8.6e-123 445.7 904 40.0
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 1.1e-122 445.3 912 41.7
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 2.5e-122 444.1 905 41.3
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 4.3e-122 443.4 905 41.1
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 4.3e-122 443.4 817 43.2
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 6.8e-120 436.0 810 39.6
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 2.9e-118 430.6 755 43.3
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 5.4e-117 426.4 452 57.1
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 3.0e-115 420.6 918 40.5
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 2.6e-103 380.9 790 41.9
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 3.0e-99 367.5 822 42.7
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 6.2e-97 359.8 863 37.9
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 6.9e-96 356.3 860 35.7
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 9.9e-95 352.4 449 53.7
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 1.4e-93 348.6 918 35.9
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.3e-89 335.5 271 65.3
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 3.8e-86 323.9 779 38.8
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 3.9e-83 313.9 801 38.0
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 1.6e-81 308.5 825 36.6
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 4.1e-80 303.9 802 37.2
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 9.0e-80 302.8 794 37.0
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 4.5e-79 300.4 833 35.5
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 3.2e-77 294.3 801 37.6
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 1.2e-71 275.8 817 36.7
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 1.2e-71 275.8 817 36.7
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 7.2e-69 266.5 871 33.5
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 4.3e-66 257.3 538 35.3
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 2.8e-65 254.6 843 35.5
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.8e-64 251.9 867 36.0
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 5.9e-63 246.9 351 45.0
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 2.2e-57 228.4 366 41.8
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 9.1e-56 223.0 296 45.6
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.9e-53 215.3 297 45.5
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 3.3e-50 204.5 399 43.6
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 4.8e-49 200.7 328 42.1
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 6.1e-44 183.7 217 49.3
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.0e-43 183.0 144 61.1
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 9.8e-42 176.4 269 42.0
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 3.7e-41 174.5 97 91.8
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.0e-38 166.4 168 58.3
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 4.0e-35 154.5 275 38.9
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.0e-30 139.8 274 38.0
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 8.9e-27 126.7 299 33.8
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 5.4e-24 117.5 243 47.7
ATR0681G103 Amborella trichopoda HOM05D003671 ORTHO05D004285 4.0e-11 74.7 145 39.3


User provided reference genes

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