Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 5.1e-88 327.8 173 100.0
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 1.5e-76 289.7 173 86.7
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 2.4e-74 282.3 173 86.1
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 1.2e-73 280.0 178 84.3
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 3.5e-73 278.5 173 80.9
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 6.0e-73 277.7 173 83.8
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 1.0e-72 276.9 173 82.1
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 4.3e-71 271.6 173 79.8
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 7.3e-71 270.8 174 81.0
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 1.6e-70 269.6 173 79.8
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 2.1e-70 269.2 173 79.2
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 2.1e-70 269.2 173 79.2
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 2.1e-70 269.2 173 79.2
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 3.6e-70 268.5 173 81.5
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 8.1e-70 267.3 173 79.2
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 1.1e-69 266.9 173 80.9
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 1.8e-69 266.2 173 80.9
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 3.1e-69 265.4 174 78.2
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 3.1e-69 265.4 173 79.2
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 4.0e-69 265.0 168 81.0
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 2.0e-68 262.7 173 76.9
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 4.5e-68 261.5 174 79.3
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 4.5e-68 261.5 175 81.1
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 4.5e-68 261.5 173 78.0
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 4.5e-68 261.5 173 79.8
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 7.6e-68 260.8 175 80.0
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 1.3e-67 260.0 175 78.3
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 1.3e-67 260.0 174 78.2
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 1.7e-67 259.6 173 76.9
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 2.2e-67 259.2 165 81.2
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 3.8e-67 258.5 173 78.6
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 3.8e-67 258.5 173 76.9
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 3.8e-67 258.5 168 80.4
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 4.9e-67 258.1 174 78.2
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 6.4e-67 257.7 173 76.3
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 2.4e-66 255.8 175 78.9
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 2.4e-66 255.8 175 80.0
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 7.1e-66 254.2 173 78.6
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 7.1e-66 254.2 174 76.4
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 7.1e-66 254.2 172 76.7
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 1.2e-65 253.4 176 79.0
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 1.2e-65 253.4 175 78.3
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 1.6e-65 253.1 175 77.7
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 1.6e-65 253.1 174 76.4
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 2.1e-65 252.7 174 75.9
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 1.3e-64 250.0 173 76.9
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 5.1e-64 248.1 176 77.3
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 6.7e-64 247.7 174 76.4
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 8.7e-64 247.3 175 76.0
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 8.7e-64 247.3 174 76.4
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 8.7e-64 247.3 174 76.4
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 1.5e-63 246.5 174 74.7
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.9e-63 246.1 174 76.4
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 2.5e-63 245.7 174 75.9
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 2.5e-63 245.7 174 74.1
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 2.5e-63 245.7 173 72.8
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 4.3e-63 245.0 175 76.0
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 7.4e-63 244.2 175 76.6
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 1.3e-62 243.4 165 78.8
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 2.1e-62 242.7 173 74.6
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 6.2e-62 241.1 175 75.4
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 8.1e-62 240.7 185 71.4
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 2.6e-60 235.7 176 72.2
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 7.6e-60 234.2 177 72.3
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 1.0e-59 233.8 173 72.3
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 1.3e-59 233.4 153 80.4
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.7e-59 233.0 174 72.4
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 1.4e-58 229.9 174 73.0
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 9.3e-58 227.3 175 72.0
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 7.9e-57 224.2 175 70.9
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 7.9e-57 224.2 175 70.9
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 7.9e-57 224.2 175 70.9
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 7.9e-57 224.2 151 82.1
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 1.0e-56 223.8 176 68.8
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 1.0e-56 223.8 175 70.9
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 1.3e-56 223.4 175 70.3
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 1.3e-56 223.4 175 69.7
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 1.8e-56 223.0 175 70.3
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 5.1e-56 221.5 175 69.7
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 6.7e-56 221.1 175 70.3
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 1.1e-55 220.3 151 82.1
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 1.5e-55 219.9 175 69.1
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 1.5e-55 219.9 175 69.1
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 1.5e-55 219.9 175 69.1
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 1.9e-55 219.5 175 69.1
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 2.5e-55 219.2 176 69.3
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 4.8e-54 214.9 174 67.8
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 1.1e-53 213.8 169 69.8
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 3.1e-53 212.2 153 76.5
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 6.9e-53 211.1 138 76.1
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 1.7e-51 206.5 173 64.7
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 2.2e-51 206.1 140 73.6
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 1.0e-48 197.2 173 61.8
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 1.8e-48 196.4 178 59.0
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 1.5e-47 193.4 167 63.5
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 7.4e-47 191.0 159 67.3
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 6.3e-46 188.0 138 80.4
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 3.8e-43 178.7 173 59.5
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 7.2e-42 174.5 144 73.6
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 1.6e-41 173.3 137 72.3
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 2.7e-41 172.6 137 71.5
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 2.7e-41 172.6 117 79.5
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 1.8e-40 169.9 183 55.7
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 5.1e-40 168.3 175 59.4
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 1.1e-34 150.6 114 73.7
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 3.2e-34 149.1 155 60.0
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 9.1e-29 131.0 106 70.8
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 2.0e-28 129.8 108 70.4
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 1.3e-27 127.1 112 68.8
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 1.5e-26 123.6 173 42.2
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 3.2e-26 122.5 69 100.0
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 1.3e-22 110.5 106 66.0
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 2.2e-22 109.8 106 66.0
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 3.1e-21 105.9 165 43.0
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 3.0e-16 89.4 90 63.3
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 5.2e-16 88.6 77 62.3
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 4.4e-15 85.5 107 55.1
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 2.8e-14 82.8 68 67.6
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 3.1e-13 79.3 97 53.6
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 4.5e-12 75.5 61 68.9
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 1.3e-11 73.9 61 67.2
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 1.3e-11 73.9 61 67.2
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 2.2e-11 73.2 61 67.2
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 2.2e-11 73.2 111 48.6
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 5.0e-11 72.0 61 65.6
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 6.5e-11 71.6 89 56.2
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 1.1e-10 70.9 62 67.7
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 7.2e-10 68.2 61 65.6
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 1.6e-09 67.0 66 63.6
Sabra19G0131600 Salix brachista HOM05D005631 ORTHO05D006765 6.1e-09 65.1 95 47.4
Sabra08G0141900 Salix brachista HOM05D000225 ORTHO05D002520 1.0e-08 64.3 71 57.7
Sabra04G0079400 Salix brachista HOM05D005631 ORTHO05D006765 1.2e-07 60.8 80 51.2
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 2.0e-07 60.1 44 72.7
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 7.5e-07 58.2 44 70.5
Sabra15G0067400 Salix brachista HOM05D003748 ORTHO05D004108 7.5e-07 58.2 82 50.0
CBR_g4734 Chara braunii HOM05D005631 ORTHO05D006765 9.8e-07 57.8 102 45.1
C04p57300 Brassica napus HOM05D005631 ORTHO05D006765 2.8e-06 56.2 44 68.2
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 3.7e-06 55.8 40 80.0


User provided reference genes

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