Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 1.1e-108 396.7 205 100.0
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 1.1e-52 210.7 136 77.2
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 1.2e-51 207.2 132 78.0
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 6.5e-50 201.4 126 80.2
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 1.9e-49 199.9 129 78.3
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 2.5e-49 199.5 131 77.1
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 2.1e-48 196.4 138 74.6
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 2.7e-48 196.1 134 76.1
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 1.0e-47 194.1 129 75.2
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 1.0e-47 194.1 129 75.2
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 1.0e-47 194.1 158 65.8
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 1.4e-47 193.7 140 70.0
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 3.9e-47 192.2 134 73.1
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 6.7e-47 191.4 134 73.1
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 6.7e-47 191.4 154 66.9
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 1.1e-46 190.7 130 75.4
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 1.5e-46 190.3 126 75.4
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 1.5e-46 190.3 135 72.6
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 3.3e-46 189.1 128 74.2
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 5.7e-46 188.3 125 76.8
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 5.7e-46 188.3 134 70.9
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 5.7e-46 188.3 134 70.9
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 5.7e-46 188.3 129 72.9
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 9.7e-46 187.6 129 72.1
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 9.7e-46 187.6 128 72.7
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 1.3e-45 187.2 129 73.6
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 1.3e-45 187.2 129 72.9
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 2.8e-45 186.0 129 72.1
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 3.7e-45 185.7 139 67.6
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 3.7e-45 185.7 140 67.1
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 4.8e-45 185.3 129 71.3
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 6.3e-45 184.9 134 69.4
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 8.2e-45 184.5 149 64.4
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 8.2e-45 184.5 129 69.8
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 1.1e-44 184.1 129 72.1
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 1.1e-44 184.1 126 72.2
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 1.4e-44 183.7 136 68.4
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 1.4e-44 183.7 140 67.9
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 1.4e-44 183.7 129 72.1
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 3.1e-44 182.6 129 70.5
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 9.1e-44 181.0 135 68.9
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 1.2e-43 180.6 133 69.2
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 1.2e-43 180.6 135 69.6
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 1.5e-43 180.3 129 70.5
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.5e-43 180.3 129 70.5
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 1.5e-43 180.3 134 70.1
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 2.0e-43 179.9 132 69.7
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 2.0e-43 179.9 129 69.8
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.6e-43 179.5 129 69.8
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 3.4e-43 179.1 125 72.0
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 3.4e-43 179.1 131 66.4
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 4.5e-43 178.7 129 69.8
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 5.9e-43 178.3 138 65.2
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 1.3e-42 177.2 136 65.4
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 2.2e-42 176.4 135 65.9
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 2.9e-42 176.0 140 62.9
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 3.8e-42 175.6 126 70.6
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 3.8e-42 175.6 129 67.4
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 5.0e-42 175.3 134 67.9
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 5.0e-42 175.3 129 69.0
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 5.0e-42 175.3 129 69.0
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 6.5e-42 174.9 128 67.2
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 1.1e-41 174.1 134 66.4
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 1.1e-41 174.1 134 65.7
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 1.4e-41 173.7 129 66.7
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 1.4e-41 173.7 132 66.7
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 1.4e-41 173.7 138 64.5
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 1.9e-41 173.3 129 66.7
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 2.5e-41 172.9 132 66.7
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 2.5e-41 172.9 129 65.9
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 2.5e-41 172.9 132 65.9
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 3.2e-41 172.6 129 67.4
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 3.2e-41 172.6 159 58.5
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 4.2e-41 172.2 124 71.0
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 4.2e-41 172.2 128 66.4
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 4.2e-41 172.2 124 71.8
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 5.5e-41 171.8 129 65.9
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 5.5e-41 171.8 139 64.7
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 9.4e-41 171.0 135 65.9
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 9.4e-41 171.0 129 66.7
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 9.4e-41 171.0 126 67.5
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 1.2e-40 170.6 125 67.2
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 1.2e-40 170.6 138 65.2
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.2e-40 170.6 129 68.2
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 1.2e-40 170.6 129 66.7
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 1.6e-40 170.2 126 68.3
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 1.6e-40 170.2 128 66.4
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 2.7e-40 169.5 121 71.1
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 2.7e-40 169.5 136 64.7
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 3.6e-40 169.1 132 66.7
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 3.6e-40 169.1 138 61.6
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 3.6e-40 169.1 159 57.9
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 4.7e-40 168.7 135 63.7
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 2.3e-39 166.4 129 68.2
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 3.9e-39 165.6 126 65.9
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 3.9e-39 165.6 150 62.0
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 5.2e-39 165.2 125 65.6
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 5.2e-39 165.2 127 66.9
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 7.4e-38 161.4 123 65.9
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 2.5e-33 146.4 110 65.5
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 2.5e-33 146.4 110 65.5
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 1.2e-32 144.1 123 58.5
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 2.7e-32 142.9 110 64.5
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 8.0e-32 141.4 125 61.6
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 3.0e-31 139.4 105 65.7
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 1.2e-30 137.5 128 60.2
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 1.2e-24 117.5 149 47.7
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 8.0e-24 114.8 73 76.7
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 2.0e-22 110.2 135 45.2
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 6.3e-21 105.1 134 47.0
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 7.0e-20 101.7 148 41.9
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 2.5e-17 93.2 69 63.8
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 3.4e-14 82.8 60 63.3
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 5.7e-14 82.0 66 60.6
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 9.2e-12 74.7 50 80.0
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 1.2e-11 74.3 133 37.6
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 1.7e-10 70.5 75 52.0
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 6.6e-10 68.6 46 67.4
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 2.5e-09 66.6 80 46.2


User provided reference genes

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