Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057598.1 Olea europaea HOM05D000083 ORTHO05D003582 1.6e-138 496.1 252 100.0
Oeu023128.1 Olea europaea HOM05D000083 ORTHO05D003582 3.9e-105 385.2 233 87.1
Oeu007541.1 Olea europaea HOM05D000083 ORTHO05D003582 3.1e-102 375.6 225 86.7
Oeu023129.1 Olea europaea HOM05D000083 ORTHO05D003582 1.1e-80 303.9 188 87.2
Migut.E00701 Erythranthe guttata HOM05D000083 ORTHO05D003582 5.1e-73 278.5 237 66.2
MSTRG.2058 Avicennia marina HOM05D000083 ORTHO05D003582 2.2e-68 263.1 225 65.8
SalBow6G1016 Salvia bowleyana HOM05D000083 ORTHO05D003582 3.8e-68 262.3 218 67.4
Lj3C850G18 Lonicera japonica HOM05D000083 ORTHO05D003582 6.7e-65 251.5 225 62.2
Cc00_g03930 Coffea canephora HOM05D000083 ORTHO05D003582 1.1e-64 250.8 237 60.3
DCAR_030398 Daucus carota HOM05D000083 ORTHO05D003582 1.5e-64 250.4 227 63.0
Oeu033540.1 Olea europaea HOM05D000083 ORTHO05D003582 1.3e-63 247.3 237 60.3
HanXRQChr17g0540841 Helianthus annuus HOM05D000083 ORTHO05D003582 2.8e-63 246.1 225 62.2
vmacro10904 Vaccinium macrocarpon HOM05D000083 ORTHO05D003582 3.7e-63 245.7 225 60.4
Dinv11712 Davidia involucrata HOM05D000083 ORTHO05D003582 4.8e-63 245.4 225 61.8
HanXRQChr06g0172001 Helianthus annuus HOM05D000083 ORTHO05D003582 1.1e-62 244.2 225 61.3
MD16G1000900 Malus domestica HOM05D000083 ORTHO05D003582 1.4e-62 243.8 238 58.8
Rhsim09G0073200 Rhododendron simsii HOM05D000083 ORTHO05D003582 1.4e-62 243.8 225 60.0
Prupe.1G346000 Prunus persica HOM05D000083 ORTHO05D003582 3.1e-62 242.7 238 59.2
RcHm_v2.0_Chr4g0446521 Rosa chinensis HOM05D000083 ORTHO05D003582 5.3e-62 241.9 238 58.0
MD13G1006900 Malus domestica HOM05D000083 ORTHO05D003582 7.0e-62 241.5 238 58.8
SGA_v2.0_scaffold99G29461 Striga asiatica HOM05D000083 ORTHO05D003582 9.1e-62 241.1 266 56.0
AUR62017682 Chenopodium quinoa HOM05D000083 ORTHO05D003582 2.6e-61 239.6 225 61.3
AUR62015218 Chenopodium quinoa HOM05D000083 ORTHO05D003582 3.5e-61 239.2 225 61.3
FAN07G1039 Fragaria x ananassa HOM05D000083 ORTHO05D003582 3.5e-61 239.2 238 58.4
Manes.11G101900 Manihot esculenta HOM05D000083 ORTHO05D003582 1.0e-60 237.7 238 58.4
Nn7g37822 Nelumbo nucifera HOM05D000083 ORTHO05D003582 1.3e-60 237.3 238 58.8
Oeu027907.6 Olea europaea HOM05D000083 ORTHO05D003582 1.7e-60 236.9 237 59.9
GSVIVG01012031001 Vitis vinifera HOM05D000083 ORTHO05D003582 2.2e-60 236.5 227 59.5
Ciclev10030510m.g Citrus clementina HOM05D000083 ORTHO05D003582 2.9e-60 236.1 226 61.1
CARHR088200 Cardamine hirsuta HOM05D000083 ORTHO05D003582 6.5e-60 235.0 237 56.5
Sc06g0007920 Simmondsia chinensis HOM05D000083 ORTHO05D003582 6.5e-60 235.0 228 58.3
THA.LOC104822679 Tarenaya hassleriana HOM05D000083 ORTHO05D003582 8.5e-60 234.6 238 57.6
TAR371G0617 Trochodendron aralioides HOM05D000083 ORTHO05D003582 1.1e-59 234.2 240 58.3
FvH4_4g36790 Fragaria vesca HOM05D000083 ORTHO05D003582 3.2e-59 232.6 238 58.0
FAN17G2779 Fragaria x ananassa HOM05D000083 ORTHO05D003582 3.2e-59 232.6 247 56.7
Carub.0003s1301 Capsella rubella HOM05D000083 ORTHO05D003582 4.2e-59 232.3 237 56.5
Gohir.A03G164300 Gossypium hirsutum HOM05D000083 ORTHO05D003582 4.2e-59 232.3 226 59.7
Phvul.011G030800 Phaseolus vulgaris HOM05D000083 ORTHO05D003582 4.2e-59 232.3 233 57.9
BcaB04g18769 Brassica carinata HOM05D000083 ORTHO05D003582 7.2e-59 231.5 236 57.2
Lj3g0012190 Lotus japonicus HOM05D000083 ORTHO05D003582 7.2e-59 231.5 231 58.0
Duzib132G0002 Durio zibethinus HOM05D000083 ORTHO05D003582 9.4e-59 231.1 219 61.2
Thhalv10019926m.g Eutrema salsugineum HOM05D000083 ORTHO05D003582 9.4e-59 231.1 237 56.5
TAR629G3380 Trochodendron aralioides HOM05D000083 ORTHO05D003582 1.2e-58 230.7 226 59.3
Aqoxy7G03614 Aquilegia oxysepala HOM05D000083 ORTHO05D003582 1.6e-58 230.3 238 57.1
Glyma.12G027600 Glycine max HOM05D000083 ORTHO05D003582 1.6e-58 230.3 231 58.0
Glyma.11G101700 Glycine max HOM05D000083 ORTHO05D003582 2.1e-58 229.9 231 57.6
Thecc.02G160900 Theobroma cacao HOM05D000083 ORTHO05D003582 2.1e-58 229.9 213 61.5
VMungo1383G1323 Vigna mungo HOM05D000083 ORTHO05D003582 2.1e-58 229.9 231 57.1
AL3G25440 Arabidopsis lyrata HOM05D000083 ORTHO05D003582 2.7e-58 229.6 225 57.8
TWI53G2094 Tripterygium wilfordii HOM05D000083 ORTHO05D003582 2.7e-58 229.6 219 58.9
CANSAT64G2172 Cannabis sativa HOM05D000083 ORTHO05D003582 4.7e-58 228.8 225 59.6
Gohir.D02G187600 Gossypium hirsutum HOM05D000083 ORTHO05D003582 4.7e-58 228.8 226 58.8
Psat7g176440 Pisum sativum HOM05D000083 ORTHO05D003582 4.7e-58 228.8 231 57.1
QL03p043964 Quercus lobata HOM05D000083 ORTHO05D003582 4.7e-58 228.8 238 56.7
Gorai.005G210100 Gossypium raimondii HOM05D000083 ORTHO05D003582 6.1e-58 228.4 226 58.8
AT3G13530 Arabidopsis thaliana HOM05D000083 ORTHO05D003582 1.0e-57 227.6 225 57.3
CiPaw.04G139600 Carya illinoinensis HOM05D000083 ORTHO05D003582 1.4e-57 227.3 231 58.0
BolC3t16908H Brassica oleracea HOM05D000083 ORTHO05D003582 2.3e-57 226.5 224 57.1
DCAR_023443 Daucus carota HOM05D000083 ORTHO05D003582 2.3e-57 226.5 225 54.7
THA.LOC104810328 Tarenaya hassleriana HOM05D000083 ORTHO05D003582 2.3e-57 226.5 238 55.9
Ca_19030_v3 Cicer arietinum L. HOM05D000083 ORTHO05D003582 3.0e-57 226.1 231 56.3
Aa31LG8G730 Aethionema arabicum HOM05D000083 ORTHO05D003582 5.2e-57 225.3 224 57.6
Gohir.D01G014300 Gossypium hirsutum HOM05D000083 ORTHO05D003582 5.2e-57 225.3 217 59.0
PSO063G5474 Papaver somniferum HOM05D000083 ORTHO05D003582 5.2e-57 225.3 228 59.2
PSO782G1916 Papaver somniferum HOM05D000083 ORTHO05D003582 5.2e-57 225.3 228 59.2
Peaxi162Scf01172g00034 Petunia axillaris HOM05D000083 ORTHO05D003582 5.2e-57 225.3 242 54.5
TPR.G32329 Trifolium pratense HOM05D000083 ORTHO05D003582 5.2e-57 225.3 231 56.3
TWI74G1512 Tripterygium wilfordii HOM05D000083 ORTHO05D003582 5.2e-57 225.3 226 58.4
FAN12G3263 Fragaria x ananassa HOM05D000083 ORTHO05D003582 6.7e-57 224.9 247 55.9
Medtr4g074875 Medicago truncatula HOM05D000083 ORTHO05D003582 6.7e-57 224.9 219 58.0
C03p46440 Brassica napus HOM05D000083 ORTHO05D003582 8.8e-57 224.6 224 56.7
Gohir.A01G013000 Gossypium hirsutum HOM05D000083 ORTHO05D003582 8.8e-57 224.6 217 58.5
CAN.G624.28 Capsicum annuum HOM05D000083 ORTHO05D003582 1.1e-56 224.2 237 56.1
Haze_11721 Corylus avellana HOM05D000083 ORTHO05D003582 1.1e-56 224.2 256 52.3
Peaxi162Scf00363g00731 Petunia axillaris HOM05D000083 ORTHO05D003582 1.1e-56 224.2 229 55.0
Thhalv10019902m.g Eutrema salsugineum HOM05D000083 ORTHO05D003582 1.5e-56 223.8 224 56.7
PGSC0003DMG400007647 Solanum tuberosum HOM05D000083 ORTHO05D003582 2.0e-56 223.4 237 55.7
Duzib248G1611 Durio zibethinus HOM05D000083 ORTHO05D003582 2.6e-56 223.0 219 59.8
Gohir.D12G137900 Gossypium hirsutum HOM05D000083 ORTHO05D003582 2.6e-56 223.0 231 56.7
Medtr4g075410 Medicago truncatula HOM05D000083 ORTHO05D003582 3.3e-56 222.6 237 54.0
Potri.005G094200 Populus trichocarpa HOM05D000083 ORTHO05D003582 3.3e-56 222.6 212 59.9
Aa31LG10G1090 Aethionema arabicum HOM05D000083 ORTHO05D003582 5.7e-56 221.9 237 55.3
Solyc11g033270.2 Solanum lycopersicum HOM05D000083 ORTHO05D003582 5.7e-56 221.9 237 55.7
CsaV3_3G031470 Cucumis sativus L. HOM05D000083 ORTHO05D003582 7.4e-56 221.5 213 60.1
Gorai.002G016000 Gossypium raimondii HOM05D000083 ORTHO05D003582 7.4e-56 221.5 217 58.5
Ah.01g012890 Amaranthus hybridus HOM05D000083 ORTHO05D003582 9.7e-56 221.1 212 58.5
MELO3C024030.2 Cucumis melo HOM05D000083 ORTHO05D003582 9.7e-56 221.1 213 60.1
Eucgr.J00858 Eucalyptus grandis HOM05D000083 ORTHO05D003582 9.7e-56 221.1 226 58.4
Sp3g06890 Schrenkiella parvula HOM05D000083 ORTHO05D003582 1.3e-55 220.7 237 54.0
Sed0020503 Sechium edule HOM05D000083 ORTHO05D003582 1.3e-55 220.7 213 59.2
AT3G07980 Arabidopsis thaliana HOM05D000083 ORTHO05D003582 1.7e-55 220.3 225 55.6
Gohir.A12G134300 Gossypium hirsutum HOM05D000083 ORTHO05D003582 1.7e-55 220.3 233 56.2
Sabra05G0078000 Salix brachista HOM05D000083 ORTHO05D003582 1.7e-55 220.3 212 59.9
Sopen11g015750 Solanum pennellii HOM05D000083 ORTHO05D003582 2.8e-55 219.5 237 55.3
Gorai.008G149400 Gossypium raimondii HOM05D000083 ORTHO05D003582 3.7e-55 219.2 231 55.8
Carub.0003s0756 Capsella rubella HOM05D000083 ORTHO05D003582 4.8e-55 218.8 225 56.4
ECA246G2960 Erigeron canadensis HOM05D000083 ORTHO05D003582 1.1e-54 217.6 225 57.3
Lalb_Chr19g0139361 Lupinus albus HOM05D000083 ORTHO05D003582 1.1e-54 217.6 211 56.9
PGR044G0594 Punica granatum HOM05D000083 ORTHO05D003582 4.1e-54 215.7 227 56.4
Potri.007G070100 Populus trichocarpa HOM05D000083 ORTHO05D003582 1.2e-53 214.2 221 58.4
DCAR_004230 Daucus carota HOM05D000083 ORTHO05D003582 3.5e-53 212.6 233 54.1
ATR0326G043 Amborella trichopoda HOM05D000083 ORTHO05D003582 1.0e-52 211.1 230 56.1
Sp3g11740 Schrenkiella parvula HOM05D000083 ORTHO05D003582 1.0e-52 211.1 237 52.3
unitig_22.g5627 Utricularia gibba HOM05D000083 ORTHO05D003582 2.2e-52 209.9 216 54.2
HPP92_002088 Vanilla planifolia HOM05D000083 ORTHO05D003582 2.5e-51 206.5 230 56.1
Lsat_1_v5_gn_3_33541 Lactuca sativa HOM05D000083 ORTHO05D003582 7.2e-51 204.9 162 68.5
ClCG10G011890 Citrullus lanatus HOM05D000083 ORTHO05D003582 9.4e-51 204.5 250 51.2
EL10Ac9g22930 Beta vulgaris HOM05D000083 ORTHO05D003582 1.2e-50 204.1 212 55.7
arahy.Tifrunner.gnm1.ann1.FSDW2L Arachis hypogaea HOM05D000083 ORTHO05D003582 2.1e-50 203.4 231 51.9
arahy.Tifrunner.gnm1.ann1.ZIJB47 Arachis hypogaea HOM05D000083 ORTHO05D003582 2.7e-50 203.0 225 52.4
Os04g0660500 Oryza sativa ssp. japonica HOM05D000083 ORTHO05D003582 8.0e-50 201.4 232 55.2
AL3G19360 Arabidopsis lyrata HOM05D000083 ORTHO05D003582 4.0e-49 199.1 213 54.5
Ah.01g001600 Amaranthus hybridus HOM05D000083 ORTHO05D003582 6.8e-49 198.4 232 51.7
BraA03t12978Z Brassica rapa HOM05D000083 ORTHO05D003582 6.8e-49 198.4 230 50.9
BcaC01g03989 Brassica carinata HOM05D000083 ORTHO05D003582 1.2e-48 197.6 230 50.4
Sabra07G0058700 Salix brachista HOM05D000083 ORTHO05D003582 1.2e-48 197.6 219 54.3
CDE04G1078 Ceratophyllum demersum HOM05D000083 ORTHO05D003582 1.5e-48 197.2 224 51.8
CARHR082720 Cardamine hirsuta HOM05D000083 ORTHO05D003582 2.0e-48 196.8 226 51.8
A03p38250 Brassica napus HOM05D000083 ORTHO05D003582 4.4e-48 195.7 224 51.8
Cpa.g.sc119.48 Carica papaya HOM05D000083 ORTHO05D003582 1.7e-47 193.7 198 57.1
Lalb_Chr03g0024821 Lupinus albus HOM05D000083 ORTHO05D003582 1.7e-47 193.7 230 51.7
Zm00001eb067530 Zea mays HOM05D000083 ORTHO05D003582 5.3e-46 188.7 229 53.3
Zm00001eb432730 Zea mays HOM05D000083 ORTHO05D003582 7.0e-46 188.3 231 53.2
SHI17990 Sapria himalayana HOM05D000083 ORTHO05D003582 9.1e-46 188.0 215 52.1
Hund24289 Selenicereus undatus HOM05D000083 ORTHO05D003582 1.2e-45 187.6 226 52.7
Lalb_Chr10g0095051 Lupinus albus HOM05D000083 ORTHO05D003582 5.9e-45 185.3 225 50.2
BcaB03g11558 Brassica carinata HOM05D000083 ORTHO05D003582 7.7e-45 184.9 169 60.4
A03p35590 Brassica napus HOM05D000083 ORTHO05D003582 1.7e-44 183.7 169 60.4
Oeu042808.3 Olea europaea HOM05D000083 ORTHO05D290297 6.5e-44 181.8 175 62.9
Atru.chr11.1178 Acer truncatum HOM05D000083 ORTHO05D003582 8.5e-44 181.4 192 56.8
BraA03t12735Z Brassica rapa HOM05D000083 ORTHO05D003582 1.5e-43 180.6 169 59.8
C03p43230 Brassica napus HOM05D000083 ORTHO05D003582 2.1e-42 176.8 166 60.2
BolC3t16592H Brassica oleracea HOM05D000083 ORTHO05D003582 1.4e-41 174.1 166 59.6
BcaB03g11559 Brassica carinata HOM05D000083 ORTHO05D003582 5.7e-40 168.7 226 46.0
HPP92_002093 Vanilla planifolia HOM05D000083 ORTHO05D003582 5.7e-40 168.7 230 49.1
A01p40080 Brassica napus HOM05D000083 ORTHO05D003582 1.3e-36 157.5 156 57.7
BraA01t04049Z Brassica rapa HOM05D000083 ORTHO05D003582 2.3e-36 156.8 156 57.1
Sabra07G0058200 Salix brachista HOM05D000083 ORTHO05D003582 2.9e-36 156.4 230 45.2
SEGI_08600 Sequoiadendron giganteum HOM05D000083 ORTHO05D003582 2.9e-36 156.4 181 53.6
BolC1t05099H Brassica oleracea HOM05D000083 ORTHO05D003582 8.6e-36 154.8 167 55.1
BcaB04g20987 Brassica carinata HOM05D000083 ORTHO05D003582 1.1e-35 154.5 167 55.1
C01p51560 Brassica napus HOM05D000083 ORTHO05D003582 1.1e-35 154.5 167 55.1
BcaB03g11561 Brassica carinata HOM05D000083 ORTHO05D003582 1.6e-34 150.6 225 41.3
SMO198G0032 Selaginella moellendorffii HOM05D000083 ORTHO05D003582 1.0e-33 147.9 167 53.9
SEGI_09729 Sequoiadendron giganteum HOM05D000083 ORTHO05D003582 1.0e-33 147.9 218 45.9
DCAR_026911 Daucus carota HOM05D000083 ORTHO05D003582 1.3e-31 141.0 174 48.3
Nitab4.5_0002113g0210 Nicotiana tabacum HOM05D000083 ORTHO05D003582 1.4e-30 137.5 237 42.6
Mapoly0140s0044 Marchantia polymorpha HOM05D000083 ORTHO05D003582 7.0e-30 135.2 179 46.4
Pp3c15_11760 Physcomitrium patens HOM05D000083 ORTHO05D003582 1.1e-27 127.9 164 49.4
Hma1.2p1_0005F.1_g004230 Hydrangea macrophylla HOM05D000083 ORTHO05D003582 1.8e-25 120.6 177 46.9
HPP92_002069 Vanilla planifolia HOM05D000083 ORTHO05D003582 1.5e-24 117.5 178 44.9
Pp3c9_25590 Physcomitrium patens HOM05D000083 ORTHO05D003582 2.7e-21 106.7 171 39.2
BcaB03g11553 Brassica carinata HOM05D000083 ORTHO05D003582 2.3e-20 103.6 169 43.8
Pp3c15_25040 Physcomitrium patens HOM05D000083 ORTHO05D003582 5.0e-20 102.4 153 41.2
AagrBONN_evm.TU.Sc2ySwM_344.4764 Anthoceros agrestis HOM05D000083 ORTHO05D003582 8.9e-17 91.7 101 48.5
CBR_g38927 Chara braunii HOM05D000083 ORTHO05D003582 2.0e-16 90.5 142 39.4
CBR_g66805 Chara braunii HOM05D000083 ORTHO05D003582 1.1e-14 84.7 162 36.4
PRCOL_00002034 Prasinoderma coloniale HOM05D000083 ORTHO05D003582 3.5e-13 79.7 155 34.2
A05p35920 Brassica napus HOM05D000083 ORTHO05D003582 7.6e-08 62.0 59 59.3
BraA05t22398Z Brassica rapa HOM05D000083 ORTHO05D003582 7.6e-08 62.0 59 59.3


User provided reference genes

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