Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057586.3 Olea europaea HOM05D004031 ORTHO05D006678 0.0e+00 1433.7 743 100.0
Dinv24047 Davidia involucrata HOM05D004031 ORTHO05D006678 2.6e-290 1001.9 721 72.5
CSS0004189 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 8.3e-289 996.9 762 67.8
MSTRG.19923 Avicennia marina HOM05D004031 ORTHO05D006678 1.1e-288 996.5 754 69.9
Cc06_g15550 Coffea canephora HOM05D004031 ORTHO05D006678 9.5e-285 983.4 765 67.7
Hma1.2p1_0124F.1_g058320 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 6.2e-284 980.7 759 68.8
CiPaw.10G024900 Carya illinoinensis HOM05D004031 ORTHO05D006678 2.6e-282 975.3 765 67.5
GSVIVG01033461001 Vitis vinifera HOM05D004031 ORTHO05D006678 5.4e-280 967.6 758 67.4
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 7.1e-280 967.2 762 67.2
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 7.1e-280 967.2 793 64.9
Migut.J01861 Erythranthe guttata HOM05D004031 ORTHO05D006678 2.7e-279 965.3 752 67.0
SGA_v2.0_scaffold105G30510 Striga asiatica HOM05D004031 ORTHO05D006678 7.8e-279 963.8 754 67.6
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 1.5e-277 959.5 758 66.4
MD12G1054100 Malus domestica HOM05D004031 ORTHO05D006678 2.8e-276 955.3 762 66.1
Manes.09G038300 Manihot esculenta HOM05D004031 ORTHO05D006678 4.7e-276 954.5 759 65.5
RcHm_v2.0_Chr3g0479121 Rosa chinensis HOM05D004031 ORTHO05D006678 1.5e-274 949.5 761 65.8
MD14G1053000 Malus domestica HOM05D004031 ORTHO05D006678 2.6e-274 948.7 762 65.6
CiPaw.09G027800 Carya illinoinensis HOM05D004031 ORTHO05D006678 2.9e-273 945.3 760 66.1
Prupe.7G082700 Prunus persica HOM05D004031 ORTHO05D006678 1.4e-272 943.0 762 65.5
FvH4_6g21770 Fragaria vesca HOM05D004031 ORTHO05D006678 4.2e-272 941.4 764 65.8
TAR623G1150 Trochodendron aralioides HOM05D004031 ORTHO05D006678 2.1e-268 929.1 794 63.2
SalBow6G5892 Salvia bowleyana HOM05D004031 ORTHO05D006678 1.8e-267 926.0 792 65.2
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 3.1e-267 925.2 758 64.5
Potri.016G060500 Populus trichocarpa HOM05D004031 ORTHO05D006678 7.6e-266 920.6 762 64.0
Rhsim03G0003600 Rhododendron simsii HOM05D004031 ORTHO05D006678 7.6e-266 920.6 777 64.4
Sc13g0002440 Simmondsia chinensis HOM05D004031 ORTHO05D006678 7.6e-266 920.6 757 64.1
CANSAT64G2464 Cannabis sativa HOM05D004031 ORTHO05D006678 1.7e-265 919.5 761 64.0
CAN.G454.1 Capsicum annuum HOM05D004031 ORTHO05D006678 2.2e-265 919.1 758 63.3
FAN05G0520 Fragaria x ananassa HOM05D004031 ORTHO05D006678 2.9e-265 918.7 823 61.5
Thecc.05G175900 Theobroma cacao HOM05D004031 ORTHO05D006678 2.9e-265 918.7 763 64.0
Sopen03g011490 Solanum pennellii HOM05D004031 ORTHO05D006678 6.6e-262 907.5 757 63.8
FAN09G1850 Fragaria x ananassa HOM05D004031 ORTHO05D006678 1.5e-261 906.4 792 62.5
Gorai.002G155200 Gossypium raimondii HOM05D004031 ORTHO05D006678 1.5e-261 906.4 761 63.2
Gohir.D01G124700 Gossypium hirsutum HOM05D004031 ORTHO05D006678 1.3e-260 903.3 761 62.8
HanXRQChr13g0398361 Helianthus annuus HOM05D004031 ORTHO05D006678 1.6e-260 902.9 745 63.9
TWI74G0357 Tripterygium wilfordii HOM05D004031 ORTHO05D006678 1.6e-260 902.9 763 62.8
Gohir.A01G137300 Gossypium hirsutum HOM05D004031 ORTHO05D006678 3.1e-259 898.7 761 62.8
Lalb_Chr15g0079131 Lupinus albus HOM05D004031 ORTHO05D006678 5.3e-259 897.9 764 62.3
ECA233G4423 Erigeron canadensis HOM05D004031 ORTHO05D006678 3.4e-258 895.2 756 63.2
PGR142G3960 Punica granatum HOM05D004031 ORTHO05D006678 4.9e-257 891.3 760 62.8
Atru.chr8.1164 Acer truncatum HOM05D004031 ORTHO05D006678 3.2e-256 888.6 757 63.8
DCAR_009690 Daucus carota HOM05D004031 ORTHO05D006678 3.2e-256 888.6 775 61.7
Phvul.001G144700 Phaseolus vulgaris HOM05D004031 ORTHO05D006678 3.5e-255 885.2 759 61.3
Glyma.03G147000 Glycine max HOM05D004031 ORTHO05D006678 1.3e-254 883.2 753 61.9
Nn7g35952 Nelumbo nucifera HOM05D004031 ORTHO05D006678 4.3e-253 878.2 792 59.8
Ca_08544_v3 Cicer arietinum L. HOM05D004031 ORTHO05D006678 1.6e-252 876.3 757 60.6
Glyma.19G150400 Glycine max HOM05D004031 ORTHO05D006678 3.7e-252 875.2 778 60.3
arahy.Tifrunner.gnm1.ann1.YX753W Arachis hypogaea HOM05D004031 ORTHO05D006678 8.1e-252 874.0 758 60.2
Lj1g0024200 Lotus japonicus HOM05D004031 ORTHO05D006678 8.1e-252 874.0 757 60.5
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 4.5e-250 868.2 737 64.2
TPR.G13372 Trifolium pratense HOM05D004031 ORTHO05D006678 4.5e-250 868.2 757 61.2
Psat3g066880 Pisum sativum HOM05D004031 ORTHO05D006678 5.8e-250 867.8 753 60.6
AUR62012010 Chenopodium quinoa HOM05D004031 ORTHO05D006678 7.6e-250 867.5 754 59.9
Eucgr.K01855 Eucalyptus grandis HOM05D004031 ORTHO05D006678 1.3e-249 866.7 760 60.3
Sabra16G0063400 Salix brachista HOM05D004031 ORTHO05D006678 2.9e-249 865.5 760 61.8
Aqoxy1G00041 Aquilegia oxysepala HOM05D004031 ORTHO05D006678 4.9e-249 864.8 758 60.3
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 8.4e-249 864.0 753 61.8
arahy.Tifrunner.gnm1.ann1.4B2YIP Arachis hypogaea HOM05D004031 ORTHO05D006678 1.9e-248 862.8 785 58.3
EL10Ac3g06876 Beta vulgaris HOM05D004031 ORTHO05D006678 1.2e-247 860.1 752 60.4
Medtr7g093740 Medicago truncatula HOM05D004031 ORTHO05D006678 1.6e-247 859.8 758 60.8
Potri.006G195000 Populus trichocarpa HOM05D004031 ORTHO05D006678 5.1e-246 854.7 760 60.3
Lsat_1_v5_gn_6_36500 Lactuca sativa HOM05D004031 ORTHO05D006678 1.5e-245 853.2 743 61.0
MBI13_g29636_MAGBIO Magnolia biondii HOM05D004031 ORTHO05D006678 7.4e-245 850.9 779 58.9
FAN02G1852 Fragaria x ananassa HOM05D004031 ORTHO05D006678 4.1e-243 845.1 835 56.9
Sed0017241 Sechium edule HOM05D004031 ORTHO05D006678 1.9e-240 836.3 740 59.5
Lju124A22T15 Lonicera japonica HOM05D004031 ORTHO05D006678 2.7e-239 832.4 748 61.9
MELO3C009604.2 Cucumis melo HOM05D004031 ORTHO05D006678 1.5e-237 826.6 751 59.7
Lj1A1132T32 Lonicera japonica HOM05D004031 ORTHO05D006678 5.7e-237 824.7 748 61.8
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 2.4e-235 819.3 762 59.2
AUR62015326 Chenopodium quinoa HOM05D004031 ORTHO05D006678 4.5e-234 815.1 702 61.7
VMungo1383G1586 Vigna mungo HOM05D004031 ORTHO05D006678 1.2e-231 807.0 702 60.8
ATR0598G228 Amborella trichopoda HOM05D004031 ORTHO05D006678 1.5e-229 800.0 775 54.8
Haze_20030 Corylus avellana HOM05D004031 ORTHO05D006678 4.8e-228 795.0 927 51.9
PSO339G3947 Papaver somniferum HOM05D004031 ORTHO05D006678 4.8e-228 795.0 764 56.4
THA.LOC104799283 Tarenaya hassleriana HOM05D004031 ORTHO05D006678 4.1e-227 792.0 742 56.1
PSO384G3799 Papaver somniferum HOM05D004031 ORTHO05D006678 2.2e-225 786.2 764 55.9
HPP92_024784 Vanilla planifolia HOM05D004031 ORTHO05D006678 2.3e-222 776.2 755 56.3
Carub.0003s1135 Capsella rubella HOM05D004031 ORTHO05D006678 4.8e-220 768.5 740 55.1
AT3G12010 Arabidopsis thaliana HOM05D004031 ORTHO05D006678 8.2e-220 767.7 740 55.1
Sp3g10240 Schrenkiella parvula HOM05D004031 ORTHO05D006678 1.6e-218 763.5 740 54.5
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 1.1e-216 757.3 741 54.7
CARHR086570 Cardamine hirsuta HOM05D004031 ORTHO05D006678 3.2e-216 755.7 738 54.6
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 4.2e-216 755.4 740 54.2
Aa31LG3G5440 Aethionema arabicum HOM05D004031 ORTHO05D006678 8.0e-215 751.1 740 53.4
Os10g0400900 Oryza sativa ssp. japonica HOM05D004031 ORTHO05D006678 5.2e-214 748.4 736 53.8
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 2.1e-207 726.5 740 53.4
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 1.5e-205 720.3 771 51.4
A03p37440 Brassica napus HOM05D004031 ORTHO05D006678 5.5e-200 701.8 737 52.2
Solyc03g053010.4 Solanum lycopersicum HOM05D004031 ORTHO05D006678 9.5e-200 701.0 647 60.4
CDE05G0445 Ceratophyllum demersum HOM05D004031 ORTHO05D006678 2.8e-199 699.5 751 51.3
FAN14G1892 Fragaria x ananassa HOM05D004031 ORTHO05D006678 3.6e-199 699.1 657 59.1
Sed0010020 Sechium edule HOM05D004031 ORTHO05D006678 1.6e-194 683.7 756 51.6
unitig_21.g20577 Utricularia gibba HOM05D004031 ORTHO05D006678 2.5e-192 676.4 695 54.4
Pp3c6_28540 Physcomitrium patens HOM05D004031 ORTHO05D006678 1.8e-182 643.7 747 47.3
Hma1.2p1_0124F.1_g058310 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 3.1e-182 642.9 434 75.1
Peaxi162Scf00463g00518 Petunia axillaris HOM05D004031 ORTHO05D006678 7.0e-179 631.7 602 58.3
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 1.0e-177 627.9 763 47.8
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 1.0e-177 627.9 763 47.8
BolC5t34246H Brassica oleracea HOM05D004031 ORTHO05D006678 1.0e-177 627.9 763 47.8
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 3.9e-177 625.9 717 49.5
AL3G23620 Arabidopsis lyrata HOM05D004031 ORTHO05D006678 2.4e-171 606.7 614 55.7
Mapoly0005s0167 Marchantia polymorpha HOM05D004031 ORTHO05D006678 1.5e-168 597.4 834 42.4
Zm00001eb048600 Zea mays HOM05D004031 ORTHO05D006678 1.4e-158 564.3 587 50.1
QL07p024699 Quercus lobata HOM05D004031 ORTHO05D006678 4.0e-158 562.8 510 62.2
CsaV3_3G038610 Cucumis sativus L. HOM05D004031 ORTHO05D006678 4.4e-157 559.3 550 56.2
Nitab4.5_0000009g0250 Nicotiana tabacum HOM05D004031 ORTHO05D006678 1.4e-155 554.3 498 61.6
SMO143G0277 Selaginella moellendorffii HOM05D004031 ORTHO05D006678 1.4e-155 554.3 729 43.9
ClCG10G017700 Citrullus lanatus HOM05D004031 ORTHO05D006678 1.1e-152 544.7 398 67.1
Thhalv10020623m.g Eutrema salsugineum HOM05D004031 ORTHO05D006678 1.1e-147 528.1 549 54.6
Aa31LG3G5500 Aethionema arabicum HOM05D004031 ORTHO05D006678 2.3e-145 520.4 431 59.4
SEGI_16646 Sequoiadendron giganteum HOM05D004031 ORTHO05D006678 1.4e-115 421.4 573 43.8
QL07p024684 Quercus lobata HOM05D004031 ORTHO05D006678 3.7e-111 406.8 260 75.0
SHI31751 Sapria himalayana HOM05D004031 ORTHO05D006678 4.1e-102 376.7 527 45.2
Cpa.g.c40176 Carica papaya HOM05D004031 ORTHO05D006678 1.1e-75 288.9 234 66.7
Cpa.g.sc85.42 Carica papaya HOM05D004031 ORTHO05D006678 8.0e-74 282.7 194 68.0
Psat7g023080 Pisum sativum HOM05D004031 ORTHO05D006678 3.0e-73 280.8 362 44.2
TAR623G0223 Trochodendron aralioides HOM05D004031 ORTHO05D006678 1.4e-70 271.9 173 78.0
Solyc03g053000.4 Solanum lycopersicum HOM05D004031 ORTHO05D006678 2.1e-53 214.9 167 62.9
CSS0030127 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 3.0e-52 211.1 161 62.7
Peaxi162Scf00463g00519 Petunia axillaris HOM05D004031 ORTHO05D006678 8.6e-52 209.5 141 70.2
Nitab4.5_0000009g0260 Nicotiana tabacum HOM05D004031 ORTHO05D011186 6.8e-49 199.9 134 70.9
CSS0049250 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 8.9e-49 199.5 118 83.1
SHI31745 Sapria himalayana HOM05D004031 ORTHO05D006678 3.1e-41 174.5 143 57.3
Psat4g142720 Pisum sativum HOM05D003784 ORTHO05D004345 7.8e-37 159.8 130 63.8
CSS0030002 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 7.3e-35 153.3 114 64.9
PRCOL_00003629 Prasinoderma coloniale HOM05D004031 ORTHO05D006678 1.3e-31 142.5 629 25.3
Psat4g142800 Pisum sativum HOM05D003784 ORTHO05D004345 4.2e-30 137.5 85 76.5
CBR_g44463 Chara braunii HOM05D000019 ORTHO05D000002 6.0e-29 133.7 154 44.2
CBR_g32657 Chara braunii HOM05D004031 ORTHO05D006678 9.6e-27 126.3 243 33.3
BcaB06g25555 Brassica carinata HOM05D004031 ORTHO05D006678 4.8e-26 124.0 100 59.0
Cre08.g370250 Chlamydomonas reinhardtii HOM05D004031 ORTHO05D006678 8.1e-26 123.2 531 23.7
Nn3g18463 Nelumbo nucifera HOM05D004031 ORTHO05D006678 3.4e-24 117.9 74 75.7
Aa31LG3G5510 Aethionema arabicum HOM05D004031 ORTHO05D006678 1.3e-23 115.9 91 59.3
CBR_g32659 Chara braunii HOM05D001409 ORTHO05D001511 2.5e-19 101.7 154 34.4
C05p55850 Brassica napus HOM05D004031 ORTHO05D006678 4.8e-18 97.4 89 44.9
BolC5t34254H Brassica oleracea HOM05D004031 ORTHO05D006678 4.8e-18 97.4 89 44.9
MCO13G277 Micromonas commoda HOM05D004031 ORTHO05D006678 1.4e-17 95.9 367 27.8
SHI31749 Sapria himalayana HOM05D003430 ORTHO05D004809 1.4e-09 69.3 58 56.9
Nn2g13219 Nelumbo nucifera HOM05D004031 ORTHO05D006678 6.9e-09 67.0 47 68.1
SHI31750 Sapria himalayana HOM05D003430 ORTHO05D014065 5.9e-08 63.9 85 44.7


User provided reference genes

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