Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu056352.1 Olea europaea HOM05D023536 ORTHO05D022981 1.7e-63 245.7 119 100.0
Oeu053290.1 Olea europaea HOM05D023536 ORTHO05D022981 1.1e-36 156.8 100 79.0
MSTRG.4865 Avicennia marina HOM05D000250 ORTHO05D002850 2.6e-19 99.0 94 63.8
unitig_0.g1275 Utricularia gibba HOM05D000250 ORTHO05D002850 2.6e-19 99.0 90 62.2
SGA_v2.0_scaffold43G16440 Striga asiatica HOM05D000250 ORTHO05D002850 3.8e-18 95.1 92 60.9
Oeu014664.1 Olea europaea HOM05D023536 ORTHO05D022981 1.4e-17 93.2 91 60.4
SGA_v2.0_scaffold11G05658 Striga asiatica HOM05D000250 ORTHO05D002850 1.9e-17 92.8 92 59.8
unitig_61.g26396 Utricularia gibba HOM05D000250 ORTHO05D002850 4.2e-17 91.7 86 61.6
SalBow3G3116 Salvia bowleyana HOM05D000250 ORTHO05D002850 1.6e-16 89.7 96 61.5
Migut.N01432 Erythranthe guttata HOM05D000250 ORTHO05D002850 3.6e-16 88.6 99 55.6
Oeu004519.3 Olea europaea HOM05D000250 ORTHO05D002850 2.3e-15 85.9 91 57.1
Migut.B01716 Erythranthe guttata HOM05D000250 ORTHO05D002850 5.7e-14 81.3 99 51.5
Oeu044720.1 Olea europaea HOM05D023536 ORTHO05D022981 9.7e-14 80.5 92 58.7
MSTRG.20815 Avicennia marina HOM05D000250 ORTHO05D002850 4.8e-13 78.2 96 52.1
Solyc10g017530.3 Solanum lycopersicum HOM05D000250 ORTHO05D002850 6.5e-10 67.8 93 48.4
Sopen10g006340 Solanum pennellii HOM05D000250 ORTHO05D002850 6.5e-10 67.8 93 48.4
Nn6g33516 Nelumbo nucifera HOM05D000250 ORTHO05D002850 1.4e-09 66.6 89 49.4
Gohir.A07G142800 Gossypium hirsutum HOM05D000250 ORTHO05D002850 3.2e-09 65.5 96 47.9
TAR375G0497 Trochodendron aralioides HOM05D000250 ORTHO05D002850 4.2e-09 65.1 89 51.7
vmacro13303 Vaccinium macrocarpon HOM05D000250 ORTHO05D002850 7.2e-09 64.3 90 50.0
Gohir.D08G043600 Gossypium hirsutum HOM05D000250 ORTHO05D002850 1.6e-08 63.2 94 48.9
Gorai.004G042200 Gossypium raimondii HOM05D000250 ORTHO05D002850 1.6e-08 63.2 94 48.9
Manes.01G259600 Manihot esculenta HOM05D000250 ORTHO05D002850 3.6e-08 62.0 87 49.4
ClCG05G001650 Citrullus lanatus HOM05D000250 ORTHO05D002850 4.7e-08 61.6 101 45.5
Gohir.D07G148600 Gossypium hirsutum HOM05D000250 ORTHO05D002850 1.8e-07 59.7 102 43.1
TAR636G2662 Trochodendron aralioides HOM05D000250 ORTHO05D002850 3.0e-07 58.9 89 49.4
Lj9C581T5 Lonicera japonica HOM05D000250 ORTHO05D002850 3.9e-07 58.5 88 53.4
MELO3C006121.2 Cucumis melo HOM05D000250 ORTHO05D002850 5.1e-07 58.2 96 45.8
CsaV3_3G009030 Cucumis sativus L. HOM05D000250 ORTHO05D002850 5.1e-07 58.2 96 45.8
SGA_v2.0_scaffold277G46669 Striga asiatica HOM05D000008 ORTHO05D002850 5.1e-07 58.2 91 49.5
Duzib138G1814 Durio zibethinus HOM05D000250 ORTHO05D002850 6.7e-07 57.8 97 48.5
Gorai.001G169800 Gossypium raimondii HOM05D000250 ORTHO05D002850 6.7e-07 57.8 102 43.1
TAR374G0084 Trochodendron aralioides HOM05D000250 ORTHO05D002850 6.7e-07 57.8 89 46.1
Dinv32458 Davidia involucrata HOM05D000250 ORTHO05D002850 1.1e-06 57.0 100 43.0
Nn1g01449 Nelumbo nucifera HOM05D000250 ORTHO05D002850 1.1e-06 57.0 89 44.9
Actinidia33429 Actinidia chinensis HOM05D000250 ORTHO05D002850 1.5e-06 56.6 97 44.3
Duzib268G0821 Durio zibethinus HOM05D000250 ORTHO05D002850 1.5e-06 56.6 92 45.7
Manes.05G037200 Manihot esculenta HOM05D000250 ORTHO05D002850 1.5e-06 56.6 94 45.7
Actinidia10007 Actinidia chinensis HOM05D000250 ORTHO05D002850 2.6e-06 55.8 92 44.6
Sc22g0000190 Simmondsia chinensis HOM05D000250 ORTHO05D002850 4.4e-06 55.1 89 47.2
Nitab4.5_0000386g0190 Nicotiana tabacum HOM05D000250 ORTHO05D002850 5.7e-06 54.7 97 42.3
Dinv43788 Davidia involucrata HOM05D000250 ORTHO05D002850 7.4e-06 54.3 111 40.5
Gohir.A08G032700 Gossypium hirsutum HOM05D000250 ORTHO05D002850 9.7e-06 53.9 96 43.8


User provided reference genes

Program Settings