Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055408.1 Olea europaea HOM05D001880 ORTHO05D004730 7.4e-87 323.9 174 100.0
Oeu012185.1 Olea europaea HOM05D001880 ORTHO05D004730 2.0e-15 86.7 71 64.8
GSVIVG01035689001 Vitis vinifera HOM05D001880 ORTHO05D004730 7.5e-15 84.7 54 77.8
DCAR_003047 Daucus carota HOM05D001880 ORTHO05D004730 9.8e-15 84.3 51 82.4
Sc24g0001330 Simmondsia chinensis HOM05D001880 ORTHO05D004730 1.3e-14 84.0 72 63.9
Migut.A00234 Erythranthe guttata HOM05D001880 ORTHO05D004730 1.7e-14 83.6 71 63.4
SalBow4G1753 Salvia bowleyana HOM05D001880 ORTHO05D004730 2.2e-14 83.2 51 78.4
AUR62009326 Chenopodium quinoa HOM05D001880 ORTHO05D004730 2.9e-14 82.8 72 63.9
AUR62023013 Chenopodium quinoa HOM05D001880 ORTHO05D004730 3.7e-14 82.4 72 63.9
Lj8C602G7 Lonicera japonica HOM05D001880 ORTHO05D004730 3.7e-14 82.4 51 78.4
SGA_v2.0_scaffold185G40074 Striga asiatica HOM05D001880 ORTHO05D004730 3.7e-14 82.4 71 64.8
Dinv30257 Davidia involucrata HOM05D001880 ORTHO05D004730 6.4e-14 81.6 57 70.2
MSTRG.25899 Avicennia marina HOM05D001880 ORTHO05D004730 1.1e-13 80.9 71 62.0
Peaxi162Scf00523g00112 Petunia axillaris HOM05D001880 ORTHO05D004730 1.1e-13 80.9 51 72.5
Dinv14229 Davidia involucrata HOM05D001880 ORTHO05D004730 1.4e-13 80.5 51 78.4
GSVIVG01035666001 Vitis vinifera HOM05D001880 ORTHO05D004730 1.4e-13 80.5 51 80.4
Aqoxy7G01616 Aquilegia oxysepala HOM05D001880 ORTHO05D004730 1.8e-13 80.1 52 82.7
Actinidia31224 Actinidia chinensis HOM05D001880 ORTHO05D004730 3.2e-13 79.3 51 78.4
Lj7C706T10 Lonicera japonica HOM05D001880 ORTHO05D004730 3.2e-13 79.3 72 58.3
Rhsim02G0181700 Rhododendron simsii HOM05D001880 ORTHO05D004730 4.1e-13 79.0 72 59.7
Nn5g30497 Nelumbo nucifera HOM05D001880 ORTHO05D004730 5.4e-13 78.6 51 74.5
Cc08_g09020 Coffea canephora HOM05D001880 ORTHO05D004730 1.6e-12 77.0 71 57.7
TAR383G0573 Trochodendron aralioides HOM05D001880 ORTHO05D004730 1.6e-12 77.0 51 74.5
DCAR_007706 Daucus carota HOM05D001880 ORTHO05D004730 2.7e-12 76.3 72 56.9
Hma1.2p1_0140F.1_g063490 Hydrangea macrophylla HOM05D001880 ORTHO05D004730 2.7e-12 76.3 51 72.5
vmacro11077 Vaccinium macrocarpon HOM05D001880 ORTHO05D004730 2.7e-12 76.3 72 58.3
CSS0018831 Camellia sinensis var. sinensis HOM05D001880 ORTHO05D004730 3.5e-12 75.9 51 74.5
CANSAT25G1999 Cannabis sativa HOM05D001880 ORTHO05D004730 3.5e-12 75.9 72 58.3
Hund03438 Selenicereus undatus HOM05D001880 ORTHO05D004730 3.5e-12 75.9 68 60.3
TAR626G0413 Trochodendron aralioides HOM05D001880 ORTHO05D004730 3.5e-12 75.9 51 72.5
Lsat_1_v5_gn_5_33160 Lactuca sativa HOM05D001880 ORTHO05D004730 6.0e-12 75.1 72 58.3
Cpa.g.sc78.77 Carica papaya HOM05D001880 ORTHO05D004730 7.8e-12 74.7 51 72.5
QL12p026586 Quercus lobata HOM05D001880 ORTHO05D004730 1.0e-11 74.3 51 70.6
Ah.16g105290 Amaranthus hybridus HOM05D001880 ORTHO05D004730 1.7e-11 73.6 72 55.6
Prupe.1G452100 Prunus persica HOM05D001880 ORTHO05D004730 1.7e-11 73.6 54 68.5
PGSC0003DMG400010836 Solanum tuberosum HOM05D001880 ORTHO05D004730 2.3e-11 73.2 71 56.3
HanXRQChr07g0190061 Helianthus annuus HOM05D001880 ORTHO05D004730 3.0e-11 72.8 73 57.5
CAN.G21.30 Capsicum annuum HOM05D001880 ORTHO05D004730 3.9e-11 72.4 71 54.9
Glyma.06G082200 Glycine max HOM05D001880 ORTHO05D004730 3.9e-11 72.4 51 66.7
MD08G1117800 Malus domestica HOM05D001880 ORTHO05D004730 3.9e-11 72.4 54 66.7
ECA246G2183 Erigeron canadensis HOM05D001880 ORTHO05D004730 6.6e-11 71.6 73 57.5
Zm00001eb202540 Zea mays HOM05D002249 ORTHO05D002443 6.6e-11 71.6 52 73.1
Eucgr.C01584 Eucalyptus grandis HOM05D001880 ORTHO05D004730 8.6e-11 71.2 71 52.1
FvH4_2g36050 Fragaria vesca HOM05D001880 ORTHO05D004730 8.6e-11 71.2 51 66.7
FAN15G1328 Fragaria x ananassa HOM05D001880 ORTHO05D004730 8.6e-11 71.2 51 66.7
FAN27G3372 Fragaria x ananassa HOM05D001880 ORTHO05D004730 8.6e-11 71.2 51 66.7
PSO210G2288 Papaver somniferum HOM05D001880 ORTHO05D004730 8.6e-11 71.2 52 71.2
PSO782G2488 Papaver somniferum HOM05D001880 ORTHO05D004730 8.6e-11 71.2 53 71.7
Sopen08g022160 Solanum pennellii HOM05D001880 ORTHO05D004730 8.6e-11 71.2 51 68.6
CDE05G1114 Ceratophyllum demersum HOM05D001880 ORTHO05D004730 1.1e-10 70.9 51 66.7
Lj1g0005918 Lotus japonicus HOM05D001880 ORTHO05D004730 1.1e-10 70.9 51 68.6
MBI04_g19165_MAGBIO Magnolia biondii HOM05D001880 ORTHO05D004730 1.1e-10 70.9 71 54.9
Phvul.009G106600 Phaseolus vulgaris HOM05D001880 ORTHO05D004730 1.1e-10 70.9 51 68.6
Solyc08g068310.3 Solanum lycopersicum HOM05D001880 ORTHO05D004730 1.1e-10 70.9 51 66.7
Nitab4.5_0000052g0190 Nicotiana tabacum HOM05D001880 ORTHO05D004730 1.5e-10 70.5 71 53.5
PGR031G0301 Punica granatum HOM05D001880 ORTHO05D004730 1.5e-10 70.5 77 51.9
TWI32G0570 Tripterygium wilfordii HOM05D001880 ORTHO05D004730 1.5e-10 70.5 51 68.6
COL.COLO4_18692 Corchorus olitorius HOM05D001880 ORTHO05D004730 1.9e-10 70.1 51 70.6
PSO210G1470 Papaver somniferum HOM05D001880 ORTHO05D004730 1.9e-10 70.1 52 69.2
AL7G19020 Arabidopsis lyrata HOM05D001880 ORTHO05D004730 2.5e-10 69.7 51 68.6
Carub.0007s0776 Capsella rubella HOM05D001880 ORTHO05D004730 2.5e-10 69.7 51 68.6
CARHR240720 Cardamine hirsuta HOM05D001880 ORTHO05D004730 2.5e-10 69.7 51 68.6
PSO832G4225 Papaver somniferum HOM05D001880 ORTHO05D004730 2.5e-10 69.7 53 71.7
HPP92_013605 Vanilla planifolia HOM05D001880 ORTHO05D004730 2.5e-10 69.7 72 56.9
CiPaw.08G023900 Carya illinoinensis HOM05D001880 ORTHO05D004730 3.3e-10 69.3 51 66.7
CDE05G2503 Ceratophyllum demersum HOM05D001880 ORTHO05D004730 3.3e-10 69.3 51 64.7
Haze_21861 Corylus avellana HOM05D001880 ORTHO05D004730 3.3e-10 69.3 51 66.7
RcHm_v2.0_Chr6g0305801 Rosa chinensis HOM05D001880 ORTHO05D004730 4.3e-10 68.9 51 64.7
AT4G32720 Arabidopsis thaliana HOM05D001880 ORTHO05D004730 5.6e-10 68.6 51 66.7
THA.LOC104803768 Tarenaya hassleriana HOM05D001880 ORTHO05D004730 5.6e-10 68.6 51 66.7
Glyma.04G080500 Glycine max HOM05D001880 ORTHO05D004730 7.3e-10 68.2 51 60.8
MD15G1097300 Malus domestica HOM05D001880 ORTHO05D004730 7.3e-10 68.2 72 54.2
Sp7g30490 Schrenkiella parvula HOM05D001880 ORTHO05D004730 7.3e-10 68.2 51 66.7
BcaB03g12759 Brassica carinata HOM05D001880 ORTHO05D004730 9.5e-10 67.8 51 66.7
Nitab4.5_0007240g0020 Nicotiana tabacum HOM05D001880 ORTHO05D004730 9.5e-10 67.8 71 52.1
arahy.Tifrunner.gnm1.ann1.KUD1W7 Arachis hypogaea HOM05D001880 ORTHO05D004730 1.2e-09 67.4 68 51.5
Gohir.D05G049600 Gossypium hirsutum HOM05D001880 ORTHO05D004730 1.2e-09 67.4 51 68.6
Gorai.009G050900 Gossypium raimondii HOM05D001880 ORTHO05D004730 1.2e-09 67.4 51 68.6
BcaNung06641 Brassica carinata HOM05D001880 ORTHO05D004730 1.6e-09 67.0 51 66.7
A01p05590 Brassica napus HOM05D001880 ORTHO05D004730 1.6e-09 67.0 51 66.7
A08p17950 Brassica napus HOM05D001880 ORTHO05D004730 1.6e-09 67.0 51 66.7
C01p06170 Brassica napus HOM05D001880 ORTHO05D004730 1.6e-09 67.0 51 66.7
C03p87060 Brassica napus HOM05D001880 ORTHO05D000054 1.6e-09 67.0 51 66.7
BolC1t00615H Brassica oleracea HOM05D001880 ORTHO05D004730 1.6e-09 67.0 51 66.7
BolC3t21003H Brassica oleracea HOM05D001880 ORTHO05D004730 1.6e-09 67.0 51 66.7
BraA01t00530Z Brassica rapa HOM05D001880 ORTHO05D004730 1.6e-09 67.0 51 66.7
BraA08t33746Z Brassica rapa HOM05D001880 ORTHO05D004730 1.6e-09 67.0 51 66.7
Ciclev10008260m.g Citrus clementina HOM05D001880 ORTHO05D004730 1.6e-09 67.0 82 46.3
Thhalv10025209m.g Eutrema salsugineum HOM05D001880 ORTHO05D004730 1.6e-09 67.0 51 66.7
Psat6g035680 Pisum sativum HOM05D001880 ORTHO05D004730 1.6e-09 67.0 51 60.8
TPR.G20025 Trifolium pratense HOM05D001880 ORTHO05D004730 1.6e-09 67.0 51 58.8
Sabra06G0189200 Salix brachista HOM05D001880 ORTHO05D004730 2.1e-09 66.6 58 58.6
Atru.chr7.2155 Acer truncatum HOM05D001880 ORTHO05D004730 2.8e-09 66.2 72 51.4
arahy.Tifrunner.gnm1.ann1.I11X1M Arachis hypogaea HOM05D001880 ORTHO05D004730 2.8e-09 66.2 58 56.9
Gohir.A05G048100 Gossypium hirsutum HOM05D001880 ORTHO05D004730 2.8e-09 66.2 51 66.7
Lalb_Chr23g0269481 Lupinus albus HOM05D001880 ORTHO05D004730 2.8e-09 66.2 51 62.7
Potri.006G241800 Populus trichocarpa HOM05D001880 ORTHO05D004730 2.8e-09 66.2 57 59.6
VMungo1309G0461 Vigna mungo HOM05D001880 ORTHO05D005098 2.8e-09 66.2 51 62.7
Zm00001eb425750 Zea mays HOM05D001880 ORTHO05D004730 2.8e-09 66.2 73 57.5
Duzib168G0571 Durio zibethinus HOM05D001880 ORTHO05D004730 3.6e-09 65.9 51 68.6
Thecc.09G040300 Theobroma cacao HOM05D001880 ORTHO05D004730 3.6e-09 65.9 72 55.6
ATR0315G050 Amborella trichopoda HOM05D001880 ORTHO05D004730 4.7e-09 65.5 51 62.7
Phvul.001G061100 Phaseolus vulgaris HOM05D001880 ORTHO05D004730 4.7e-09 65.5 51 62.7
Potri.018G037900 Populus trichocarpa HOM05D001880 ORTHO05D004730 4.7e-09 65.5 51 64.7
BcaC09g52067 Brassica carinata HOM05D001880 ORTHO05D004730 6.2e-09 65.1 51 64.7
Duzib150G1399 Durio zibethinus HOM05D001880 ORTHO05D004730 6.2e-09 65.1 51 66.7
Manes.03G063200 Manihot esculenta HOM05D001880 ORTHO05D004730 6.2e-09 65.1 51 62.7
Glyma.17G190500 Glycine max HOM05D001880 ORTHO05D004730 3.1e-08 62.8 54 55.6
TWI63G1191 Tripterygium wilfordii HOM05D001880 ORTHO05D004730 3.1e-08 62.8 51 60.8
Zm00001eb246770 Zea mays HOM05D001880 ORTHO05D004730 3.1e-08 62.8 52 67.3
Os02g0610400 Oryza sativa ssp. japonica HOM05D001880 ORTHO05D004730 6.8e-08 61.6 52 65.4
Aa31LG2G17280 Aethionema arabicum HOM05D001880 ORTHO05D004730 1.2e-07 60.8 51 64.7
Cfa013347 Carpinus fangiana HOM05D001880 ORTHO05D005098 1.5e-07 60.5 53 64.2
MELO3C011157.2 Cucumis melo HOM05D001880 ORTHO05D004730 2.0e-07 60.1 52 59.6
CsaV3_2G031070 Cucumis sativus L. HOM05D001880 ORTHO05D004730 2.0e-07 60.1 52 61.5
Gohir.A07G023700 Gossypium hirsutum HOM05D001880 ORTHO05D004730 3.4e-07 59.3 52 61.5
Medtr1g026890 Medicago truncatula HOM05D001880 ORTHO05D004730 3.4e-07 59.3 52 57.7
VMungo0647G0420 Vigna mungo HOM05D001880 ORTHO05D004730 3.4e-07 59.3 51 56.9
EL10Ac2g04069 Beta vulgaris HOM05D001880 ORTHO05D004730 5.8e-07 58.5 51 54.9
Sed0005261 Sechium edule HOM05D001880 ORTHO05D004730 7.5e-07 58.2 52 55.8
ClCG08G012380 Citrullus lanatus HOM05D001880 ORTHO05D004730 1.3e-06 57.4 51 54.9
Gorai.001G028400 Gossypium raimondii HOM05D001880 ORTHO05D004730 1.3e-06 57.4 52 59.6
Manes.04G129200 Manihot esculenta HOM05D001880 ORTHO05D004730 1.7e-06 57.0 65 43.1
Sed0010239 Sechium edule HOM05D001880 ORTHO05D004730 1.7e-06 57.0 72 45.8
unitig_747.g21869 Utricularia gibba HOM05D001880 ORTHO05D004730 2.9e-06 56.2 39 64.1
MBI01_g07170_MAGBIO Magnolia biondii HOM05D001880 ORTHO05D004730 3.7e-06 55.8 72 41.7
BcaNung07152 Brassica carinata HOM05D001880 ORTHO05D004730 4.9e-06 55.5 51 54.9
A07p26390 Brassica napus HOM05D001880 ORTHO05D004730 4.9e-06 55.5 51 54.9
C06p28780 Brassica napus HOM05D001880 ORTHO05D004730 4.9e-06 55.5 51 54.9
BolC6t38048H Brassica oleracea HOM05D001880 ORTHO05D004730 4.9e-06 55.5 51 54.9
BraA07t30283Z Brassica rapa HOM05D001880 ORTHO05D004730 4.9e-06 55.5 51 54.9
Thhalv10018639m.g Eutrema salsugineum HOM05D001880 ORTHO05D004730 4.9e-06 55.5 52 51.9
SHI18622 Sapria himalayana HOM05D001880 ORTHO05D004730 4.9e-06 55.5 51 51.0
AagrBONN_evm.TU.Sc2ySwM_228.5048 Anthoceros agrestis HOM05D001880 ORTHO05D004730 6.4e-06 55.1 58 48.3


User provided reference genes

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