Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054897.1 Olea europaea HOM05D005097 ORTHO05D006186 4.1e-77 291.6 177 100.0
Oeu045409.1 Olea europaea HOM05D005097 ORTHO05D006186 1.2e-47 193.7 184 73.9
Cc11_g13240 Coffea canephora HOM05D005097 ORTHO05D006186 6.9e-24 114.8 180 45.6
Atru.chr11.1825 Acer truncatum HOM05D005097 ORTHO05D006186 1.2e-23 114.0 188 45.7
Oeu013625.1 Olea europaea HOM05D005097 ORTHO05D006186 1.2e-23 114.0 183 53.0
Dinv34170 Davidia involucrata HOM05D005097 ORTHO05D006186 3.4e-23 112.5 179 44.7
Migut.E00105 Erythranthe guttata HOM05D005097 ORTHO05D006186 3.8e-22 109.0 190 43.7
Hma1.2p1_0598F.1_g186730 Hydrangea macrophylla HOM05D005097 ORTHO05D006186 1.1e-21 107.5 187 44.4
MSTRG.689 Avicennia marina HOM05D005097 ORTHO05D006186 1.4e-21 107.1 189 43.4
MSTRG.7812 Avicennia marina HOM05D005097 ORTHO05D006186 2.5e-21 106.3 194 42.8
Duzib251G0564 Durio zibethinus HOM05D005097 ORTHO05D006186 3.2e-21 105.9 194 41.8
COL.COLO4_22981 Corchorus olitorius HOM05D005097 ORTHO05D006186 5.5e-21 105.1 187 41.7
CiPaw.05G137400 Carya illinoinensis HOM05D005097 ORTHO05D006186 9.3e-21 104.4 186 50.0
Oeu027980.1 Olea europaea HOM05D005097 ORTHO05D006186 9.3e-21 104.4 181 49.2
MSTRG.13412 Avicennia marina HOM05D005097 ORTHO05D006186 1.2e-20 104.0 184 42.9
Gohir.A13G073300 Gossypium hirsutum HOM05D005097 ORTHO05D006186 1.6e-20 103.6 191 42.4
Migut.L01312 Erythranthe guttata HOM05D005097 ORTHO05D006186 2.1e-20 103.2 188 47.3
Gohir.D13G073300 Gossypium hirsutum HOM05D005097 ORTHO05D006186 2.1e-20 103.2 192 41.7
Gorai.013G084000 Gossypium raimondii HOM05D005097 ORTHO05D006186 2.1e-20 103.2 192 41.7
Hma1.2p1_0265F.1_g106660 Hydrangea macrophylla HOM05D005097 ORTHO05D006186 2.7e-20 102.8 180 43.3
CiPaw.06G083100 Carya illinoinensis HOM05D005097 ORTHO05D006186 7.9e-20 101.3 187 47.6
SalBow2G0279 Salvia bowleyana HOM05D005097 ORTHO05D006186 7.9e-20 101.3 190 41.6
SalBow2G3468 Salvia bowleyana HOM05D005097 ORTHO05D006186 1.8e-19 100.1 190 41.1
Thecc.02G349700 Theobroma cacao HOM05D005097 ORTHO05D006186 2.3e-19 99.8 204 46.1
TAR629G2181 Trochodendron aralioides HOM05D005097 ORTHO05D006186 3.0e-19 99.4 189 41.8
CSS0049826 Camellia sinensis var. sinensis HOM05D005097 ORTHO05D006186 3.9e-19 99.0 181 42.0
Prupe.1G272000 Prunus persica HOM05D005097 ORTHO05D006186 8.7e-19 97.8 204 37.7
Haze_12031 Corylus avellana HOM05D005097 ORTHO05D006186 1.5e-18 97.1 186 46.2
Glyma.01G045200 Glycine max HOM05D005097 ORTHO05D006186 1.5e-18 97.1 177 40.7
QL03p064734 Quercus lobata HOM05D005097 ORTHO05D006186 2.5e-18 96.3 191 46.1
Gohir.A03G099800 Gossypium hirsutum HOM05D005097 ORTHO05D006186 3.3e-18 95.9 188 41.5
Lj2g0000799 Lotus japonicus HOM05D005097 ORTHO05D006186 1.6e-17 93.6 183 38.3
TAR622G0694 Trochodendron aralioides HOM05D005097 ORTHO05D006186 2.1e-17 93.2 169 43.2
Manes.05G099600 Manihot esculenta HOM05D005097 ORTHO05D006186 2.8e-17 92.8 192 46.4
Rhsim12G0061600 Rhododendron simsii HOM05D005097 ORTHO05D006186 2.8e-17 92.8 177 39.5
Cpa.g.c36484 Carica papaya HOM05D005097 ORTHO05D006186 3.7e-17 92.4 179 39.1
FAN17G3076 Fragaria x ananassa HOM05D005097 ORTHO05D006186 3.7e-17 92.4 184 43.5
Lsat_1_v5_gn_3_52761 Lactuca sativa HOM05D005097 ORTHO05D006186 6.2e-17 91.7 191 40.3
MSTRG.2351 Avicennia marina HOM05D005097 ORTHO05D006186 8.2e-17 91.3 172 40.1
RcHm_v2.0_Chr4g0440081 Rosa chinensis HOM05D005097 ORTHO05D006186 8.2e-17 91.3 181 44.8
Sopen05g003200 Solanum pennellii HOM05D005097 ORTHO05D006186 8.2e-17 91.3 187 42.2
FAN07G0101 Fragaria x ananassa HOM05D005097 ORTHO05D006186 1.1e-16 90.9 181 42.5
Ca_04768_v3 Cicer arietinum L. HOM05D005097 ORTHO05D006186 1.4e-16 90.5 183 38.3
Gorai.005G140300 Gossypium raimondii HOM05D005097 ORTHO05D006186 1.4e-16 90.5 188 38.8
Cfa009001 Carpinus fangiana HOM05D005097 ORTHO05D006186 1.8e-16 90.1 181 46.4
Solyc05g007240.1 Solanum lycopersicum HOM05D005097 ORTHO05D006186 2.4e-16 89.7 187 42.2
FAN12G0365 Fragaria x ananassa HOM05D005097 ORTHO05D006186 4.1e-16 89.0 184 44.6
Glyma.08G299000 Glycine max HOM05D005097 ORTHO05D006186 4.1e-16 89.0 183 44.3
Ciclev10032896m.g Citrus clementina HOM05D005097 ORTHO05D006186 5.3e-16 88.6 189 42.9
Phvul.003G067200 Phaseolus vulgaris HOM05D005097 ORTHO05D006186 6.9e-16 88.2 183 38.8
Gohir.D02G124700 Gossypium hirsutum HOM05D005097 ORTHO05D006186 9.0e-16 87.8 188 38.3
FAN22G0952 Fragaria x ananassa HOM05D005097 ORTHO05D006186 1.2e-15 87.4 180 43.9
Nn4g23108 Nelumbo nucifera HOM05D005097 ORTHO05D006186 1.2e-15 87.4 183 37.7
Nitab4.5_0002151g0010 Nicotiana tabacum HOM05D005097 ORTHO05D006186 1.2e-15 87.4 196 40.3
Glyma.18G121900 Glycine max HOM05D005097 ORTHO05D006186 1.5e-15 87.0 186 41.9
VMungo0251G1975 Vigna mungo HOM05D005097 ORTHO05D006186 2.0e-15 86.7 186 41.4
Phvul.002G088000 Phaseolus vulgaris HOM05D005097 ORTHO05D006186 2.6e-15 86.3 184 44.6
VMungo1215G0414 Vigna mungo HOM05D005097 ORTHO05D006186 2.6e-15 86.3 185 42.7
TAR371G0839 Trochodendron aralioides HOM05D005097 ORTHO05D006186 3.4e-15 85.9 181 40.3
MD16G1075200 Malus domestica HOM05D005097 ORTHO05D006186 7.6e-15 84.7 153 40.5
Manes.01G187400 Manihot esculenta HOM05D005097 ORTHO05D006186 1.0e-14 84.3 191 42.9
Psat2g121760 Pisum sativum HOM05D005097 ORTHO05D006186 1.3e-14 84.0 189 38.1
PGSC0003DMG400023051 Solanum tuberosum HOM05D005097 ORTHO05D006186 1.7e-14 83.6 186 39.8
CiPaw.05G214900 Carya illinoinensis HOM05D005097 ORTHO05D006186 5.0e-14 82.0 148 51.4
Peaxi162Scf00541g00067 Petunia axillaris HOM05D005097 ORTHO05D006186 5.0e-14 82.0 188 38.3
ClCG05G024410 Citrullus lanatus HOM05D005097 ORTHO05D006186 6.5e-14 81.6 175 41.1
C06p43570 Brassica napus HOM05D005097 ORTHO05D006186 2.5e-13 79.7 203 36.9
DCAR_007146 Daucus carota HOM05D005097 ORTHO05D006186 2.5e-13 79.7 200 36.5
Sed0019373 Sechium edule HOM05D005097 ORTHO05D006186 2.5e-13 79.7 177 37.3
MBI05_g00383_MAGBIO Magnolia biondii HOM05D005097 ORTHO05D006186 3.2e-13 79.3 178 42.7
PGR102G3149 Punica granatum HOM05D005097 ORTHO05D006186 4.2e-13 79.0 135 41.5
BcaB03g14754 Brassica carinata HOM05D005097 ORTHO05D006186 1.6e-12 77.0 189 36.0
BcaC08g46423 Brassica carinata HOM05D005097 ORTHO05D006186 1.6e-12 77.0 193 35.2
A07p36180 Brassica napus HOM05D005097 ORTHO05D006186 2.7e-12 76.3 187 35.3
BolC6t39429H Brassica oleracea HOM05D005097 ORTHO05D006186 2.7e-12 76.3 192 34.4
BraA07t31193Z Brassica rapa HOM05D005097 ORTHO05D006186 2.7e-12 76.3 187 35.3
CARHR025020 Cardamine hirsuta HOM05D005097 ORTHO05D006186 3.5e-12 75.9 183 34.4
Aa31LG7G8220 Aethionema arabicum HOM05D005097 ORTHO05D006186 7.9e-12 74.7 160 39.4
Aqoxy3G03339 Aquilegia oxysepala HOM05D005097 ORTHO05D006186 1.0e-11 74.3 138 46.4
Nitab4.5_0007561g0010 Nicotiana tabacum HOM05D005097 ORTHO05D006186 1.0e-11 74.3 187 39.0
Ah.03g135230 Amaranthus hybridus HOM05D005097 ORTHO05D006186 1.8e-11 73.6 185 40.0
EL10Ac6g13179 Beta vulgaris HOM05D005097 ORTHO05D006186 2.3e-11 73.2 196 34.2
SGA_v2.0_scaffold389G50580 Striga asiatica HOM05D005097 ORTHO05D006186 2.3e-11 73.2 192 34.9
ATR0564G527 Amborella trichopoda HOM05D005097 ORTHO05D006186 3.0e-11 72.8 189 39.7
CiPaw.13G150200 Carya illinoinensis HOM05D005097 ORTHO05D006186 3.0e-11 72.8 65 60.0
A02p16130 Brassica napus HOM05D005097 ORTHO05D006186 3.9e-11 72.4 183 33.9
BraA02t06672Z Brassica rapa HOM05D005097 ORTHO05D006186 3.9e-11 72.4 183 33.9
Dinv16629 Davidia involucrata HOM05D001598 ORTHO05D002757 3.9e-11 72.4 130 40.0
BcaB03g15503 Brassica carinata HOM05D005097 ORTHO05D006186 6.7e-11 71.6 192 34.4
A07p31380 Brassica napus HOM05D005097 ORTHO05D006186 6.7e-11 71.6 193 33.7
BraA07t30773Z Brassica rapa HOM05D005097 ORTHO05D006186 6.7e-11 71.6 193 33.7
C06p36640 Brassica napus HOM05D005097 ORTHO05D006186 8.7e-11 71.2 193 33.2
BcaB05g24483 Brassica carinata HOM05D005097 ORTHO05D006186 1.1e-10 70.9 192 39.6
MD13G1074000 Malus domestica HOM05D005097 ORTHO05D006186 1.1e-10 70.9 139 36.0
PSO063G6767 Papaver somniferum HOM05D005097 ORTHO05D006186 1.1e-10 70.9 158 43.7
Sc04g0008280 Simmondsia chinensis HOM05D005097 ORTHO05D006186 1.1e-10 70.9 179 36.3
BcaC08g45866 Brassica carinata HOM05D005097 ORTHO05D006186 1.5e-10 70.5 193 33.2
BolC6t38773H Brassica oleracea HOM05D005097 ORTHO05D006186 1.5e-10 70.5 193 33.2
CSS0023945 Camellia sinensis var. sinensis HOM05D005097 ORTHO05D006186 1.5e-10 70.5 64 57.8
Sp5g24880 Schrenkiella parvula HOM05D005097 ORTHO05D006186 1.5e-10 70.5 187 39.0
PSO832G2020 Papaver somniferum HOM05D005097 ORTHO05D006186 1.9e-10 70.1 198 40.4
Ah.02g131220 Amaranthus hybridus HOM05D005097 ORTHO05D006186 2.5e-10 69.7 184 38.6
BcaC03g15115 Brassica carinata HOM05D005097 ORTHO05D006186 2.5e-10 69.7 186 37.1
BcaC05g26373 Brassica carinata HOM05D005097 ORTHO05D006186 2.5e-10 69.7 158 32.9
BcaC07g39258 Brassica carinata HOM05D005097 ORTHO05D006186 2.5e-10 69.7 190 33.2
A08p27630 Brassica napus HOM05D005097 ORTHO05D006186 2.5e-10 69.7 187 32.6
A09p40330 Brassica napus HOM05D005097 ORTHO05D006186 2.5e-10 69.7 158 32.9
C08p22680 Brassica napus HOM05D005097 ORTHO05D006186 2.5e-10 69.7 190 33.2
BolC2t08749H Brassica oleracea HOM05D005097 ORTHO05D006186 2.5e-10 69.7 186 37.1
BolC5t31142H Brassica oleracea HOM05D005097 ORTHO05D006186 2.5e-10 69.7 158 32.9
BolC8t49906H Brassica oleracea HOM05D005097 ORTHO05D006186 2.5e-10 69.7 190 33.2
BraA08t34700Z Brassica rapa HOM05D005097 ORTHO05D006186 2.5e-10 69.7 187 32.6
BraA09t39531Z Brassica rapa HOM05D005097 ORTHO05D006186 2.5e-10 69.7 158 32.9
Eucgr.B03425 Eucalyptus grandis HOM05D005097 ORTHO05D006186 2.5e-10 69.7 189 41.3
Lsat_1_v5_gn_4_9981 Lactuca sativa HOM05D005097 ORTHO05D006186 3.3e-10 69.3 97 42.3
THA.LOC104822921 Tarenaya hassleriana HOM05D005097 ORTHO05D006186 3.3e-10 69.3 159 42.1
Aa31LG4G11040 Aethionema arabicum HOM05D005097 ORTHO05D006186 4.3e-10 68.9 67 58.2
CARHR062830 Cardamine hirsuta HOM05D005097 ORTHO05D006186 4.3e-10 68.9 76 56.6
Sp1g21860 Schrenkiella parvula HOM05D005097 ORTHO05D006186 4.3e-10 68.9 188 34.6
AL2G28940 Arabidopsis lyrata HOM05D005097 ORTHO05D006186 1.3e-09 67.4 160 36.2
BcaB03g12015 Brassica carinata HOM05D005097 ORTHO05D006186 1.3e-09 67.4 146 32.2
THA.LOC104822110 Tarenaya hassleriana HOM05D005097 ORTHO05D006186 1.3e-09 67.4 162 41.4
Carub.0002s1644 Capsella rubella HOM05D005097 ORTHO05D006186 2.2e-09 66.6 80 52.5
AT1G26920 Arabidopsis thaliana HOM05D005097 ORTHO05D006186 2.8e-09 66.2 72 56.9
PGR119G1789 Punica granatum HOM05D005097 ORTHO05D006186 3.7e-09 65.9 72 51.4
Carub.0001s2406 Capsella rubella HOM05D005097 ORTHO05D006186 6.3e-09 65.1 181 41.4
Thhalv10008900m.g Eutrema salsugineum HOM05D005097 ORTHO05D006186 6.3e-09 65.1 189 30.7
Nn3g17188 Nelumbo nucifera HOM05D005097 ORTHO05D006186 6.3e-09 65.1 187 39.0
C02p26790 Brassica napus HOM05D005097 ORTHO05D006186 8.2e-09 64.7 183 32.2
Thhalv10019695m.g Eutrema salsugineum HOM05D005097 ORTHO05D006186 8.2e-09 64.7 174 32.2
Actinidia07840 Actinidia chinensis HOM05D005097 ORTHO05D006186 1.1e-08 64.3 65 53.8
AL1G38630 Arabidopsis lyrata HOM05D005097 ORTHO05D006186 1.4e-08 63.9 68 52.9
AT1G69760 Arabidopsis thaliana HOM05D005097 ORTHO05D006186 1.8e-08 63.5 75 52.0
MELO3C012082.2 Cucumis melo HOM05D005097 ORTHO05D006186 3.1e-08 62.8 177 35.0
Eucgr.G02514 Eucalyptus grandis HOM05D005097 ORTHO05D006186 3.1e-08 62.8 173 31.2
Eucgr.G02516 Eucalyptus grandis HOM05D005097 ORTHO05D006186 4.1e-08 62.4 175 38.3
SalBow8G4444 Salvia bowleyana HOM05D005097 ORTHO05D006186 5.3e-08 62.0 189 39.2
unitig_747.g21176 Utricularia gibba HOM05D005097 ORTHO05D006186 6.9e-08 61.6 176 34.7
ECA234G2746 Erigeron canadensis HOM05D005097 ORTHO05D006186 4.5e-07 58.9 71 52.1
DCAR_027404 Daucus carota HOM05D005097 ORTHO05D006186 7.7e-07 58.2 185 31.9


User provided reference genes

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