Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054255.1 Olea europaea HOM05D005610 ORTHO05D006181 8.7e-60 233.4 116 100.0
Oeu052223.1 Olea europaea HOM05D005610 ORTHO05D006181 3.5e-53 211.5 116 91.4
Nitab4.5_0001867g0090 Nicotiana tabacum HOM05D005610 ORTHO05D006181 5.1e-52 207.6 115 87.8
Sopen04g006810 Solanum pennellii HOM05D005610 ORTHO05D006181 8.7e-52 206.8 115 88.7
Peaxi162Scf00442g00523 Petunia axillaris HOM05D005610 ORTHO05D006181 1.1e-51 206.5 115 88.7
Nitab4.5_0001701g0220 Nicotiana tabacum HOM05D005610 ORTHO05D006181 1.5e-51 206.1 115 87.8
Solyc04g014700.4 Solanum lycopersicum HOM05D005610 ORTHO05D006181 1.9e-51 205.7 115 87.8
SGA_v2.0_scaffold4G01884 Striga asiatica HOM05D005610 ORTHO05D006181 1.9e-51 205.7 116 87.1
CAN.G1263.12 Capsicum annuum HOM05D005610 ORTHO05D006181 2.5e-51 205.3 115 87.8
PGSC0003DMG400023560 Solanum tuberosum HOM05D005610 ORTHO05D006181 2.5e-51 205.3 115 87.8
Migut.H01600 Erythranthe guttata HOM05D005610 ORTHO05D006181 3.3e-51 204.9 116 86.2
Cc00_g15270 Coffea canephora HOM05D005610 ORTHO05D006181 4.3e-51 204.5 116 87.9
SalBow8G2682 Salvia bowleyana HOM05D005610 ORTHO05D006181 4.3e-51 204.5 111 90.1
Nitab4.5_0008006g0060 Nicotiana tabacum HOM05D005610 ORTHO05D006181 5.7e-51 204.1 115 87.0
Nitab4.5_0018980g0020 Nicotiana tabacum HOM05D005610 ORTHO05D006181 5.7e-51 204.1 115 87.0
Cc09_g00980 Coffea canephora HOM05D005610 ORTHO05D006181 1.6e-50 202.6 116 87.1
SGA_v2.0_scaffold7G03768 Striga asiatica HOM05D005610 ORTHO05D006181 6.3e-50 200.7 116 84.5
MSTRG.13119 Avicennia marina HOM05D005610 ORTHO05D006181 4.1e-49 198.0 115 85.2
Dinv13959 Davidia involucrata HOM05D005610 ORTHO05D006181 9.0e-49 196.8 116 83.6
QL10p003579 Quercus lobata HOM05D005610 ORTHO05D006181 8.5e-47 190.3 114 81.6
Prupe.8G114900 Prunus persica HOM05D005610 ORTHO05D006181 1.4e-46 189.5 116 77.6
Lj4g0017663 Lotus japonicus HOM05D005610 ORTHO05D006181 5.5e-46 187.6 116 78.4
Lj5g0020791 Lotus japonicus HOM05D005610 ORTHO05D006181 5.5e-46 187.6 116 78.4
Prupe.8G115200 Prunus persica HOM05D005610 ORTHO05D006181 5.5e-46 187.6 116 76.7
CSS0047184 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 7.2e-46 187.2 116 81.0
MD10G1088300 Malus domestica HOM05D005610 ORTHO05D006181 7.2e-46 187.2 116 77.6
Medtr1g023330 Medicago truncatula HOM05D005610 ORTHO05D006181 7.2e-46 187.2 116 78.4
CANSAT01G2220 Cannabis sativa HOM05D005610 ORTHO05D006181 1.2e-45 186.4 114 77.2
Atru.chr1.2482 Acer truncatum HOM05D005610 ORTHO05D006181 1.6e-45 186.0 113 78.8
Ca_13393_v3 Cicer arietinum L. HOM05D005610 ORTHO05D006181 1.6e-45 186.0 114 79.8
arahy.Tifrunner.gnm1.ann1.IYUI89 Arachis hypogaea HOM05D003989 ORTHO05D004626 2.7e-45 185.3 116 77.6
Ciclev10017234m.g Citrus clementina HOM05D005610 ORTHO05D006181 3.6e-45 184.9 109 81.7
arahy.Tifrunner.gnm1.ann1.PD4MQY Arachis hypogaea HOM05D005610 ORTHO05D006181 4.6e-45 184.5 116 77.6
EL10Ac4g08756 Beta vulgaris HOM05D005610 ORTHO05D006181 4.6e-45 184.5 114 78.9
Glyma.19G169600 Glycine max HOM05D005610 ORTHO05D006181 7.9e-45 183.7 116 76.7
Phvul.004G117800 Phaseolus vulgaris HOM05D005610 ORTHO05D006181 7.9e-45 183.7 116 75.9
Actinidia26870 Actinidia chinensis HOM05D005610 ORTHO05D006181 1.0e-44 183.3 116 78.4
MELO3C008876.2 Cucumis melo HOM05D005610 ORTHO05D006181 1.0e-44 183.3 112 77.7
Medtr8g106470 Medicago truncatula HOM05D005610 ORTHO05D006181 1.0e-44 183.3 116 78.4
PGR142G4331 Punica granatum HOM05D005610 ORTHO05D006181 1.0e-44 183.3 116 76.7
ClCG01G011300 Citrullus lanatus HOM05D005610 ORTHO05D006181 1.8e-44 182.6 112 77.7
ClCG07G002910 Citrullus lanatus HOM05D005610 ORTHO05D006181 1.8e-44 182.6 111 78.4
Duzib235G0930 Durio zibethinus HOM05D005610 ORTHO05D006181 1.8e-44 182.6 112 77.7
Thecc.06G231600 Theobroma cacao HOM05D005610 ORTHO05D006181 1.8e-44 182.6 112 77.7
GSVIVG01008189001 Vitis vinifera HOM05D005610 ORTHO05D006181 1.8e-44 182.6 116 75.9
Gohir.A06G152700 Gossypium hirsutum HOM05D005610 ORTHO05D006181 2.3e-44 182.2 112 76.8
Cpa.g.sc152.66 Carica papaya HOM05D005610 ORTHO05D006181 3.0e-44 181.8 111 77.5
COL.COLO4_31865 Corchorus olitorius HOM05D005610 ORTHO05D006181 3.0e-44 181.8 112 77.7
Hund25163 Selenicereus undatus HOM05D005610 ORTHO05D006181 3.0e-44 181.8 112 77.7
Glyma.03G168300 Glycine max HOM05D005610 ORTHO05D006181 3.9e-44 181.4 116 75.0
Haze_06904 Corylus avellana HOM05D005610 ORTHO05D006181 5.1e-44 181.0 111 77.5
CsaV3_4G031690 Cucumis sativus L. HOM05D005610 ORTHO05D006181 5.1e-44 181.0 112 75.9
Lalb_Chr04g0257231 Lupinus albus HOM05D005610 ORTHO05D006181 5.1e-44 181.0 113 77.9
vmacro03652 Vaccinium macrocarpon HOM05D005610 ORTHO05D006181 5.1e-44 181.0 116 75.9
TWI38G1154 Tripterygium wilfordii HOM05D005610 ORTHO05D006181 6.7e-44 180.6 111 79.3
ECA238G1057 Erigeron canadensis HOM05D005610 ORTHO05D006181 8.8e-44 180.3 111 79.3
Thhalv10022365m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 1.1e-43 179.9 116 72.4
Gorai.010G185800 Gossypium raimondii HOM05D005610 ORTHO05D006181 1.1e-43 179.9 112 76.8
Thecc.10G134700 Theobroma cacao HOM05D005610 ORTHO05D006181 1.1e-43 179.9 112 75.0
Carub.0003s0067 Capsella rubella HOM05D005610 ORTHO05D006181 1.5e-43 179.5 116 72.4
Sed0027170 Sechium edule HOM05D005610 ORTHO05D006181 1.5e-43 179.5 109 78.0
unitig_748.g7924 Utricularia gibba HOM05D000772 ORTHO05D006181 1.5e-43 179.5 109 79.8
CARHR075530 Cardamine hirsuta HOM05D005610 ORTHO05D006181 2.5e-43 178.7 111 75.7
Manes.16G001300 Manihot esculenta HOM05D005610 ORTHO05D006181 2.5e-43 178.7 115 76.5
PSO210G2880 Papaver somniferum HOM05D005610 ORTHO05D006181 3.3e-43 178.3 116 75.0
Thecc.10G135500 Theobroma cacao HOM05D005610 ORTHO05D006181 3.3e-43 178.3 112 74.1
TAR624G0514 Trochodendron aralioides HOM05D005610 ORTHO05D006181 3.3e-43 178.3 116 76.7
AUR62034142 Chenopodium quinoa HOM05D005610 ORTHO05D006181 4.3e-43 177.9 111 75.7
FAN15G0825 Fragaria x ananassa HOM05D005610 ORTHO05D006181 4.3e-43 177.9 116 74.1
BcaC09g47662 Brassica carinata HOM05D005610 ORTHO05D006181 5.7e-43 177.6 111 73.0
AUR62014294 Chenopodium quinoa HOM05D005610 ORTHO05D006181 5.7e-43 177.6 114 74.6
AL3G10740 Arabidopsis lyrata HOM05D005610 ORTHO05D006181 7.4e-43 177.2 111 74.8
AT3G01435 Arabidopsis thaliana HOM05D005610 ORTHO05D006181 7.4e-43 177.2 111 73.9
BNapus_Darmor_BZH_scaffold_133p00040 Brassica napus HOM05D005610 ORTHO05D006181 7.4e-43 177.2 111 73.0
BraA01t04664Z Brassica rapa HOM05D005610 ORTHO05D006181 7.4e-43 177.2 111 73.0
Sp3g00630 Schrenkiella parvula HOM05D005610 ORTHO05D006181 7.4e-43 177.2 111 73.0
CiPaw.10G076800 Carya illinoinensis HOM05D005610 ORTHO05D006181 9.7e-43 176.8 114 74.6
RcHm_v2.0_Chr6g0259461 Rosa chinensis HOM05D005610 ORTHO05D006181 9.7e-43 176.8 116 74.1
Aqoxy4G02780 Aquilegia oxysepala HOM05D005610 ORTHO05D006181 1.7e-42 176.0 115 73.9
FvH4_2g07070 Fragaria vesca HOM05D005610 ORTHO05D006181 1.7e-42 176.0 116 73.3
Duzib160G0112 Durio zibethinus HOM05D005610 ORTHO05D006181 2.2e-42 175.6 112 73.2
THA.LOC104822382 Tarenaya hassleriana HOM05D005610 ORTHO05D006181 2.2e-42 175.6 115 72.2
HanXRQChr05g0129341 Helianthus annuus HOM05D005610 ORTHO05D006181 2.8e-42 175.3 116 72.4
PSO302G0046 Papaver somniferum HOM05D005610 ORTHO05D006181 3.7e-42 174.9 111 75.7
Aa31LG5G10530 Aethionema arabicum HOM05D005610 ORTHO05D006181 8.2e-42 173.7 111 73.0
VMungo0464G1641 Vigna mungo HOM05D005610 ORTHO05D006181 1.1e-41 173.3 140 64.3
CDE04G2721 Ceratophyllum demersum HOM05D005610 ORTHO05D006181 5.3e-41 171.0 111 72.1
Lj6g0026774 Lotus japonicus HOM05D005610 ORTHO05D006181 5.3e-41 171.0 111 71.2
Eucgr.B02596 Eucalyptus grandis HOM05D005610 ORTHO05D006181 6.9e-41 170.6 116 69.8
A05p44570 Brassica napus HOM05D005610 ORTHO05D006181 3.4e-40 168.3 111 69.4
BraA05t23199Z Brassica rapa HOM05D005610 ORTHO05D006181 3.4e-40 168.3 111 69.4
Nn8g38603 Nelumbo nucifera HOM05D005610 ORTHO05D006181 3.4e-40 168.3 114 72.8
Thhalv10022907m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 1.7e-39 166.0 131 61.8
Sabra04G0000600 Salix brachista HOM05D005610 ORTHO05D006181 2.9e-39 165.2 108 71.3
Potri.004G001600 Populus trichocarpa HOM05D005610 ORTHO05D006181 6.5e-39 164.1 108 71.3
BolC1t05956H Brassica oleracea HOM05D005610 ORTHO05D006181 8.5e-39 163.7 132 60.6
BolC5t35148H Brassica oleracea HOM05D005610 ORTHO05D006181 5.5e-38 161.0 111 67.6
C09p75160 Brassica napus HOM05D005610 ORTHO05D006181 6.1e-37 157.5 111 66.7
Zm00001eb234830 Zea mays HOM05D005610 ORTHO05D006181 2.3e-36 155.6 109 69.7
Lsat_1_v5_gn_7_13401 Lactuca sativa HOM05D005610 ORTHO05D006181 3.9e-36 154.8 102 71.6
Ah.06g187910 Amaranthus hybridus HOM05D005610 ORTHO05D006181 5.1e-36 154.5 101 73.3
ATR1153G018 Amborella trichopoda HOM05D005610 ORTHO05D006181 1.5e-35 152.9 106 69.8
ATR0723G088 Amborella trichopoda HOM05D005610 ORTHO05D006181 2.2e-34 149.1 106 68.9
HPP92_003728 Vanilla planifolia HOM05D005610 ORTHO05D006181 2.2e-34 149.1 109 62.4
Zm00001eb206370 Zea mays HOM05D005610 ORTHO05D006181 2.6e-32 142.1 103 68.0
Os02g0189100 Oryza sativa ssp. japonica HOM05D005610 ORTHO05D006181 4.5e-32 141.4 109 63.3
CSS0025052 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 1.7e-31 139.4 86 77.9
SEGI_23772 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 2.9e-31 138.7 107 64.5
Psat6g005240 Pisum sativum HOM05D005610 ORTHO05D006181 8.5e-31 137.1 81 84.0
Gohir.D06G159100 Gossypium hirsutum HOM05D005610 ORTHO05D006181 2.5e-30 135.6 82 74.4
MBI19_g29445_MAGBIO Magnolia biondii HOM05D005610 ORTHO05D006181 1.2e-29 133.3 134 54.5
Dinv29757 Davidia involucrata HOM05D005610 ORTHO05D006181 2.7e-29 132.1 74 87.8
FAN24G2055 Fragaria x ananassa HOM05D005610 ORTHO05D006181 1.4e-28 129.8 86 69.8
Pp3c10_18150 Physcomitrium patens HOM05D005610 ORTHO05D006181 5.2e-28 127.9 109 56.0
HanXRQChr15g0470051 Helianthus annuus HOM05D005610 ORTHO05D006181 1.5e-27 126.3 88 70.5
TAR626G0207 Trochodendron aralioides HOM05D005610 ORTHO05D006181 4.4e-27 124.8 179 43.6
Mapoly0014s0199 Marchantia polymorpha HOM05D005610 ORTHO05D006181 9.7e-27 123.6 109 53.2
SMO200G0153 Selaginella moellendorffii HOM05D005610 ORTHO05D006181 2.2e-26 122.5 111 49.5
BNapus_Darmor_BZH_scaffold_119p00050 Brassica napus HOM05D005610 ORTHO05D006181 7.0e-25 117.5 75 74.7
BNapus_Darmor_BZH_scaffold_97p00380 Brassica napus HOM05D005610 ORTHO05D006181 7.0e-25 117.5 75 74.7
Actinidia02323 Actinidia chinensis HOM05D005610 ORTHO05D006181 1.6e-24 116.3 67 79.1
FAN27G3428 Fragaria x ananassa HOM05D005610 ORTHO05D006181 6.5e-23 110.9 76 69.7
Thecc.10G135300 Theobroma cacao HOM05D005610 ORTHO05D006181 6.5e-23 110.9 70 75.7
Zm00001eb004040 Zea mays HOM05D005610 ORTHO05D006181 8.0e-21 104.0 72 65.3
Eucgr.K02585 Eucalyptus grandis HOM05D005610 ORTHO05D006181 1.0e-20 103.6 70 71.4
AagrBONN_evm.TU.Sc2ySwM_228.3334 Anthoceros agrestis HOM05D005610 ORTHO05D006181 3.4e-19 98.6 137 37.2
TPR.G7342 Trifolium pratense HOM05D005610 ORTHO05D006181 1.3e-18 96.7 54 79.6
CBR_g27782 Chara braunii HOM05D005610 ORTHO05D001468 1.7e-18 96.3 112 46.4
FAN20G1916 Fragaria x ananassa HOM05D005610 ORTHO05D006181 2.2e-18 95.9 59 74.6
Pp3c3_34050 Physcomitrium patens HOM05D005610 ORTHO05D006181 2.2e-18 95.9 82 57.3
Rhsim13G0147700 Rhododendron simsii HOM05D005610 ORTHO05D006181 8.3e-18 94.0 58 79.3
Sc16g0007910 Simmondsia chinensis HOM05D005610 ORTHO05D006181 4.5e-16 88.2 54 79.6
RcHm_v2.0_Chr7g0240711 Rosa chinensis HOM05D005610 ORTHO05D006181 8.8e-12 73.9 41 80.5
RcHm_v2.0_Chr7g0240721 Rosa chinensis HOM05D005610 ORTHO05D006181 5.7e-11 71.2 48 70.8
Migut.M01383 Erythranthe guttata HOM05D005610 ORTHO05D006181 1.6e-08 63.2 58 55.2
SEGI_27415 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 7.7e-08 60.8 48 60.4
CARHR125830 Cardamine hirsuta HOM05D005610 ORTHO05D006181 2.5e-06 55.8 38 65.8


User provided reference genes

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