Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu053816.1 Olea europaea HOM05D000117 ORTHO05D009164 4.1e-59 231.1 111 100.0
Oeu045609.2 Olea europaea HOM05D000117 ORTHO05D009164 6.2e-31 137.5 122 59.8
Migut.E00371 Erythranthe guttata HOM05D000117 ORTHO05D009164 5.3e-30 134.4 111 61.3
Dinv31594 Davidia involucrata HOM05D000117 ORTHO05D009164 7.4e-24 114.0 120 52.5
DCAR_023629 Daucus carota HOM05D002719 ORTHO05D002938 2.8e-23 112.1 119 49.6
DCAR_026749 Daucus carota HOM05D000117 ORTHO05D009164 3.7e-23 111.7 120 49.2
Actinidia16685 Actinidia chinensis HOM05D000117 ORTHO05D009164 2.4e-22 109.0 120 49.2
Nitab4.5_0002112g0130 Nicotiana tabacum HOM05D000117 ORTHO05D009164 4.0e-22 108.2 122 50.0
Lj6A753T53 Lonicera japonica HOM05D000117 ORTHO05D009164 5.3e-22 107.8 119 51.3
Actinidia14923 Actinidia chinensis HOM05D000117 ORTHO05D009164 9.0e-22 107.1 120 47.5
Sopen05g004610 Solanum pennellii HOM05D000117 ORTHO05D009164 9.0e-22 107.1 120 48.3
Solyc05g008850.4 Solanum lycopersicum HOM05D000117 ORTHO05D009164 1.5e-21 106.3 120 47.5
Prupe.1G317000 Prunus persica HOM05D000117 ORTHO05D009164 2.6e-21 105.5 116 48.3
CAN.G610.22 Capsicum annuum HOM05D000117 ORTHO05D009164 5.8e-21 104.4 117 52.1
Rhsim09G0103700 Rhododendron simsii HOM05D000117 ORTHO05D009164 2.9e-20 102.1 120 45.8
SGA_v2.0_scaffold4436G54489 Striga asiatica HOM05D000117 ORTHO05D009164 2.9e-20 102.1 117 48.7
Haze_00656 Corylus avellana HOM05D000117 ORTHO05D009164 3.8e-20 101.7 116 50.9
FvH4_4g26700 Fragaria vesca HOM05D000117 ORTHO05D009164 3.8e-20 101.7 117 43.6
FAN17G0021 Fragaria x ananassa HOM05D000117 ORTHO05D009164 8.4e-20 100.5 117 43.6
Potri.010G119900 Populus trichocarpa HOM05D000117 ORTHO05D009164 8.4e-20 100.5 116 47.4
Hma1.2p1_0767F.1_g215520 Hydrangea macrophylla HOM05D000117 ORTHO05D009164 1.1e-19 100.1 116 48.3
RcHm_v2.0_Chr4g0434391 Rosa chinensis HOM05D000117 ORTHO05D009164 1.4e-19 99.8 117 43.6
FAN12G1438 Fragaria x ananassa HOM05D000117 ORTHO05D009164 1.9e-19 99.4 117 42.7
FAN12G1479 Fragaria x ananassa HOM05D000117 ORTHO05D009164 1.9e-19 99.4 117 42.7
Cfa015835 Carpinus fangiana HOM05D000117 ORTHO05D009164 3.2e-19 98.6 72 66.7
HanXRQChr15g0477411 Helianthus annuus HOM05D000117 ORTHO05D009164 3.2e-19 98.6 118 42.4
MD13G1035200 Malus domestica HOM05D000117 ORTHO05D009164 5.5e-19 97.8 116 47.4
QL01p010717 Quercus lobata HOM05D000117 ORTHO05D009164 5.5e-19 97.8 116 45.7
QL01p010790 Quercus lobata HOM05D000117 ORTHO05D009164 5.5e-19 97.8 116 45.7
Lalb_Chr02g0145741 Lupinus albus HOM05D000117 ORTHO05D009164 1.2e-18 96.7 72 61.1
Aa31LG2G8690 Aethionema arabicum HOM05D000117 ORTHO05D009164 1.6e-18 96.3 112 45.5
Cc11_g09650 Coffea canephora HOM05D000117 ORTHO05D009164 1.6e-18 96.3 116 42.2
SalBow8G0779 Salvia bowleyana HOM05D000117 ORTHO05D009164 1.6e-18 96.3 72 61.1
vmacro10601 Vaccinium macrocarpon HOM05D000117 ORTHO05D009164 1.6e-18 96.3 72 63.9
Phvul.007G032200 Phaseolus vulgaris HOM05D000117 ORTHO05D009164 2.7e-18 95.5 72 61.1
VMungo0720G0361 Vigna mungo HOM05D000117 ORTHO05D009164 2.7e-18 95.5 72 61.1
CANSAT01G1048 Cannabis sativa HOM05D000117 ORTHO05D009164 3.5e-18 95.1 122 46.7
Lsat_1_v5_gn_3_62041 Lactuca sativa HOM05D000117 ORTHO05D009164 3.5e-18 95.1 122 41.0
Lj5g0009810 Lotus japonicus HOM05D000117 ORTHO05D009164 4.6e-18 94.7 72 62.5
Lj5g0024280 Lotus japonicus HOM05D000117 ORTHO05D009164 4.6e-18 94.7 72 62.5
Sabra10G0090200 Salix brachista HOM05D000117 ORTHO05D009164 6.0e-18 94.4 116 48.3
Glyma.20G120800 Glycine max HOM05D000117 ORTHO05D009164 7.9e-18 94.0 72 61.1
Manes.14G107100 Manihot esculenta HOM05D000117 ORTHO05D009164 7.9e-18 94.0 72 63.9
GSVIVG01011841001 Vitis vinifera HOM05D000117 ORTHO05D009164 7.9e-18 94.0 72 61.1
Ca_06891_v3 Cicer arietinum L. HOM05D000117 ORTHO05D009164 1.0e-17 93.6 72 62.5
AT1G15050 Arabidopsis thaliana HOM05D000117 ORTHO05D009164 1.3e-17 93.2 80 56.2
arahy.Tifrunner.gnm1.ann1.6B28AS Arachis hypogaea HOM05D000117 ORTHO05D009164 1.3e-17 93.2 72 62.5
arahy.Tifrunner.gnm1.ann1.M3JKN9 Arachis hypogaea HOM05D000117 ORTHO05D009164 1.3e-17 93.2 72 62.5
Cpa.g.sc65.69 Carica papaya HOM05D000117 ORTHO05D009164 1.8e-17 92.8 72 62.5
Ciclev10016885m.g Citrus clementina HOM05D000117 ORTHO05D009164 1.8e-17 92.8 72 63.9
Psat6g224280 Pisum sativum HOM05D000117 ORTHO05D009164 1.8e-17 92.8 72 59.7
Glyma.10G270500 Glycine max HOM05D000117 ORTHO05D009164 3.0e-17 92.0 72 59.7
Medtr1g109510 Medicago truncatula HOM05D000117 ORTHO05D009164 3.0e-17 92.0 100 47.0
TAR622G0867 Trochodendron aralioides HOM05D003094 ORTHO05D009164 3.0e-17 92.0 72 61.1
Atru.chr11.240 Acer truncatum HOM05D000117 ORTHO05D009164 5.1e-17 91.3 71 64.8
TWI31G0022 Tripterygium wilfordii HOM05D000117 ORTHO05D009164 5.1e-17 91.3 72 61.1
MBI16_g44829_MAGBIO Magnolia biondii HOM05D000117 ORTHO05D009164 6.7e-17 90.9 113 41.6
CiPaw.06G016400 Carya illinoinensis HOM05D000117 ORTHO05D009164 8.7e-17 90.5 84 53.6
Eucgr.B02853 Eucalyptus grandis HOM05D000117 ORTHO05D009164 8.7e-17 90.5 114 44.7
TPR.G4942 Trifolium pratense HOM05D000117 ORTHO05D009164 8.7e-17 90.5 72 58.3
CARHR143750 Cardamine hirsuta HOM05D000117 ORTHO05D009164 2.5e-16 89.0 120 43.3
Duzib268G1422 Durio zibethinus HOM05D000117 ORTHO05D009164 2.5e-16 89.0 72 56.9
Ah.03g138450 Amaranthus hybridus HOM05D000117 ORTHO05D009164 3.3e-16 88.6 122 42.6
AL1G27120 Arabidopsis lyrata HOM05D000117 ORTHO05D009164 3.3e-16 88.6 80 52.5
AL5G10150 Arabidopsis lyrata HOM05D000117 ORTHO05D009164 3.3e-16 88.6 76 53.9
PSO478G3861 Papaver somniferum HOM05D000117 ORTHO05D009164 3.3e-16 88.6 118 42.4
AT2G01200 Arabidopsis thaliana HOM05D000117 ORTHO05D009164 5.7e-16 87.8 76 52.6
Aqoxy3G00196 Aquilegia oxysepala HOM05D000117 ORTHO05D009164 7.4e-16 87.4 71 56.3
A06p44570 Brassica napus HOM05D000117 ORTHO05D009164 7.4e-16 87.4 119 40.3
Carub.0005s0018 Capsella rubella HOM05D000117 ORTHO05D009164 9.7e-16 87.0 76 53.9
COL.COLO4_32136 Corchorus olitorius HOM05D000117 ORTHO05D009164 9.7e-16 87.0 118 40.7
AUR62014118 Chenopodium quinoa HOM05D000117 ORTHO05D009164 1.3e-15 86.7 71 59.2
Thhalv10001036m.g Eutrema salsugineum HOM05D000117 ORTHO05D009164 1.3e-15 86.7 76 53.9
PSO017G4083 Papaver somniferum HOM05D000117 ORTHO05D009164 1.3e-15 86.7 72 55.6
Peaxi162Scf00179g00059 Petunia axillaris HOM05D000117 ORTHO05D009164 1.3e-15 86.7 120 45.0
Hund20742 Selenicereus undatus HOM05D000117 ORTHO05D009164 1.6e-15 86.3 72 61.1
BcaC06g34209 Brassica carinata HOM05D000117 ORTHO05D009164 2.2e-15 85.9 115 40.9
C07p31650 Brassica napus HOM05D000117 ORTHO05D009164 2.8e-15 85.5 115 40.9
BolC7t43704H Brassica oleracea HOM05D000117 ORTHO05D009164 2.8e-15 85.5 115 40.9
CARHR015590 Cardamine hirsuta HOM05D000117 ORTHO05D009164 2.8e-15 85.5 71 57.7
MELO3C012276.2 Cucumis melo HOM05D000117 ORTHO05D009164 3.7e-15 85.1 72 56.9
CsaV3_5G034610 Cucumis sativus L. HOM05D000117 ORTHO05D009164 3.7e-15 85.1 72 56.9
AUR62002810 Chenopodium quinoa HOM05D000117 ORTHO05D009164 4.8e-15 84.7 71 57.7
BraA06t27331Z Brassica rapa HOM05D000117 ORTHO05D009164 6.3e-15 84.3 115 40.0
CiPaw.05G242800 Carya illinoinensis HOM05D000117 ORTHO05D009164 8.2e-15 84.0 116 40.5
BcaC06g31325 Brassica carinata HOM05D000117 ORTHO05D009164 1.1e-14 83.6 74 51.4
THA.LOC104805061 Tarenaya hassleriana HOM05D000117 ORTHO05D009164 1.1e-14 83.6 76 53.9
BcaB02g06570 Brassica carinata HOM05D000117 ORTHO05D009164 1.4e-14 83.2 89 49.4
Carub.0001s1482 Capsella rubella HOM05D000117 ORTHO05D009164 1.8e-14 82.8 71 53.5
Sp2g12660 Schrenkiella parvula HOM05D000117 ORTHO05D009164 1.8e-14 82.8 76 52.6
Sed0026108 Sechium edule HOM05D000117 ORTHO05D009164 1.8e-14 82.8 71 54.9
A06p11070 Brassica napus HOM05D000117 ORTHO05D009164 2.4e-14 82.4 69 58.0
C05p13200 Brassica napus HOM05D000117 ORTHO05D009164 2.4e-14 82.4 69 58.0
BolC5t30056H Brassica oleracea HOM05D000117 ORTHO05D009164 2.4e-14 82.4 69 58.0
BraA06t24287Z Brassica rapa HOM05D000117 ORTHO05D009164 2.4e-14 82.4 69 58.0
EL10Ac6g14302 Beta vulgaris HOM05D000117 ORTHO05D009164 2.0e-13 79.3 71 54.9
Gohir.A05G322200 Gossypium hirsutum HOM05D000117 ORTHO05D009164 2.6e-13 79.0 119 39.5
Thecc.02G221700 Theobroma cacao HOM05D000117 ORTHO05D009164 2.6e-13 79.0 117 41.0
Gohir.D05G324300 Gossypium hirsutum HOM05D000117 ORTHO05D009164 4.5e-13 78.2 114 42.1
Gorai.009G348100 Gossypium raimondii HOM05D000117 ORTHO05D009164 2.9e-12 75.5 114 41.2
BcaNung05768 Brassica carinata HOM05D000117 ORTHO05D009164 2.5e-08 62.4 64 43.8
Gohir.A10G107200 Gossypium hirsutum HOM05D000117 ORTHO05D000070 2.4e-06 55.8 93 37.6
Migut.G00572 Erythranthe guttata HOM05D000117 ORTHO05D000070 4.1e-06 55.1 81 40.7
SalBow2G0935 Salvia bowleyana HOM05D000117 ORTHO05D000070 5.3e-06 54.7 81 39.5
ATR0807G082 Amborella trichopoda HOM05D000117 ORTHO05D009164 6.9e-06 54.3 72 43.1


User provided reference genes

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