Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu053017.4 Olea europaea HOM05D004086 ORTHO05D004641 5.4e-133 477.6 238 100.0
Migut.H00181 Erythranthe guttata HOM05D004086 ORTHO05D004641 1.2e-55 220.7 367 41.7
MSTRG.23544 Avicennia marina HOM05D004086 ORTHO05D004641 5.6e-53 211.8 379 39.3
Oeu053007.1 Olea europaea HOM05D004086 ORTHO05D004641 3.6e-52 209.1 258 53.5
Cc07_g09240 Coffea canephora HOM05D004086 ORTHO05D004641 3.7e-49 199.1 375 36.5
Nitab4.5_0008457g0010 Nicotiana tabacum HOM05D004086 ORTHO05D004641 1.0e-46 191.0 375 37.1
Dinv39963 Davidia involucrata HOM05D004086 ORTHO05D004641 6.6e-46 188.3 376 36.4
Nitab4.5_0001279g0090 Nicotiana tabacum HOM05D004086 ORTHO05D004641 8.6e-46 188.0 372 37.1
CSS0022456 Camellia sinensis var. sinensis HOM05D004086 ORTHO05D004641 1.2e-44 184.1 375 35.5
CSS0048181 Camellia sinensis var. sinensis HOM05D004086 ORTHO05D004641 1.2e-44 184.1 375 35.5
Hma1.2p1_0400F.1_g144650 Hydrangea macrophylla HOM05D004086 ORTHO05D004641 6.2e-44 181.8 363 35.0
Nitab4.5_0010593g0010 Nicotiana tabacum HOM05D004086 ORTHO05D004641 4.9e-41 172.2 425 32.5
Oeu053005.1 Olea europaea HOM05D004086 ORTHO05D004641 6.4e-41 171.8 103 83.5
Actinidia36545 Actinidia chinensis HOM05D004086 ORTHO05D004641 1.9e-40 170.2 377 33.7
Actinidia12113 Actinidia chinensis HOM05D004086 ORTHO05D004641 2.3e-38 163.3 377 33.2
Peaxi162Scf00515g00225 Petunia axillaris HOM05D004086 ORTHO05D004641 2.3e-38 163.3 365 34.5
PGSC0003DMG400004762 Solanum tuberosum HOM05D004086 ORTHO05D004641 4.3e-37 159.1 374 32.9
Manes.07G068600 Manihot esculenta HOM05D004086 ORTHO05D004641 9.5e-37 157.9 380 32.1
Sopen08g027080 Solanum pennellii HOM05D004086 ORTHO05D004641 9.5e-37 157.9 375 32.3
Solyc08g078600.3 Solanum lycopersicum HOM05D004086 ORTHO05D004641 1.2e-36 157.5 374 32.4
CAN.G1058.29 Capsicum annuum HOM05D004086 ORTHO05D004641 1.6e-36 157.1 373 34.0
Potri.007G028600 Populus trichocarpa HOM05D004086 ORTHO05D004641 3.6e-36 156.0 358 32.4
CAN.G358.119 Capsicum annuum HOM05D004086 ORTHO05D004641 4.0e-35 152.5 321 35.8
TWI09G1017 Tripterygium wilfordii HOM05D004086 ORTHO05D004641 5.2e-35 152.1 378 30.7
Sabra07G0024800 Salix brachista HOM05D004086 ORTHO05D004641 3.4e-34 149.4 380 30.5
TAR628G1622 Trochodendron aralioides HOM05D004086 ORTHO05D004641 3.4e-34 149.4 376 33.0
MELO3C017544.2 Cucumis melo HOM05D004086 ORTHO05D004641 7.6e-34 148.3 375 32.0
DCAR_025930 Daucus carota HOM05D004086 ORTHO05D004641 9.9e-34 147.9 378 32.0
vmacro07910 Vaccinium macrocarpon HOM05D004086 ORTHO05D004641 2.2e-33 146.7 391 30.7
CsaV3_4G005180 Cucumis sativus L. HOM05D004086 ORTHO05D004641 6.4e-33 145.2 375 30.9
Lj5A533G14 Lonicera japonica HOM05D004086 ORTHO05D004641 6.4e-33 145.2 379 33.0
ClCG07G009030 Citrullus lanatus HOM05D004086 ORTHO05D004641 2.1e-31 140.2 373 30.6
Nn5g29538 Nelumbo nucifera HOM05D004086 ORTHO05D004641 2.7e-31 139.8 375 31.7
GSVIVG01018995001 Vitis vinifera HOM05D004086 ORTHO05D004641 7.8e-31 138.3 383 32.6
CANSAT01G2856 Cannabis sativa HOM05D004086 ORTHO05D004641 3.0e-30 136.3 374 31.0
QL06p045466 Quercus lobata HOM05D004086 ORTHO05D004641 5.1e-30 135.6 375 30.9
Sopen02g030230 Solanum pennellii HOM05D004086 ORTHO05D004641 2.5e-29 133.3 364 31.9
Solyc02g085560.3 Solanum lycopersicum HOM05D004086 ORTHO05D004641 5.6e-29 132.1 364 31.6
ECA232G4057 Erigeron canadensis HOM05D004086 ORTHO05D001499 7.3e-29 131.7 366 30.3
ECA238G3830 Erigeron canadensis HOM05D004086 ORTHO05D004641 3.6e-28 129.4 366 31.1
unitig_52.g17585 Utricularia gibba HOM05D004086 ORTHO05D004641 3.6e-28 129.4 369 29.8
Sed0023254 Sechium edule HOM05D004086 ORTHO05D004641 8.1e-28 128.3 377 29.7
Duzib264G0994 Durio zibethinus HOM05D004086 ORTHO05D004641 2.4e-27 126.7 374 29.7
AUR62008836 Chenopodium quinoa HOM05D004086 ORTHO05D004641 4.0e-27 125.9 369 29.5
Hund05506 Selenicereus undatus HOM05D004086 ORTHO05D004641 2.0e-26 123.6 371 29.6
Rhsim03G0093700 Rhododendron simsii HOM05D004086 ORTHO05D004641 2.6e-26 123.2 112 60.7
Ah.15g091580 Amaranthus hybridus HOM05D004086 ORTHO05D004641 7.6e-26 121.7 349 30.4
Medtr5g019810 Medicago truncatula HOM05D004086 ORTHO05D004641 9.9e-26 121.3 380 27.9
Thecc.01G039100 Theobroma cacao HOM05D004086 ORTHO05D004641 1.1e-24 117.9 374 29.4
Haze_15127 Corylus avellana HOM05D004086 ORTHO05D004641 2.4e-24 116.7 360 30.0
Ca_00390_v3 Cicer arietinum L. HOM05D004086 ORTHO05D004641 5.4e-24 115.5 383 27.7
Ciclev10025048m.g Citrus clementina HOM05D004086 ORTHO05D004641 5.4e-24 115.5 376 29.0
Nitab4.5_0004445g0020 Nicotiana tabacum HOM05D004086 ORTHO05D004641 7.1e-24 115.2 103 58.3
COL.COLO4_22111 Corchorus olitorius HOM05D004086 ORTHO05D004641 1.2e-23 114.4 374 28.3
Lalb_Chr20g0123501 Lupinus albus HOM05D004086 ORTHO05D004641 4.6e-23 112.5 388 27.6
DCAR_023357 Daucus carota HOM05D004086 ORTHO05D004641 6.0e-23 112.1 355 29.9
HanXRQChr09g0262111 Helianthus annuus HOM05D004086 ORTHO05D004641 6.0e-23 112.1 372 27.7
Haze_02099 Corylus avellana HOM05D004086 ORTHO05D004641 1.0e-22 111.3 360 29.4
Phvul.002G040400 Phaseolus vulgaris HOM05D004086 ORTHO05D004641 2.3e-22 110.2 387 28.2
TPR.G18816 Trifolium pratense HOM05D004086 ORTHO05D004641 8.7e-22 108.2 382 27.0
EL10Ac7g17738 Beta vulgaris HOM05D004086 ORTHO05D004641 1.1e-21 107.8 372 27.4
Cpa.g.sc353.3 Carica papaya HOM05D004086 ORTHO05D004641 1.5e-21 107.5 112 52.7
Glyma.11G009900 Glycine max HOM05D004086 ORTHO05D004641 1.9e-21 107.1 388 27.8
C07p39950 Brassica napus HOM05D004086 ORTHO05D004641 3.3e-21 106.3 385 25.5
BolC7t44527H Brassica oleracea HOM05D004086 ORTHO05D004641 4.3e-21 105.9 385 25.2
Lj5g0019705 Lotus japonicus HOM05D004086 ORTHO05D004641 4.3e-21 105.9 391 28.4
VMungo1215G0116 Vigna mungo HOM05D004086 ORTHO05D004641 5.6e-21 105.5 387 26.4
CiPaw.02G015600 Carya illinoinensis HOM05D004086 ORTHO05D004641 1.3e-20 104.4 106 50.9
Thhalv10003751m.g Eutrema salsugineum HOM05D004086 ORTHO05D004641 1.6e-20 104.0 379 25.9
A06p38290 Brassica napus HOM05D004086 ORTHO05D004641 2.1e-20 103.6 385 26.0
BraA06t26744Z Brassica rapa HOM05D004086 ORTHO05D004641 2.1e-20 103.6 385 26.0
AUR62025406 Chenopodium quinoa HOM05D004086 ORTHO05D004641 2.8e-20 103.2 330 28.2
Gohir.D11G227900 Gossypium hirsutum HOM05D004086 ORTHO05D004641 3.6e-20 102.8 336 29.5
THA.LOC104819797 Tarenaya hassleriana HOM05D004086 ORTHO05D004641 3.6e-20 102.8 378 26.2
Eucgr.H01260 Eucalyptus grandis HOM05D004086 ORTHO05D004641 6.2e-20 102.1 111 50.5
Oeu014919.1 Olea europaea HOM05D004086 ORTHO05D004641 6.2e-20 102.1 94 60.6
Sp2g19840 Schrenkiella parvula HOM05D004086 ORTHO05D004641 8.1e-20 101.7 379 25.6
Carub.0008s0941 Capsella rubella HOM05D004086 ORTHO05D004641 1.1e-19 101.3 384 25.3
Lsat_1_v5_gn_4_150860 Lactuca sativa HOM05D004086 ORTHO05D004641 2.4e-19 100.1 114 49.1
COL.COLO4_14865 Corchorus olitorius HOM05D004086 ORTHO05D004641 3.1e-19 99.8 105 51.4
Prupe.7G151600 Prunus persica HOM05D004086 ORTHO05D004641 5.3e-19 99.0 382 27.7
AL8G23320 Arabidopsis lyrata HOM05D004086 ORTHO05D004641 6.9e-19 98.6 381 26.0
AT5G49530 Arabidopsis thaliana HOM05D004086 ORTHO05D004641 9.0e-19 98.2 381 24.9
Gohir.D11G192200 Gossypium hirsutum HOM05D004086 ORTHO05D004641 1.2e-18 97.8 375 27.5
Gorai.007G205200 Gossypium raimondii HOM05D004086 ORTHO05D004641 1.2e-18 97.8 375 27.5
Gohir.D11G227980 Gossypium hirsutum HOM05D004086 ORTHO05D004641 1.5e-18 97.4 375 27.2
CARHR287960 Cardamine hirsuta HOM05D004086 ORTHO05D004641 4.5e-18 95.9 382 27.2
CDE05G2435 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 5.8e-18 95.5 358 27.9
PGSC0003DMG400012686 Solanum tuberosum HOM05D004086 ORTHO05D004641 5.8e-18 95.5 103 50.5
Ah.15g091670 Amaranthus hybridus HOM05D004086 ORTHO05D004641 1.3e-17 94.4 101 50.5
Gohir.A11G185700 Gossypium hirsutum HOM05D004086 ORTHO05D004641 1.3e-17 94.4 375 26.9
PSO675G7346 Papaver somniferum HOM05D004086 ORTHO05D004641 1.7e-17 94.0 371 25.3
PSO541G3560 Papaver somniferum HOM05D004086 ORTHO05D004641 3.8e-17 92.8 371 25.3
Psat2g160960 Pisum sativum HOM05D004086 ORTHO05D004641 3.2e-16 89.7 103 43.7
MD02G1151400 Malus domestica HOM05D004086 ORTHO05D004641 9.3e-16 88.2 114 45.6
Lj4A239T53 Lonicera japonica HOM05D004086 ORTHO05D004641 2.1e-15 87.0 112 42.9
Atru.chr3.545 Acer truncatum HOM05D004086 ORTHO05D004641 3.5e-15 86.3 103 45.6
TPR.G28496 Trifolium pratense HOM05D004086 ORTHO05D004641 3.5e-15 86.3 105 43.8
SpUn0021_0010 Schrenkiella parvula HOM05D004086 ORTHO05D004641 6.0e-15 85.5 106 44.3
Sc17g0002710 Simmondsia chinensis HOM05D004086 ORTHO05D004641 6.0e-15 85.5 114 40.4
Medtr5g026040 Medicago truncatula HOM05D004086 ORTHO05D004641 7.9e-15 85.1 103 44.7
Aqoxy6G01048 Aquilegia oxysepala HOM05D004086 ORTHO05D004641 3.0e-14 83.2 105 46.7
HPP92_015988 Vanilla planifolia HOM05D004086 ORTHO05D004641 3.3e-13 79.7 100 47.0
CDE10G1264 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 5.6e-13 79.0 272 29.0
Lsat_1_v5_gn_4_150881 Lactuca sativa HOM05D004086 ORTHO05D004641 4.8e-12 75.9 74 51.4
RcHm_v2.0_Chr2g0102021 Rosa chinensis HOM05D004086 ORTHO05D004641 4.8e-12 75.9 118 40.7
arahy.Tifrunner.gnm1.ann1.FS5W7P Arachis hypogaea HOM05D004086 ORTHO05D004641 8.1e-12 75.1 106 39.6
AL5G27650 Arabidopsis lyrata HOM05D004086 ORTHO05D004641 1.8e-11 73.9 106 40.6
ATR0064G058 Amborella trichopoda HOM05D004086 ORTHO05D004641 3.1e-11 73.2 109 40.4
Mapoly0113s0019 Marchantia polymorpha HOM05D004086 ORTHO05D004641 3.1e-11 73.2 116 41.4
FvH4_1g13700 Fragaria vesca HOM05D004086 ORTHO05D004641 4.0e-11 72.8 118 39.0
Aa31LG11G8330 Aethionema arabicum HOM05D004086 ORTHO05D004641 6.9e-11 72.0 118 39.8
FAN28G1508 Fragaria x ananassa HOM05D004086 ORTHO05D004641 6.9e-11 72.0 114 39.5
Thhalv10023969m.g Eutrema salsugineum HOM05D004086 ORTHO05D004641 9.0e-11 71.6 112 40.2
FAN19G3131 Fragaria x ananassa HOM05D004086 ORTHO05D004641 1.2e-10 71.2 118 38.1
FAN26G0470 Fragaria x ananassa HOM05D004086 ORTHO05D004641 1.2e-10 71.2 118 38.1
CARHR050710 Cardamine hirsuta HOM05D004086 ORTHO05D004641 1.5e-10 70.9 98 40.8
FAN23G2825 Fragaria x ananassa HOM05D004086 ORTHO05D004641 2.6e-10 70.1 118 38.1
CBR_g22032 Chara braunii HOM05D004086 ORTHO05D004641 4.5e-10 69.3 120 41.7
Ca_29956_v3 Cicer arietinum L. HOM05D004086 ORTHO05D004641 4.5e-10 69.3 103 42.7
CBR_g50911 Chara braunii HOM05D004086 ORTHO05D004641 5.8e-10 68.9 120 41.7
CBR_g50913 Chara braunii HOM05D004086 ORTHO05D004641 5.8e-10 68.9 120 41.7
Sc17g0002700 Simmondsia chinensis HOM05D004086 ORTHO05D004641 7.6e-10 68.6 80 41.2
CDE10G0017 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 2.2e-09 67.0 127 38.6
Ca_29955_v3 Cicer arietinum L. HOM05D004086 ORTHO05D004641 8.4e-09 65.1 178 29.8
arahy.Tifrunner.gnm1.ann1.4T6GLU Arachis hypogaea HOM05D004086 ORTHO05D004641 3.5e-07 59.7 119 37.8
AagrBONN_evm.TU.Sc2ySwM_344.3508 Anthoceros agrestis HOM05D004086 ORTHO05D004641 1.8e-06 57.4 117 35.0
HPP92_026151 Vanilla planifolia HOM05D004086 ORTHO05D004641 1.8e-06 57.4 104 38.5
SEGI_33702 Sequoiadendron giganteum HOM05D004086 ORTHO05D004641 3.0e-06 56.6 121 33.9
HPP92_026150 Vanilla planifolia HOM05D004086 ORTHO05D004641 5.1e-06 55.8 81 42.0


User provided reference genes

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