Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052240.1 Olea europaea HOM05D004186 ORTHO05D006965 4.5e-277 957.2 457 100.0
Oeu054233.2 Olea europaea HOM05D004186 ORTHO05D006965 1.4e-217 759.6 482 79.3
Migut.K00260 Erythranthe guttata HOM05D004186 ORTHO05D006965 9.3e-206 720.3 482 74.5
Manes.06G027600 Manihot esculenta HOM05D004186 ORTHO05D006965 9.3e-206 720.3 482 74.5
Dinv42759 Davidia involucrata HOM05D004186 ORTHO05D006965 7.8e-205 717.2 483 74.3
Dinv43343 Davidia involucrata HOM05D004186 ORTHO05D006965 7.8e-205 717.2 483 74.3
Migut.J01448 Erythranthe guttata HOM05D004186 ORTHO05D006965 1.5e-203 713.0 482 74.1
SGA_v2.0_scaffold69G23283 Striga asiatica HOM05D004186 ORTHO05D006965 1.3e-202 709.9 481 73.4
TAR636G1430 Trochodendron aralioides HOM05D004186 ORTHO05D006965 1.6e-202 709.5 483 72.9
Cc06_g13640 Coffea canephora HOM05D004186 ORTHO05D006965 3.6e-202 708.4 482 72.8
TAR625G0733 Trochodendron aralioides HOM05D004186 ORTHO05D006965 4.8e-202 708.0 483 72.7
Potri.018G096049 Populus trichocarpa HOM05D004186 ORTHO05D006965 1.4e-201 706.4 482 72.8
SalBow6G3740 Salvia bowleyana HOM05D004186 ORTHO05D006965 2.4e-201 705.7 488 72.5
CiPaw.08G037900 Carya illinoinensis HOM05D004186 ORTHO05D006965 4.0e-201 704.9 483 72.5
ECA236G4107 Erigeron canadensis HOM05D004186 ORTHO05D006965 6.9e-201 704.1 483 72.7
GSVIVG01029114001 Vitis vinifera HOM05D004186 ORTHO05D006965 3.4e-200 701.8 483 72.7
CSS0041373 Camellia sinensis var. sinensis HOM05D004186 ORTHO05D006965 5.8e-200 701.0 482 72.6
Hma1.2p1_1261F.1_g271200 Hydrangea macrophylla HOM05D004186 ORTHO05D006965 7.1e-198 694.1 484 72.9
Sopen07g002760 Solanum pennellii HOM05D004186 ORTHO05D006965 9.3e-198 693.7 479 71.8
Solyc07g006650.4 Solanum lycopersicum HOM05D004186 ORTHO05D006965 2.1e-197 692.6 479 71.6
Thecc.10G167400 Theobroma cacao HOM05D004186 ORTHO05D006965 2.1e-197 692.6 480 72.1
Lsat_1_v5_gn_8_66460 Lactuca sativa HOM05D004186 ORTHO05D006965 2.7e-197 692.2 482 71.0
MSTRG.19694 Avicennia marina HOM05D004186 ORTHO05D006965 4.6e-197 691.4 482 71.4
Duzib034G0005 Durio zibethinus HOM05D004186 ORTHO05D006965 6.0e-197 691.0 480 72.1
RcHm_v2.0_Chr4g0403601 Rosa chinensis HOM05D004186 ORTHO05D006965 6.0e-197 691.0 475 72.8
Prupe.1G091900 Prunus persica HOM05D004186 ORTHO05D006965 1.3e-196 689.9 484 71.9
TWI32G0580 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 1.3e-196 689.9 482 72.0
HanXRQChr05g0136751 Helianthus annuus HOM05D004186 ORTHO05D006965 8.7e-196 687.2 486 70.8
Duzib114G0309 Durio zibethinus HOM05D004186 ORTHO05D006965 1.5e-195 686.4 480 71.7
PSO063G2639 Papaver somniferum HOM05D004186 ORTHO05D006965 1.5e-195 686.4 482 71.0
DCAR_017956 Daucus carota HOM05D004186 ORTHO05D006965 1.9e-195 686.0 482 70.3
Duzib128G0608 Durio zibethinus HOM05D004186 ORTHO05D006965 1.9e-195 686.0 480 71.2
MD16G1265900 Malus domestica HOM05D004186 ORTHO05D006965 1.9e-195 686.0 484 70.7
Manes.02G134800 Manihot esculenta HOM05D004186 ORTHO05D006965 3.3e-195 685.3 482 71.2
Sed0027081 Sechium edule HOM05D004186 ORTHO05D006965 4.3e-195 684.9 482 70.3
QL02p096850 Quercus lobata HOM05D004186 ORTHO05D006965 7.4e-195 684.1 482 71.4
RhsimUnG0079700 Rhododendron simsii HOM05D004186 ORTHO05D006965 9.6e-195 683.7 489 69.7
PGSC0003DMG400027477 Solanum tuberosum HOM05D004186 ORTHO05D006965 1.3e-194 683.3 479 71.0
FvH4_4g32520 Fragaria vesca HOM05D004186 ORTHO05D006965 2.1e-194 682.6 475 71.6
CANSAT11G0657 Cannabis sativa HOM05D004186 ORTHO05D006965 6.2e-194 681.0 482 70.3
Actinidia04122 Actinidia chinensis HOM05D004186 ORTHO05D006965 1.8e-193 679.5 483 70.2
Gorai.009G296100 Gossypium raimondii HOM05D004186 ORTHO05D006965 1.8e-193 679.5 480 70.2
FAN12G1387 Fragaria x ananassa HOM05D004186 ORTHO05D006965 2.4e-193 679.1 479 71.4
Gohir.A05G280700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 2.4e-193 679.1 480 70.0
CiPaw.07G189100 Carya illinoinensis HOM05D004186 ORTHO05D006965 5.3e-193 677.9 472 71.6
ClCG11G012460 Citrullus lanatus HOM05D004186 ORTHO05D006965 1.2e-192 676.8 482 69.7
Cpa.g.sc75.2 Carica papaya HOM05D004186 ORTHO05D006965 2.0e-192 676.0 482 69.5
CsaV3_2G008080 Cucumis sativus L. HOM05D004186 ORTHO05D006965 3.4e-192 675.2 482 69.7
Gohir.D05G282700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 3.4e-192 675.2 479 69.9
Peaxi162Scf00942g00127 Petunia axillaris HOM05D004186 ORTHO05D006965 4.5e-192 674.9 481 71.5
Eucgr.G01193 Eucalyptus grandis HOM05D004186 ORTHO05D006965 1.3e-191 673.3 498 68.5
Lj9A689G39 Lonicera japonica HOM05D004186 ORTHO05D006965 2.2e-191 672.5 465 72.3
PSO782G1691 Papaver somniferum HOM05D004186 ORTHO05D006965 2.2e-191 672.5 482 70.3
Rhsim01G0008400 Rhododendron simsii HOM05D004186 ORTHO05D006965 3.8e-191 671.8 486 70.0
COL.COLO4_09973 Corchorus olitorius HOM05D004186 ORTHO05D006965 4.9e-191 671.4 484 70.2
Nitab4.5_0001212g0070 Nicotiana tabacum HOM05D004186 ORTHO05D006965 6.4e-191 671.0 448 74.3
Cpa.g.sc95.75 Carica papaya HOM05D004186 ORTHO05D006965 8.4e-191 670.6 482 69.5
MELO3C004075.2 Cucumis melo HOM05D004186 ORTHO05D006965 8.4e-191 670.6 482 68.9
Ciclev10008154m.g Citrus clementina HOM05D004186 ORTHO05D006965 1.1e-190 670.2 482 68.9
Atru.chr7.741 Acer truncatum HOM05D004186 ORTHO05D006965 1.9e-190 669.5 482 69.7
Lj4g0000380 Lotus japonicus HOM05D004186 ORTHO05D006965 4.2e-190 668.3 483 70.4
Sc08g0005470 Simmondsia chinensis HOM05D004186 ORTHO05D006965 5.5e-190 667.9 482 69.1
CDE04G0897 Ceratophyllum demersum HOM05D004186 ORTHO05D006965 2.7e-189 665.6 479 69.1
ATR0580G261 Amborella trichopoda HOM05D004186 ORTHO05D006965 4.6e-189 664.8 483 68.5
CAN.G584.24 Capsicum annuum HOM05D004186 ORTHO05D006965 4.6e-189 664.8 480 70.2
Lalb_Chr11g0072331 Lupinus albus HOM05D004186 ORTHO05D006965 4.6e-189 664.8 483 69.6
Thhalv10013406m.g Eutrema salsugineum HOM05D004186 ORTHO05D006965 1.8e-188 662.9 483 68.3
Ca_21198_v3 Cicer arietinum L. HOM05D004186 ORTHO05D006965 2.3e-188 662.5 483 70.0
EL10Ac8g18262 Beta vulgaris HOM05D004186 ORTHO05D006965 3.0e-188 662.1 471 70.1
Medtr4g128840 Medicago truncatula HOM05D004186 ORTHO05D006965 3.9e-188 661.8 483 69.2
Nitab4.5_0000244g0180 Nicotiana tabacum HOM05D004186 ORTHO05D006965 5.1e-188 661.4 443 74.0
TPR.G5301 Trifolium pratense HOM05D004186 ORTHO05D006965 8.7e-188 660.6 483 69.2
Glyma.17G066200 Glycine max HOM05D004186 ORTHO05D006965 3.3e-187 658.7 484 70.2
Sp6g19340 Schrenkiella parvula HOM05D004186 ORTHO05D006965 3.3e-187 658.7 483 68.5
VMungo1215G1034 Vigna mungo HOM05D004186 ORTHO05D006965 5.6e-187 657.9 483 69.8
AUR62039990 Chenopodium quinoa HOM05D004186 ORTHO05D006965 9.6e-187 657.1 471 69.9
arahy.Tifrunner.gnm1.ann1.CAM23Q Arachis hypogaea HOM05D004186 ORTHO05D006965 1.3e-186 656.8 483 69.4
AUR62040296 Chenopodium quinoa HOM05D004186 ORTHO05D006965 1.6e-186 656.4 471 69.6
FAN22G1241 Fragaria x ananassa HOM05D004186 ORTHO05D006965 1.8e-185 652.9 498 67.9
C09p49530 Brassica napus HOM05D004186 ORTHO05D006965 3.1e-185 652.1 483 67.9
Phvul.003G148700 Phaseolus vulgaris HOM05D004186 ORTHO05D006965 4.0e-185 651.7 483 69.6
BcaC04g19942 Brassica carinata HOM05D004186 ORTHO05D006965 9.0e-185 650.6 483 67.7
AL8G33680 Arabidopsis lyrata HOM05D004186 ORTHO05D006965 1.2e-184 650.2 473 68.5
AT5G57655 Arabidopsis thaliana HOM05D004186 ORTHO05D006965 1.5e-184 649.8 483 67.3
CARHR271410 Cardamine hirsuta HOM05D004186 ORTHO05D006965 1.5e-184 649.8 483 67.3
HPP92_013702 Vanilla planifolia HOM05D004186 ORTHO05D006965 1.5e-184 649.8 479 68.7
BolC9t57806H Brassica oleracea HOM05D004186 ORTHO05D006965 3.4e-184 648.7 491 66.8
BraA10t43588Z Brassica rapa HOM05D004186 ORTHO05D006965 4.5e-184 648.3 473 68.3
Carub.0008s1816 Capsella rubella HOM05D004186 ORTHO05D006965 1.7e-183 646.4 483 67.5
A10p15060 Brassica napus HOM05D004186 ORTHO05D006965 2.9e-183 645.6 473 67.9
THA.LOC104813530 Tarenaya hassleriana HOM05D004186 ORTHO05D006965 3.8e-183 645.2 483 67.3
BcaB08g36123 Brassica carinata HOM05D004186 ORTHO05D006965 8.4e-183 644.0 473 67.9
Psat0ss9363g0320 Pisum sativum HOM05D004186 ORTHO05D006965 1.4e-182 643.3 461 70.3
Ah.14g083970 Amaranthus hybridus HOM05D004186 ORTHO05D006965 3.2e-182 642.1 487 67.6
FAN07G2198 Fragaria x ananassa HOM05D004186 ORTHO05D006965 5.7e-179 631.3 501 65.5
Os07g0669100 Oryza sativa ssp. japonica HOM05D004186 ORTHO05D006965 9.6e-179 630.6 474 66.7
Zm00001eb111020 Zea mays HOM05D004186 ORTHO05D006965 1.3e-178 630.2 458 67.9
Aa31LG3G13490 Aethionema arabicum HOM05D004186 ORTHO05D006965 1.6e-178 629.8 481 66.1
Zm00001eb330180 Zea mays HOM05D004186 ORTHO05D006965 2.8e-178 629.0 463 67.2
arahy.Tifrunner.gnm1.ann1.YY53PU Arachis hypogaea HOM05D004186 ORTHO05D006965 1.8e-177 626.3 504 65.1
MBI14_g39543_MAGBIO Magnolia biondii HOM05D004186 ORTHO05D006965 2.0e-176 622.9 472 66.5
Hund26412 Selenicereus undatus HOM05D004186 ORTHO05D006965 7.6e-176 620.9 457 68.5
Gohir.A06G175800 Gossypium hirsutum HOM05D004186 ORTHO05D006965 8.5e-175 617.5 480 64.6
Haze_22131 Corylus avellana HOM05D004186 ORTHO05D006965 5.1e-172 608.2 510 63.5
Nn2g12639 Nelumbo nucifera HOM05D004186 ORTHO05D006965 1.3e-170 603.6 449 68.4
arahy.Tifrunner.gnm1.ann1.WFV6V5 Arachis hypogaea HOM05D004186 ORTHO05D006965 1.4e-164 583.6 483 63.4
arahy.Tifrunner.gnm1.ann1.QC9P0E Arachis hypogaea HOM05D004186 ORTHO05D006965 8.8e-164 580.9 483 62.7
Dinv41278 Davidia involucrata HOM05D004186 ORTHO05D006965 3.8e-159 565.5 390 71.3
Mapoly0030s0071 Marchantia polymorpha HOM05D004186 ORTHO05D006965 1.2e-157 560.5 441 62.8
vmacro13097 Vaccinium macrocarpon HOM05D004186 ORTHO05D006965 1.6e-157 560.1 502 60.4
AagrBONN_evm.TU.Sc2ySwM_228.4505 Anthoceros agrestis HOM05D004186 ORTHO05D006965 3.9e-156 555.4 447 62.9
Pp3c6_6020 Physcomitrium patens HOM05D004186 ORTHO05D006965 3.9e-156 555.4 457 60.8
SMO259G0020 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 7.4e-155 551.2 445 61.3
unitig_26.g9078 Utricularia gibba HOM05D004186 ORTHO05D006965 6.3e-146 521.5 471 59.2
Gohir.D06G185466 Gossypium hirsutum HOM05D004186 ORTHO05D006965 1.8e-129 466.8 375 62.1
Gorai.010G217000 Gossypium raimondii HOM05D004186 ORTHO05D006965 2.7e-128 463.0 375 62.1
Hund09010 Selenicereus undatus HOM05D004186 ORTHO05D006965 7.3e-126 454.9 336 68.8
Aqoxy7G03142 Aquilegia oxysepala HOM05D004186 ORTHO05D006965 3.3e-118 429.5 483 51.3
SalBow6G1169 Salvia bowleyana HOM05D004186 ORTHO05D006965 3.7e-114 416.0 343 65.0
arahy.Tifrunner.gnm1.ann1.6S67WQ Arachis hypogaea HOM05D004186 ORTHO05D006965 1.2e-109 401.0 275 72.0
arahy.Tifrunner.gnm1.ann1.LBE3WY Arachis hypogaea HOM05D004186 ORTHO05D006965 6.2e-109 398.7 267 73.4
MCO08G279 Micromonas commoda HOM05D004186 ORTHO05D006965 7.1e-105 385.2 409 51.1
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 5.1e-103 379.0 305 62.6
TWI34G1113 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 1.2e-99 367.9 208 84.1
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 2.0e-99 367.1 305 62.0
PRCOL_00002845 Prasinoderma coloniale HOM05D004186 ORTHO05D006965 3.0e-95 353.2 469 41.6
SEGI_15575 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 6.6e-95 352.1 246 67.9
SEGI_36533 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 6.6e-95 352.1 246 67.9
BcaC03g14138 Brassica carinata HOM05D004186 ORTHO05D032859 1.9e-89 334.0 390 48.7
BolC2t07527H Brassica oleracea HOM05D004186 ORTHO05D032859 7.3e-86 322.0 437 45.8
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 9.6e-86 321.6 305 55.7
MD13G1265000 Malus domestica HOM05D004186 ORTHO05D006965 1.6e-85 320.9 314 56.7
MD13G1264900 Malus domestica HOM05D004186 ORTHO05D006965 1.3e-82 311.2 198 76.8
C02p14070 Brassica napus HOM05D004186 ORTHO05D032859 2.3e-71 273.9 401 43.6
SEGI_37950 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 9.6e-70 268.5 228 62.7
SalBow6G2747 Salvia bowleyana HOM05D004186 ORTHO05D015971 5.8e-67 259.2 147 80.3
A02p08350 Brassica napus HOM05D004186 ORTHO05D015971 1.9e-57 227.6 204 57.4
BraA02t05904Z Brassica rapa HOM05D004186 ORTHO05D015971 1.2e-56 224.9 204 56.9
arahy.Tifrunner.gnm1.ann1.P4UX3D Arachis hypogaea HOM05D004186 ORTHO05D015971 1.0e-50 205.3 162 61.1
arahy.Tifrunner.gnm1.ann1.NDN785 Arachis hypogaea HOM05D004186 ORTHO05D015971 5.0e-50 203.0 162 60.5
Rhsim01G0008600 Rhododendron simsii HOM05D004186 ORTHO05D015971 3.6e-40 170.2 108 71.3
RhsimUnG0079500 Rhododendron simsii HOM05D004186 ORTHO05D015971 3.6e-40 170.2 108 71.3
FAN17G2491 Fragaria x ananassa HOM05D004186 ORTHO05D006965 8.5e-34 149.1 85 85.9
HanXRQChr09g0269751 Helianthus annuus HOM05D004186 ORTHO05D015971 1.0e-31 142.1 165 49.1
RcHm_v2.0_Chr5g0046871 Rosa chinensis HOM05D004186 ORTHO05D015971 4.5e-27 126.7 75 73.3
TAR383G0623 Trochodendron aralioides HOM05D004186 ORTHO05D415797 2.2e-26 124.4 90 65.6
RcHm_v2.0_Chr5g0036521 Rosa chinensis HOM05D004186 ORTHO05D015971 2.1e-24 117.9 71 76.1
A02p08340 Brassica napus HOM05D004186 ORTHO05D006965 1.3e-21 108.6 75 70.7
Zm00001eb265380 Zea mays HOM05D004186 ORTHO05D008381 6.3e-21 106.3 56 85.7
Ah.08g214930 Amaranthus hybridus HOM05D004186 ORTHO05D061406 1.4e-20 105.1 137 39.4
SalBow7G3706 Salvia bowleyana HOM05D004186 ORTHO05D352404 3.6e-16 90.5 71 69.0
Zm00001eb140760 Zea mays HOM05D004186 ORTHO05D003061 6.8e-15 86.3 72 62.5
Zm00001eb349350 Zea mays HOM05D004186 ORTHO05D006965 6.8e-15 86.3 72 62.5
Sc14g0005990 Simmondsia chinensis HOM05D004186 ORTHO05D039000 9.8e-14 82.4 44 81.8
C02p54480 Brassica napus HOM05D003206 ORTHO05D016781 9.2e-12 75.9 74 48.6
EL10Ac2g04384 Beta vulgaris HOM05D004186 ORTHO05D039000 4.5e-11 73.6 35 88.6
SMO181G0029 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 7.3e-09 66.2 110 38.2
Lsat_1_v5_gn_9_37000 Lactuca sativa HOM05D004186 ORTHO05D011383 4.7e-08 63.5 58 50.0
BcaC01g06364 Brassica carinata HOM05D004186 ORTHO05D011383 1.2e-06 58.9 80 38.8
Lsat_1_v5_gn_0_38501 Lactuca sativa HOM05D002067 ORTHO05D002244 2.0e-06 58.2 40 62.5
Atru.chr3.336 Acer truncatum HOM05D004186 ORTHO05D006037 2.6e-06 57.8 54 55.6
BcaC07g38783 Brassica carinata HOM05D002592 ORTHO05D011383 3.4e-06 57.4 71 40.8
C08p17140 Brassica napus HOM05D004186 ORTHO05D011383 5.8e-06 56.6 57 49.1
BolC8t49341H Brassica oleracea HOM05D004186 ORTHO05D011383 5.8e-06 56.6 57 49.1


User provided reference genes

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