Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 5.0e-174 614.4 321 100.0
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 1.9e-117 426.4 309 67.6
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 3.7e-116 422.2 314 65.6
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 1.7e-113 413.3 309 64.4
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 1.2e-111 407.1 309 65.7
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 2.7e-111 406.0 309 64.7
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 1.3e-110 403.7 298 66.4
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 2.5e-109 399.4 313 62.3
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 3.4e-106 389.0 407 51.1
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 5.9e-106 388.3 308 62.0
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 2.1e-103 379.8 313 61.0
SalBow6G2835 Salvia bowleyana HOM05D002214 ORTHO05D007367 4.6e-103 378.6 309 63.8
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 3.3e-101 372.5 363 54.5
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 9.7e-101 370.9 312 58.7
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 4.1e-99 365.5 309 56.6
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 2.0e-98 363.2 298 58.4
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 3.4e-98 362.5 306 57.5
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 3.4e-98 362.5 313 56.9
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 1.3e-97 360.5 305 56.1
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 1.7e-97 360.1 308 56.5
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 3.8e-97 359.0 306 56.9
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 5.0e-97 358.6 334 56.9
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.2e-96 355.9 314 53.5
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.2e-95 354.0 314 52.9
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 1.0e-94 350.9 311 55.3
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 2.6e-93 346.3 294 55.8
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 9.7e-93 344.4 313 53.7
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 1.7e-92 343.6 309 53.1
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 1.7e-92 343.6 313 54.0
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 1.7e-92 343.6 314 54.1
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 2.8e-92 342.8 300 55.0
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 3.7e-92 342.4 317 52.7
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 1.8e-91 340.1 306 54.6
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 9.1e-91 337.8 313 55.6
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 9.1e-91 337.8 292 55.5
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 1.3e-89 334.0 294 58.8
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 2.9e-89 332.8 309 54.0
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 3.8e-89 332.4 294 55.1
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 5.0e-89 332.0 316 50.9
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 8.5e-89 331.3 320 52.2
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 1.9e-88 330.1 312 52.6
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 2.5e-88 329.7 313 51.4
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 9.4e-88 327.8 312 52.6
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 1.6e-87 327.0 312 51.9
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 2.7e-87 326.2 311 53.4
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 4.7e-87 325.5 259 66.4
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 8.0e-87 324.7 288 53.8
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 1.0e-86 324.3 308 50.3
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 1.0e-86 324.3 310 51.3
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 1.4e-86 323.9 310 51.3
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 1.8e-86 323.6 313 50.8
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 1.8e-86 323.6 309 51.1
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 5.2e-86 322.0 307 51.5
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 6.7e-86 321.6 301 52.5
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 2.6e-85 319.7 313 50.5
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 3.3e-85 319.3 303 50.5
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 7.4e-85 318.2 215 72.1
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 1.3e-84 317.4 313 48.6
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 1.7e-84 317.0 312 50.0
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 2.8e-84 316.2 318 48.7
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 6.3e-84 315.1 329 49.2
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 6.3e-84 315.1 308 48.7
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 1.1e-83 314.3 314 51.0
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 3.1e-83 312.8 330 49.4
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 4.1e-83 312.4 314 51.3
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 1.2e-82 310.8 308 48.7
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 1.2e-82 310.8 293 51.2
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 2.0e-82 310.1 312 48.7
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 2.0e-82 310.1 350 46.9
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 2.9e-81 306.2 327 47.7
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 2.9e-81 306.2 323 50.8
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 9.4e-80 301.2 300 50.3
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 1.6e-79 300.4 298 47.0
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 8.0e-79 298.1 304 49.7
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 2.0e-77 293.5 265 55.8
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 2.6e-77 293.1 265 55.8
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 3.1e-75 286.2 305 48.2
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 1.2e-74 284.3 290 50.7
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 1.2e-74 284.3 265 53.2
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 1.5e-72 277.3 288 48.6
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 2.1e-71 273.5 234 55.6
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 1.8e-70 270.4 293 45.1
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 5.2e-70 268.9 322 44.7
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 1.2e-69 267.7 184 64.7
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 5.7e-69 265.4 188 63.8
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 2.2e-68 263.5 316 48.1
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 2.4e-67 260.0 396 39.9
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 2.4e-67 260.0 396 39.9
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 9.1e-67 258.1 315 43.5
FAN06G2164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.9e-64 250.4 209 55.5
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 2.3e-57 226.9 301 42.5
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 1.2e-55 221.1 247 50.2
Aa31LG10G14890 Aethionema arabicum HOM05D002214 ORTHO05D007367 4.4e-53 212.6 246 45.9
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 1.3e-52 211.1 227 48.5
RcHm_v2.0_Chr6g0283161 Rosa chinensis HOM05D002214 ORTHO05D007367 3.7e-52 209.5 333 40.8
QL04p010120 Quercus lobata HOM05D002214 ORTHO05D007367 6.4e-52 208.8 209 52.6
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 1.4e-51 207.6 333 39.9
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.4e-51 207.6 333 39.9
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.3e-49 201.1 331 39.3
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.1e-46 191.4 335 37.9
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.3e-44 184.5 314 39.2
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.4e-43 179.1 326 36.5
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 7.8e-42 175.3 167 52.7
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 9.9e-37 158.3 309 33.0
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 3.2e-35 153.3 302 31.8
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 8.1e-31 138.7 311 31.5
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 1.8e-30 137.5 316 27.2
Mapoly0009s0234 Marchantia polymorpha HOM05D002214 ORTHO05D007367 9.9e-29 131.7 319 29.5
SMO137G0282 Selaginella moellendorffii HOM05D002214 ORTHO05D007367 1.7e-28 131.0 291 30.2
SEGI_30351 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 6.4e-28 129.0 140 47.1
Thecc.01G405700 Theobroma cacao HOM05D002214 ORTHO05D007367 3.5e-26 123.2 107 53.3
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 2.3e-25 120.6 131 43.5
CBR_g46897 Chara braunii HOM05D002214 ORTHO05D007367 6.6e-25 119.0 275 30.9
SEGI_07097 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 8.1e-23 112.1 135 44.4
Hma1.2p1_0685F.1_g203250 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 4.4e-21 106.3 114 49.1
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 1.3e-20 104.8 107 52.3
Thecc.01G405800 Theobroma cacao HOM05D002214 ORTHO05D007367 4.9e-20 102.8 82 61.0
Lj9C641T18 Lonicera japonica HOM05D002214 ORTHO05D007367 1.6e-15 87.8 109 46.8
Duzib133G0745 Durio zibethinus HOM05D002214 ORTHO05D007367 2.4e-14 84.0 67 50.7
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 4.9e-12 76.3 77 48.1
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 1.1e-11 75.1 107 39.3
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.1e-11 75.1 107 39.3
Lj9A641T67 Lonicera japonica HOM05D002214 ORTHO05D007367 1.4e-06 58.2 106 33.0
FAN27G0150 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.8e-06 57.8 130 30.0
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 2.4e-06 57.4 79 38.0
FAN06G4994 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.3e-06 56.2 29 72.4


User provided reference genes

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