Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049272.2 Olea europaea HOM05D006184 ORTHO05D007862 0.0e+00 1483.0 716 100.0
Oeu009379.1 Olea europaea HOM05D006184 ORTHO05D007862 0.0e+00 1249.2 716 86.2
CSS0002743 Camellia sinensis var. sinensis HOM05D006184 ORTHO05D007862 0.0e+00 1190.3 716 81.3
Cc01_g13950 Coffea canephora HOM05D006184 ORTHO05D007862 0.0e+00 1183.7 714 81.0
Hma1.2p1_0227F.1_g096310 Hydrangea macrophylla HOM05D006184 ORTHO05D007862 0.0e+00 1182.2 712 81.5
MSTRG.24765 Avicennia marina HOM05D006184 ORTHO05D007862 0.0e+00 1178.7 714 81.1
Rhsim13G0072000 Rhododendron simsii HOM05D006184 ORTHO05D007862 0.0e+00 1171.8 716 80.3
Nitab4.5_0001970g0070 Nicotiana tabacum HOM05D006184 ORTHO05D007862 0.0e+00 1170.6 716 79.7
Nitab4.5_0000102g0140 Nicotiana tabacum HOM05D006184 ORTHO05D007862 0.0e+00 1169.8 716 79.7
Lj1A141T56 Lonicera japonica HOM05D006184 ORTHO05D007862 0.0e+00 1165.2 716 79.9
Peaxi162Scf00216g00033 Petunia axillaris HOM05D006184 ORTHO05D007862 0.0e+00 1164.4 717 79.5
Actinidia38827 Actinidia chinensis HOM05D006184 ORTHO05D007862 0.0e+00 1161.0 716 80.4
COL.COLO4_19110 Corchorus olitorius HOM05D006184 ORTHO05D007862 0.0e+00 1159.4 713 79.1
Peaxi162Scf00451g00511 Petunia axillaris HOM05D006184 ORTHO05D007862 0.0e+00 1157.9 717 79.2
Atru.chr3.4272 Acer truncatum HOM05D006184 ORTHO05D007862 0.0e+00 1156.7 712 78.9
DCAR_007390 Daucus carota HOM05D006184 ORTHO05D007862 0.0e+00 1156.0 714 79.6
SalBow2G2183 Salvia bowleyana HOM05D006184 ORTHO05D007862 0.0e+00 1154.4 712 79.8
Duzib168G0250 Durio zibethinus HOM05D006184 ORTHO05D007862 0.0e+00 1152.5 713 78.7
Thecc.09G305300 Theobroma cacao HOM05D006184 ORTHO05D007862 0.0e+00 1152.5 713 78.7
PGSC0003DMG400004151 Solanum tuberosum HOM05D006184 ORTHO05D007862 0.0e+00 1151.3 714 78.7
Gohir.A03G049500 Gossypium hirsutum HOM05D006184 ORTHO05D007862 0.0e+00 1151.0 712 78.5
Gohir.D03G117800 Gossypium hirsutum HOM05D006184 ORTHO05D007862 0.0e+00 1151.0 712 78.4
Gorai.003G124300 Gossypium raimondii HOM05D006184 ORTHO05D007862 0.0e+00 1151.0 712 78.4
Cfa011654 Carpinus fangiana HOM05D006184 ORTHO05D007862 0.0e+00 1150.6 710 78.6
Solyc06g006080.3 Solanum lycopersicum HOM05D006184 ORTHO05D007862 0.0e+00 1150.2 714 78.6
Sopen06g002030 Solanum pennellii HOM05D006184 ORTHO05D007862 0.0e+00 1150.2 714 78.6
HanXRQChr13g0388411 Helianthus annuus HOM05D006184 ORTHO05D007862 0.0e+00 1148.3 714 78.7
Manes.01G164200 Manihot esculenta HOM05D006184 ORTHO05D007862 0.0e+00 1147.5 717 78.8
PGR102G1950 Punica granatum HOM05D006184 ORTHO05D007862 0.0e+00 1147.1 713 78.3
QL01p026813 Quercus lobata HOM05D006184 ORTHO05D007862 0.0e+00 1147.1 713 78.0
CiPaw.13G080700 Carya illinoinensis HOM05D006184 ORTHO05D007862 0.0e+00 1146.7 717 77.7
EL10Ac7g16128 Beta vulgaris HOM05D006184 ORTHO05D007862 0.0e+00 1145.2 715 78.5
Manes.02G121696 Manihot esculenta HOM05D006184 ORTHO05D007862 0.0e+00 1144.4 714 79.1
Migut.G00281 Erythranthe guttata HOM05D006184 ORTHO05D007862 0.0e+00 1143.6 718 79.8
FvH4_3g38200 Fragaria vesca HOM05D006184 ORTHO05D007862 0.0e+00 1142.9 713 78.3
ECA248G3465 Erigeron canadensis HOM05D006184 ORTHO05D007862 0.0e+00 1142.5 714 78.3
TAR633G0598 Trochodendron aralioides HOM05D006184 ORTHO05D007862 0.0e+00 1140.9 710 78.2
Ah.15g099710 Amaranthus hybridus HOM05D006184 ORTHO05D007862 0.0e+00 1140.2 715 77.9
FAN21G1896 Fragaria x ananassa HOM05D006184 ORTHO05D007862 0.0e+00 1139.4 713 77.8
FAN25G1982 Fragaria x ananassa HOM05D006184 ORTHO05D007862 0.0e+00 1139.4 713 78.1
MD11G1080300 Malus domestica HOM05D006184 ORTHO05D007862 0.0e+00 1139.4 713 78.0
AUR62001683 Chenopodium quinoa HOM05D006184 ORTHO05D007862 0.0e+00 1138.3 715 77.8
Phvul.006G065300 Phaseolus vulgaris HOM05D006184 ORTHO05D007862 0.0e+00 1138.3 713 77.1
CsaV3_1G036050 Cucumis sativus L. HOM05D006184 ORTHO05D007862 0.0e+00 1137.1 716 77.0
FAN16G1207 Fragaria x ananassa HOM05D006184 ORTHO05D007862 0.0e+00 1136.3 710 78.0
Prupe.6G060700 Prunus persica HOM05D006184 ORTHO05D007862 0.0e+00 1136.3 713 77.3
GSVIVG01024789001 Vitis vinifera HOM05D006184 ORTHO05D007862 0.0e+00 1136.3 706 79.5
FAN11G1847 Fragaria x ananassa HOM05D006184 ORTHO05D007862 0.0e+00 1135.9 714 77.6
Ciclev10027988m.g Citrus clementina HOM05D006184 ORTHO05D007862 0.0e+00 1135.6 712 77.9
MD03G1074000 Malus domestica HOM05D006184 ORTHO05D007862 0.0e+00 1135.2 713 77.6
RcHm_v2.0_Chr5g0068641 Rosa chinensis HOM05D006184 ORTHO05D007862 0.0e+00 1135.2 713 77.3
MELO3C020563.2 Cucumis melo HOM05D006184 ORTHO05D007862 0.0e+00 1134.8 714 76.6
Medtr3g462970 Medicago truncatula HOM05D006184 ORTHO05D007862 0.0e+00 1134.0 717 76.8
Nn2g13623 Nelumbo nucifera HOM05D006184 ORTHO05D007862 0.0e+00 1133.6 710 77.7
Medtr3g462950 Medicago truncatula HOM05D006184 ORTHO05D007862 0.0e+00 1132.1 717 76.8
Hund04886 Selenicereus undatus HOM05D006184 ORTHO05D007862 0.0e+00 1132.1 718 77.3
VMungo0540G2418 Vigna mungo HOM05D006184 ORTHO05D007862 0.0e+00 1131.3 713 76.6
Ca_14911_v3 Cicer arietinum L. HOM05D006184 ORTHO05D007862 0.0e+00 1130.9 716 76.5
Thhalv10016370m.g Eutrema salsugineum HOM05D006184 ORTHO05D007862 0.0e+00 1130.5 712 77.5
Sc12g0000880 Simmondsia chinensis HOM05D006184 ORTHO05D007862 0.0e+00 1129.8 717 77.0
AUR62020099 Chenopodium quinoa HOM05D006184 ORTHO05D007862 0.0e+00 1128.2 716 77.7
Lj6g0009842 Lotus japonicus HOM05D006184 ORTHO05D007862 0.0e+00 1126.7 713 76.3
Psat5g162200 Pisum sativum HOM05D006184 ORTHO05D007862 0.0e+00 1126.7 716 76.4
Glyma.18G065700 Glycine max HOM05D006184 ORTHO05D007862 0.0e+00 1125.9 715 76.5
Eucgr.B02273 Eucalyptus grandis HOM05D006184 ORTHO05D007862 0.0e+00 1125.5 713 77.1
MBI05_g03463_MAGBIO Magnolia biondii HOM05D006184 ORTHO05D007862 0.0e+00 1125.5 711 77.4
Ah.08g220740 Amaranthus hybridus HOM05D006184 ORTHO05D007862 0.0e+00 1125.2 715 76.4
ClCG03G000880 Citrullus lanatus HOM05D006184 ORTHO05D007862 0.0e+00 1124.8 714 76.5
Sp4g12340 Schrenkiella parvula HOM05D006184 ORTHO05D007862 0.0e+00 1124.8 713 77.4
Aqoxy4G02661 Aquilegia oxysepala HOM05D006184 ORTHO05D007862 0.0e+00 1124.4 712 77.9
AT2G29630 Arabidopsis thaliana HOM05D006184 ORTHO05D007862 0.0e+00 1123.6 711 77.4
arahy.Tifrunner.gnm1.ann1.F7MUQP Arachis hypogaea HOM05D006184 ORTHO05D007862 0.0e+00 1122.8 713 76.4
CARHR122950 Cardamine hirsuta HOM05D006184 ORTHO05D007862 0.0e+00 1122.5 713 77.6
Sed0012033 Sechium edule HOM05D006184 ORTHO05D007862 0.0e+00 1120.9 714 76.2
Carub.0004s1072 Capsella rubella HOM05D006184 ORTHO05D007862 0.0e+00 1120.1 714 77.2
HanXRQChr10g0298731 Helianthus annuus HOM05D006184 ORTHO05D007862 0.0e+00 1119.8 713 77.3
Sc06g0008420 Simmondsia chinensis HOM05D006184 ORTHO05D007862 0.0e+00 1119.8 715 76.5
ATR0564G389 Amborella trichopoda HOM05D006184 ORTHO05D007862 0.0e+00 1119.4 576 91.5
arahy.Tifrunner.gnm1.ann1.N1U5TX Arachis hypogaea HOM05D006184 ORTHO05D007862 0.0e+00 1118.6 713 76.3
Lalb_Chr17g0345001 Lupinus albus HOM05D006184 ORTHO05D007862 0.0e+00 1118.2 713 76.3
AL4G24380 Arabidopsis lyrata HOM05D006184 ORTHO05D007862 0.0e+00 1117.8 711 77.1
Potri.001G249200 Populus trichocarpa HOM05D006184 ORTHO05D007862 0.0e+00 1116.3 581 90.0
Potri.009G043200 Populus trichocarpa HOM05D006184 ORTHO05D007862 0.0e+00 1116.3 581 90.0
Aa31LG5G7380 Aethionema arabicum HOM05D006184 ORTHO05D007862 0.0e+00 1112.8 716 76.4
Sabra09G0030600 Salix brachista HOM05D006184 ORTHO05D007862 0.0e+00 1112.4 581 89.8
BcaC02g11044 Brassica carinata HOM05D006184 ORTHO05D007862 0.0e+00 1111.7 708 77.1
C04p21210 Brassica napus HOM05D006184 ORTHO05D007862 0.0e+00 1111.7 708 77.1
Lsat_1_v5_gn_5_158421 Lactuca sativa HOM05D006184 ORTHO05D007862 0.0e+00 1111.7 711 76.7
BcaB02g10267 Brassica carinata HOM05D006184 ORTHO05D007862 0.0e+00 1110.5 707 76.9
A05p15770 Brassica napus HOM05D006184 ORTHO05D007862 0.0e+00 1109.7 708 77.1
BraA05t20491Z Brassica rapa HOM05D006184 ORTHO05D007862 0.0e+00 1109.7 708 77.1
Cpa.g.sc112.53 Carica papaya HOM05D006184 ORTHO05D007862 0.0e+00 1109.7 713 77.3
CDE03G0407 Ceratophyllum demersum HOM05D006184 ORTHO05D007862 0.0e+00 1105.9 710 75.8
BolC4t23646H Brassica oleracea HOM05D006184 ORTHO05D007862 0.0e+00 1104.4 708 76.6
Glyma.11G176200 Glycine max HOM05D006184 ORTHO05D007862 0.0e+00 1101.7 715 75.0
CDE04G0688 Ceratophyllum demersum HOM05D006184 ORTHO05D007862 0.0e+00 1099.3 581 88.6
Dinv28618 Davidia involucrata HOM05D006184 ORTHO05D007862 0.0e+00 1096.6 659 81.6
Os03g0679700 Oryza sativa ssp. japonica HOM05D006184 ORTHO05D007862 0.0e+00 1095.5 572 88.8
TWI79G1750 Tripterygium wilfordii HOM05D006184 ORTHO05D007862 0.0e+00 1092.4 584 88.0
CAN.G780.2 Capsicum annuum HOM05D006184 ORTHO05D007862 0.0e+00 1092.0 715 76.1
Zm00001eb051950 Zea mays HOM05D006184 ORTHO05D007862 0.0e+00 1086.2 572 87.9
SGA_v2.0_scaffold142G35644 Striga asiatica HOM05D006184 ORTHO05D007862 0.0e+00 1081.6 719 74.5
SHI12345 Sapria himalayana HOM05D006184 ORTHO05D007862 2.2e-307 1058.5 714 73.1
Haze_24258 Corylus avellana HOM05D006184 ORTHO05D007862 2.9e-307 1058.1 710 73.7
Pp3c16_8630 Physcomitrium patens HOM05D006184 ORTHO05D007862 1.2e-300 1036.2 569 86.3
AagrBONN_evm.TU.Sc2ySwM_117.2039 Anthoceros agrestis HOM05D006184 ORTHO05D007862 3.8e-299 1031.2 579 84.1
Mapoly0078s0008 Marchantia polymorpha HOM05D006184 ORTHO05D007862 6.1e-297 1023.8 582 82.5
Pp3c25_5720 Physcomitrium patens HOM05D006184 ORTHO05D007862 5.2e-296 1020.8 569 84.7
TPR.G13280 Trifolium pratense HOM05D006184 ORTHO05D007862 1.2e-295 1019.6 716 71.1
HPP92_012628 Vanilla planifolia HOM05D006184 ORTHO05D007862 1.3e-294 1016.1 540 87.6
SMO272G0033 Selaginella moellendorffii HOM05D006184 ORTHO05D007862 2.1e-289 998.8 564 82.8
SMO165G0141 Selaginella moellendorffii HOM05D006184 ORTHO05D007862 1.7e-286 989.2 555 83.1
Cfa015458 Carpinus fangiana HOM05D006184 ORTHO05D007862 3.5e-276 954.9 680 70.3
CBR_g30996 Chara braunii HOM05D006184 ORTHO05D007862 5.3e-248 861.3 475 86.3
Cre05.g240850 Chlamydomonas reinhardtii HOM05D006184 ORTHO05D007862 1.3e-227 793.5 513 73.7
Haze_26876 Corylus avellana HOM05D006184 ORTHO05D007862 5.4e-192 675.2 581 59.0
vmacro02987 Vaccinium macrocarpon HOM05D006184 ORTHO05D007862 8.5e-190 667.9 461 72.7
Sabra16G0151300 Salix brachista HOM05D006184 ORTHO05D007862 6.1e-188 661.8 349 88.5
RcHm_v2.0_Chr5g0068681 Rosa chinensis HOM05D006184 ORTHO05D007862 3.8e-145 519.6 267 91.8
SMO165G0069 Selaginella moellendorffii HOM05D006184 ORTHO05D007862 2.5e-125 453.8 551 47.5
SEGI_15306 Sequoiadendron giganteum HOM05D006184 ORTHO05D007862 1.6e-74 285.0 225 62.7
Nn2g11393 Nelumbo nucifera HOM05D006184 ORTHO05D007862 7.5e-69 266.2 125 95.2
Nn2g11394 Nelumbo nucifera HOM05D006184 ORTHO05D049308 9.9e-45 186.0 101 84.2
RcHm_v2.0_Chr5g0068691 Rosa chinensis HOM05D006184 ORTHO05D049308 3.3e-40 171.0 93 86.0
Nn2g11392 Nelumbo nucifera HOM05D006184 ORTHO05D007862 5.2e-38 163.7 137 59.9
Actinidia16074 Actinidia chinensis HOM05D006184 ORTHO05D007862 1.3e-36 159.1 150 58.7
Hma1.2p1_2020F.1_g311280 Hydrangea macrophylla HOM05D006184 ORTHO05D007862 4.9e-20 104.0 53 92.5
Hma1.2p1_0315F.1_g122560 Hydrangea macrophylla HOM05D006184 ORTHO05D007862 5.4e-19 100.5 53 90.6
Ah.02g117460 Amaranthus hybridus HOM05D000595 ORTHO05D004141 2.8e-07 61.6 32 87.5


User provided reference genes

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