Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 3.9e-210 734.6 378 100.0
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 1.2e-155 553.5 377 76.1
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 2.1e-155 552.7 379 74.4
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 8.0e-155 550.8 375 76.5
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 1.0e-154 550.4 375 76.3
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 1.8e-154 549.7 375 75.5
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 1.5e-153 546.6 375 75.2
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 9.2e-151 537.3 376 74.5
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 1.2e-150 537.0 382 75.4
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 2.3e-149 532.7 376 74.5
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 1.5e-148 530.0 380 74.7
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 4.7e-147 525.0 375 73.3
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 1.2e-145 520.4 381 73.8
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 7.5e-145 517.7 380 72.4
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 1.3e-144 516.9 366 74.9
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 1.7e-144 516.5 387 71.8
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 1.7e-144 516.5 382 72.0
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 6.4e-144 514.6 349 76.5
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 6.4e-144 514.6 377 72.1
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 1.4e-143 513.5 381 72.7
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 1.9e-143 513.1 386 71.8
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 7.1e-143 511.1 358 74.3
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 1.6e-142 510.0 381 70.3
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 2.1e-142 509.6 387 71.3
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 6.0e-142 508.1 367 73.8
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 3.9e-141 505.4 379 71.0
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 5.1e-141 505.0 367 73.3
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 6.6e-141 504.6 389 70.4
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 1.5e-140 503.4 379 71.0
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 2.5e-140 502.7 382 69.6
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 5.6e-140 501.5 347 75.5
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 7.3e-140 501.1 381 70.1
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 4.7e-139 498.4 395 70.4
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 8.1e-139 497.7 384 70.8
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 8.1e-139 497.7 385 70.1
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 8.1e-139 497.7 370 71.6
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 1.8e-138 496.5 374 71.4
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 1.8e-138 496.5 349 72.8
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 2.3e-138 496.1 413 66.3
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 5.2e-138 495.0 378 70.4
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 5.2e-138 495.0 378 70.4
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 1.5e-137 493.4 386 69.9
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 5.8e-137 491.5 378 70.1
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 7.6e-137 491.1 313 80.5
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 9.9e-137 490.7 333 76.3
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 1.7e-136 490.0 358 71.5
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 2.9e-136 489.2 379 69.7
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 2.9e-136 489.2 382 69.9
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 2.9e-136 489.2 378 70.1
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 2.9e-136 489.2 378 70.1
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 2.9e-136 489.2 381 69.6
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 8.4e-136 487.6 379 70.4
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 1.1e-135 487.3 345 73.3
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 1.1e-135 487.3 381 70.1
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 2.4e-135 486.1 388 69.3
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 5.4e-135 485.0 376 69.9
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 9.2e-135 484.2 326 77.0
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 1.2e-134 483.8 378 69.8
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 1.6e-134 483.4 359 70.5
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 2.1e-134 483.0 372 71.0
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 2.1e-134 483.0 386 69.7
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 1.0e-133 480.7 385 68.1
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 3.0e-133 479.2 369 68.8
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 6.6e-133 478.0 374 70.6
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 1.5e-132 476.9 338 76.0
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 2.5e-132 476.1 406 67.7
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 4.3e-132 475.3 331 74.3
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 4.3e-132 475.3 374 70.3
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 5.6e-132 474.9 389 68.1
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 1.2e-131 473.8 378 68.0
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 3.6e-131 472.2 334 73.7
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 1.8e-130 469.9 384 68.0
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 3.1e-130 469.2 342 71.9
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 6.9e-130 468.0 386 67.4
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 8.9e-130 467.6 381 67.2
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 8.9e-130 467.6 330 73.9
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 2.6e-129 466.1 379 67.3
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 2.6e-129 466.1 359 69.1
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 3.4e-129 465.7 381 68.0
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 4.4e-129 465.3 363 70.0
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 5.8e-129 464.9 344 71.5
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 9.9e-129 464.2 380 66.3
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 2.2e-128 463.0 350 70.9
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 4.9e-128 461.8 357 68.1
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 1.1e-127 460.7 356 68.8
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 1.1e-127 460.7 335 73.1
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 3.2e-127 459.1 398 64.3
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 2.7e-126 456.1 335 70.7
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.3e-125 453.8 344 68.6
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 6.6e-125 451.4 379 66.2
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 2.8e-123 446.0 376 66.0
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 2.8e-123 446.0 367 66.2
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 4.8e-123 445.3 374 67.6
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 5.3e-122 441.8 342 70.8
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 6.9e-122 441.4 329 72.0
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 3.4e-121 439.1 279 80.3
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 4.5e-121 438.7 342 70.5
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 2.4e-119 433.0 380 62.9
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 4.2e-119 432.2 332 71.1
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 4.8e-115 418.7 288 76.0
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 9.3e-111 404.4 287 73.2
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 2.1e-110 403.3 386 59.3
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 2.5e-108 396.4 276 72.8
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 7.4e-108 394.8 348 63.5
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 4.8e-107 392.1 276 72.5
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 1.4e-103 380.6 326 63.5
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 1.3e-101 374.0 233 82.0
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 6.3e-99 365.2 286 64.7
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 1.2e-94 350.9 280 69.3
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.3e-91 340.9 288 63.2
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 1.1e-87 327.8 206 79.6
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 1.5e-81 307.4 252 61.5
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 1.3e-80 304.3 281 58.0
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 1.7e-80 303.9 186 84.4
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.5e-76 290.8 243 65.4
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 4.8e-75 285.8 254 57.9
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 1.4e-74 284.3 277 58.1
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 8.0e-70 268.5 234 62.0
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 3.3e-68 263.1 215 67.4
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 3.1e-66 256.5 186 71.0
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 1.7e-59 234.2 186 68.8
RcHm_v2.0_Chr4g0408791 Rosa chinensis HOM05D005463 ORTHO05D006900 2.8e-59 233.4 156 76.9
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 3.5e-57 226.5 186 67.2
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 5.4e-50 202.6 189 60.3
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 9.2e-50 201.8 269 48.3
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 8.6e-48 195.3 124 78.2
arahy.Tifrunner.gnm1.ann1.UWT5DF Arachis hypogaea HOM05D005463 ORTHO05D006900 1.4e-45 188.0 109 85.3
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 8.3e-43 178.7 136 71.3
SEGI_02284 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 6.0e-33 146.0 109 67.0
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 2.1e-30 137.5 249 36.1
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 2.1e-25 120.9 238 34.0
Nn3g19661 Nelumbo nucifera HOM05D005463 ORTHO05D006900 3.3e-23 113.6 191 42.4
Haze_27481 Corylus avellana HOM05D005463 ORTHO05D006900 2.8e-22 110.5 167 40.7
ATR0709G040 Amborella trichopoda HOM05D005463 ORTHO05D006900 4.0e-21 106.7 156 41.7
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 4.0e-21 106.7 76 72.4
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 5.2e-21 106.3 241 30.7
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 8.4e-19 99.0 84 56.0
RcHm_v2.0_Chr1g0375041 Rosa chinensis HOM05D005463 ORTHO05D006900 2.7e-17 94.0 50 88.0
MBI14_g30707_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 6.0e-17 92.8 71 62.0
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 9.0e-13 79.0 123 46.3


User provided reference genes

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