Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046770.1 Olea europaea HOM05D005907 ORTHO05D007033 1.4e-99 366.3 186 100.0
Oeu047809.2 Olea europaea HOM05D005907 ORTHO05D007033 1.8e-75 286.2 186 78.5
Migut.A00472 Erythranthe guttata HOM05D005907 ORTHO05D007033 3.3e-53 212.2 187 59.9
Actinidia01244 Actinidia chinensis HOM05D005907 ORTHO05D007033 1.3e-52 210.3 175 59.4
MSTRG.25750 Avicennia marina HOM05D005907 ORTHO05D007033 1.1e-51 207.2 183 56.8
Cc08_g05990 Coffea canephora HOM05D005907 ORTHO05D007033 1.4e-51 206.8 186 58.1
CSS0017808 Camellia sinensis var. sinensis HOM05D005907 ORTHO05D007033 7.7e-50 201.1 178 54.5
Atru.chr8.2614 Acer truncatum HOM05D005907 ORTHO05D007033 1.3e-49 200.3 185 54.6
Cfa012308 Carpinus fangiana HOM05D005907 ORTHO05D007033 5.5e-48 194.9 175 53.7
Lj3A1053G42 Lonicera japonica HOM05D005907 ORTHO05D007033 5.5e-48 194.9 187 56.7
Peaxi162Scf00876g00429 Petunia axillaris HOM05D005907 ORTHO05D007033 9.4e-48 194.1 169 58.6
CiPaw.11G074000 Carya illinoinensis HOM05D005907 ORTHO05D007033 1.0e-46 190.7 180 54.4
Rhsim11G0037900 Rhododendron simsii HOM05D005907 ORTHO05D007033 5.2e-46 188.3 186 52.7
TAR636G1547 Trochodendron aralioides HOM05D005907 ORTHO05D007033 1.1e-45 187.2 182 50.5
Potri.004G235000 Populus trichocarpa HOM05D005907 ORTHO05D007033 3.3e-45 185.7 182 54.4
Duzib205G2043 Durio zibethinus HOM05D005907 ORTHO05D007033 5.7e-45 184.9 173 53.8
SalBow8G0159 Salvia bowleyana HOM05D005907 ORTHO05D007033 1.4e-43 180.3 185 55.1
RcHm_v2.0_Chr7g0215261 Rosa chinensis HOM05D005907 ORTHO05D007033 1.8e-43 179.9 180 53.9
COL.COLO4_16745 Corchorus olitorius HOM05D005907 ORTHO05D007033 2.4e-43 179.5 172 53.5
Lalb_Chr16g0380441 Lupinus albus HOM05D005907 ORTHO05D007033 4.1e-43 178.7 178 50.0
GSVIVG01036890001 Vitis vinifera HOM05D005907 ORTHO05D007033 4.1e-43 178.7 173 51.4
SGA_v2.0_scaffold121G33056 Striga asiatica HOM05D005907 ORTHO05D007033 5.3e-43 178.3 185 52.4
TWI60G0533 Tripterygium wilfordii HOM05D005907 ORTHO05D007033 9.1e-43 177.6 175 49.1
Lalb_Chr09g0325061 Lupinus albus HOM05D005907 ORTHO05D007033 1.6e-42 176.8 174 50.0
Ciclev10012886m.g Citrus clementina HOM05D005907 ORTHO05D007033 4.5e-42 175.3 185 50.8
Prupe.5G013600 Prunus persica HOM05D005907 ORTHO05D007033 1.7e-41 173.3 187 49.7
Manes.17G003749 Manihot esculenta HOM05D005907 ORTHO05D007033 2.9e-41 172.6 177 46.3
PGR031G0343 Punica granatum HOM05D005907 ORTHO05D007033 5.0e-41 171.8 176 47.7
SalBow4G0438 Salvia bowleyana HOM05D005907 ORTHO05D007033 1.1e-40 170.6 187 50.3
Thecc.03G320600 Theobroma cacao HOM05D005907 ORTHO05D007033 1.1e-40 170.6 174 51.7
Medtr5g025640 Medicago truncatula HOM05D005907 ORTHO05D007033 1.5e-40 170.2 175 48.0
Glyma.01G153000 Glycine max HOM05D005907 ORTHO05D007033 4.2e-40 168.7 179 45.8
Lalb_Chr05g0215181 Lupinus albus HOM05D005907 ORTHO05D007033 4.2e-40 168.7 177 45.8
CAN.G998.7 Capsicum annuum HOM05D005907 ORTHO05D007033 5.5e-40 168.3 153 57.5
FAN04G3107 Fragaria x ananassa HOM05D005907 ORTHO05D007033 5.5e-40 168.3 179 50.3
Nn1g09337 Nelumbo nucifera HOM05D005907 ORTHO05D007033 5.5e-40 168.3 183 47.5
Hund14310 Selenicereus undatus HOM05D005907 ORTHO05D007033 5.5e-40 168.3 172 47.7
vmacro00100 Vaccinium macrocarpon HOM05D005907 ORTHO05D007033 7.2e-40 167.9 184 47.3
Glyma.09G218300 Glycine max HOM05D005907 ORTHO05D007033 9.4e-40 167.5 179 45.3
Solyc08g075290.2 Solanum lycopersicum HOM05D005907 ORTHO05D007033 1.2e-39 167.2 163 52.8
Psat2g145040 Pisum sativum HOM05D005907 ORTHO05D007033 3.6e-39 165.6 177 45.8
FvH4_5g24980 Fragaria vesca HOM05D005907 ORTHO05D007033 6.1e-39 164.9 172 50.6
FAN18G3850 Fragaria x ananassa HOM05D005907 ORTHO05D007033 6.1e-39 164.9 172 50.6
VMungo1215G2629 Vigna mungo HOM05D001324 ORTHO05D001220 6.1e-39 164.9 174 46.6
arahy.Tifrunner.gnm1.ann1.4G5U2W Arachis hypogaea HOM05D005907 ORTHO05D007033 8.0e-39 164.5 176 47.7
arahy.Tifrunner.gnm1.ann1.Y9HS7A Arachis hypogaea HOM05D005907 ORTHO05D007033 8.0e-39 164.5 176 47.7
Sopen08g023890 Solanum pennellii HOM05D005907 ORTHO05D007033 1.4e-38 163.7 163 51.5
TPR.G8986 Trifolium pratense HOM05D005907 ORTHO05D007033 1.8e-38 163.3 177 45.8
FAN08G1334 Fragaria x ananassa HOM05D005907 ORTHO05D007033 2.3e-38 162.9 175 49.1
MD06G1011300 Malus domestica HOM05D005907 ORTHO05D007033 3.0e-38 162.5 191 44.5
ClCG07G011130 Citrullus lanatus HOM05D005907 ORTHO05D007033 5.2e-38 161.8 159 49.1
Duzib068G0478 Durio zibethinus HOM05D005907 ORTHO05D007033 1.2e-37 160.6 178 50.6
PSO339G2078 Papaver somniferum HOM05D005907 ORTHO05D007033 1.5e-37 160.2 165 46.1
CsaV3_4G007120 Cucumis sativus L. HOM05D005907 ORTHO05D007033 2.6e-37 159.5 171 45.6
TAR629G0350 Trochodendron aralioides HOM05D005907 ORTHO05D007033 3.3e-37 159.1 167 47.3
Gorai.004G176900 Gossypium raimondii HOM05D005907 ORTHO05D007033 7.5e-37 157.9 174 47.1
Nn3g19120 Nelumbo nucifera HOM05D005907 ORTHO05D007033 7.5e-37 157.9 166 48.8
Sed0007709 Sechium edule HOM05D005907 ORTHO05D007033 9.7e-37 157.5 164 46.3
Nitab4.5_0000986g0090 Nicotiana tabacum HOM05D005907 ORTHO05D007033 2.2e-36 156.4 168 50.6
Phvul.002G122500 Phaseolus vulgaris HOM05D005907 ORTHO05D007033 4.8e-36 155.2 162 45.7
Gohir.A08G148600 Gossypium hirsutum HOM05D005907 ORTHO05D007033 6.3e-36 154.8 174 47.7
Gohir.D12G203800 Gossypium hirsutum HOM05D005907 ORTHO05D007033 1.1e-35 154.1 172 44.8
Lj2g0019236 Lotus japonicus HOM05D005907 ORTHO05D007033 1.1e-35 154.1 174 45.4
Eucgr.E01152 Eucalyptus grandis HOM05D005907 ORTHO05D007033 1.8e-35 153.3 172 43.0
Gorai.008G218600 Gossypium raimondii HOM05D005907 ORTHO05D007033 3.1e-35 152.5 172 44.2
Gohir.D08G169700 Gossypium hirsutum HOM05D005907 ORTHO05D007033 1.6e-34 150.2 174 46.6
Manes.15G184500 Manihot esculenta HOM05D005907 ORTHO05D007033 1.6e-34 150.2 146 48.6
Medtr8g072220 Medicago truncatula HOM05D005907 ORTHO05D007033 1.6e-34 150.2 173 44.5
Thhalv10008873m.g Eutrema salsugineum HOM05D005907 ORTHO05D007033 3.5e-34 149.1 178 42.7
HanXRQChr08g0233691 Helianthus annuus HOM05D005907 ORTHO05D007033 3.5e-34 149.1 189 46.0
Sed0019955 Sechium edule HOM05D005907 ORTHO05D007033 3.5e-34 149.1 171 39.8
Carub.0001s3002 Capsella rubella HOM05D005907 ORTHO05D007033 4.5e-34 148.7 173 44.5
Sp7g17980 Schrenkiella parvula HOM05D005907 ORTHO05D007033 4.5e-34 148.7 150 48.0
AL1G45790 Arabidopsis lyrata HOM05D005907 ORTHO05D007033 5.9e-34 148.3 169 45.6
ECA233G3754 Erigeron canadensis HOM05D005907 ORTHO05D007033 5.9e-34 148.3 172 48.8
Sp1g27370 Schrenkiella parvula HOM05D005907 ORTHO05D007033 2.2e-33 146.4 160 45.6
CARHR226160 Cardamine hirsuta HOM05D005907 ORTHO05D007033 2.9e-33 146.0 157 47.8
BcaB04g18131 Brassica carinata HOM05D005907 ORTHO05D007033 3.8e-33 145.6 155 45.8
A08p10440 Brassica napus HOM05D005907 ORTHO05D007033 3.8e-33 145.6 175 43.4
CARHR031020 Cardamine hirsuta HOM05D005907 ORTHO05D007033 5.0e-33 145.2 175 41.7
AT4G19370 Arabidopsis thaliana HOM05D005907 ORTHO05D007033 8.5e-33 144.4 150 47.3
BcaNung01784 Brassica carinata HOM05D005907 ORTHO05D007033 8.5e-33 144.4 147 48.3
BcaC07g37737 Brassica carinata HOM05D005907 ORTHO05D007033 1.1e-32 144.1 152 46.7
BolC8t48118H Brassica oleracea HOM05D005907 ORTHO05D007033 1.1e-32 144.1 152 46.7
THA.LOC104814387 Tarenaya hassleriana HOM05D005907 ORTHO05D007033 1.1e-32 144.1 170 42.9
Glyma.16G076400 Glycine max HOM05D005907 ORTHO05D007033 3.2e-32 142.5 179 44.1
Thhalv10026210m.g Eutrema salsugineum HOM05D005907 ORTHO05D007033 4.2e-32 142.1 150 46.7
CANSAT35G1964 Cannabis sativa HOM05D005907 ORTHO05D007033 5.5e-32 141.7 177 42.9
Gohir.A12G201000 Gossypium hirsutum HOM05D005907 ORTHO05D007033 9.4e-32 141.0 173 43.4
Aa31LG2G14390 Aethionema arabicum HOM05D005907 ORTHO05D007033 1.2e-31 140.6 165 44.2
THA.LOC104806200 Tarenaya hassleriana HOM05D005907 ORTHO05D007033 1.2e-31 140.6 150 44.0
BraA08t33042Z Brassica rapa HOM05D005907 ORTHO05D007033 2.7e-31 139.4 182 41.8
AL7G34790 Arabidopsis lyrata HOM05D005907 ORTHO05D007033 6.1e-31 138.3 150 46.0
Sp4g03880 Schrenkiella parvula HOM05D005907 ORTHO05D007033 6.1e-31 138.3 150 46.0
unitig_37.g12906 Utricularia gibba HOM05D005907 ORTHO05D007033 1.0e-30 137.5 149 48.3
Aa31LG6G1970 Aethionema arabicum HOM05D005907 ORTHO05D007033 1.4e-30 137.1 177 42.9
Carub.0007s2186 Capsella rubella HOM05D005907 ORTHO05D007033 1.4e-30 137.1 150 46.0
Nitab4.5_0006244g0030 Nicotiana tabacum HOM05D005907 ORTHO05D007033 1.4e-30 137.1 148 52.0
A01p11320 Brassica napus HOM05D005907 ORTHO05D007033 4.0e-30 135.6 164 42.7
BraA01t01076Z Brassica rapa HOM05D005907 ORTHO05D007033 4.0e-30 135.6 164 42.7
ATR0568G210 Amborella trichopoda HOM05D005907 ORTHO05D007033 8.8e-30 134.4 148 46.6
VMungo0251G3198 Vigna mungo HOM05D005907 ORTHO05D007033 8.8e-30 134.4 173 41.6
Dinv37434 Davidia involucrata HOM05D005907 ORTHO05D007033 1.2e-29 134.0 125 55.2
PGR042G1103 Punica granatum HOM05D005907 ORTHO05D007033 1.5e-29 133.7 158 46.8
BcaC09g51418 Brassica carinata HOM05D005907 ORTHO05D007033 2.6e-29 132.9 164 42.1
C01p13330 Brassica napus HOM05D005907 ORTHO05D007033 2.6e-29 132.9 164 42.1
BolC1t01308H Brassica oleracea HOM05D005907 ORTHO05D007033 2.6e-29 132.9 164 42.1
Cpa.g.c30909 Carica papaya HOM05D005907 ORTHO05D007033 7.0e-27 124.8 137 48.9
AT1G31720 Arabidopsis thaliana HOM05D005907 ORTHO05D007033 1.2e-26 124.0 128 46.1
Phvul.003G278300 Phaseolus vulgaris HOM05D005907 ORTHO05D007033 2.7e-26 122.9 145 44.1
EL10Ac5g12591 Beta vulgaris HOM05D005907 ORTHO05D007033 2.9e-25 119.4 188 38.3
Sc07g0008040 Simmondsia chinensis HOM05D005907 ORTHO05D007033 1.1e-24 117.5 117 48.7
CDE01G0013 Ceratophyllum demersum HOM05D005907 ORTHO05D007033 1.2e-23 114.0 148 41.2
Haze_08421 Corylus avellana HOM05D005907 ORTHO05D007033 3.0e-22 109.4 99 52.5
Zm00001eb251950 Zea mays HOM05D005907 ORTHO05D007033 1.2e-21 107.5 133 39.1
Psat4g109120 Pisum sativum HOM05D005907 ORTHO05D007033 4.4e-21 105.5 131 42.7
Peaxi162Scf00550g00429 Petunia axillaris HOM05D005907 ORTHO05D007033 9.8e-21 104.4 98 54.1
Os02g0703300 Oryza sativa ssp. japonica HOM05D005907 ORTHO05D007033 4.9e-20 102.1 135 37.0
Nitab4.5_0009213g0030 Nicotiana tabacum HOM05D005907 ORTHO05D007033 1.1e-19 100.9 174 39.7
Sed0021253 Sechium edule HOM05D005907 ORTHO05D007033 1.6e-18 97.1 126 36.5
SEGI_15207 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 2.3e-17 93.2 165 32.7
Haze_08422 Corylus avellana HOM05D005907 ORTHO05D007033 1.1e-16 90.9 76 55.3
ClCG11G016120 Citrullus lanatus HOM05D005907 ORTHO05D007033 3.3e-16 89.4 102 41.2
Aqoxy2G03476 Aquilegia oxysepala HOM05D005907 ORTHO05D007033 6.1e-15 85.1 108 46.3
arahy.Tifrunner.gnm1.ann1.UI3LS8 Arachis hypogaea HOM05D005907 ORTHO05D007033 3.1e-14 82.8 103 40.8
SEGI_02785 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 1.5e-13 80.5 140 35.0
Nitab4.5_0000943g0070 Nicotiana tabacum HOM05D005907 ORTHO05D007033 2.6e-13 79.7 95 47.4
arahy.Tifrunner.gnm1.ann1.VB8HUC Arachis hypogaea HOM05D005907 ORTHO05D007033 9.8e-13 77.8 101 41.6
arahy.Tifrunner.gnm1.ann1.93DHY7 Arachis hypogaea HOM05D005907 ORTHO05D007033 2.4e-11 73.2 80 46.2
ClCG11G016110 Citrullus lanatus HOM05D005907 ORTHO05D007033 7.0e-11 71.6 67 46.3
SMO201G0204 Selaginella moellendorffii HOM05D002819 ORTHO05D003207 7.0e-11 71.6 166 28.9
Lsat_1_v5_gn_6_17141 Lactuca sativa HOM05D005907 ORTHO05D007033 1.6e-10 70.5 80 46.2
MELO3C016217.2 Cucumis melo HOM05D005907 ORTHO05D007033 3.5e-10 69.3 61 49.2
CiPaw.06G020000 Carya illinoinensis HOM05D002819 ORTHO05D003207 7.8e-10 68.2 142 31.7
PGSC0003DMG400001952 Solanum tuberosum HOM05D005907 ORTHO05D007033 1.3e-09 67.4 60 55.0
Sabra01G0179700 Salix brachista HOM05D005907 ORTHO05D007033 2.3e-09 66.6 72 48.6
ATR0829G057 Amborella trichopoda HOM05D002819 ORTHO05D003207 3.0e-09 66.2 149 29.5
DCAR_014571 Daucus carota HOM05D002819 ORTHO05D003207 1.5e-08 63.9 147 31.3
SGA_v2.0_scaffold50G18432 Striga asiatica HOM05D002819 ORTHO05D003207 1.5e-08 63.9 146 32.2
Actinidia18697 Actinidia chinensis HOM05D002819 ORTHO05D003207 3.3e-08 62.8 159 28.9
Cc02_g00430 Coffea canephora HOM05D002819 ORTHO05D003207 3.3e-08 62.8 158 28.5
Actinidia28266 Actinidia chinensis HOM05D002819 ORTHO05D003207 4.3e-08 62.4 156 28.8
AUR62005090 Chenopodium quinoa HOM05D002819 ORTHO05D003207 4.3e-08 62.4 178 28.1
SEGI_27585 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 1.2e-07 60.8 151 29.8
vmacro06492 Vaccinium macrocarpon HOM05D002819 ORTHO05D003207 1.2e-07 60.8 180 26.1
PGR031G0062 Punica granatum HOM05D002819 ORTHO05D003207 1.6e-07 60.5 155 31.0
Sabra13G0071600 Salix brachista HOM05D002819 ORTHO05D003207 1.6e-07 60.5 161 31.7
AUR62000884 Chenopodium quinoa HOM05D002819 ORTHO05D003207 2.1e-07 60.1 178 28.1
Eucgr.G01794 Eucalyptus grandis HOM05D002819 ORTHO05D003207 2.8e-07 59.7 163 28.8
CSS0046349 Camellia sinensis var. sinensis HOM05D002819 ORTHO05D003207 8.0e-07 58.2 164 27.4
Lalb_Chr19g0139871 Lupinus albus HOM05D002819 ORTHO05D003207 8.0e-07 58.2 152 26.3
Nitab4.5_0000021g0320 Nicotiana tabacum HOM05D002819 ORTHO05D003207 8.0e-07 58.2 158 27.8
vmacro06495 Vaccinium macrocarpon HOM05D002819 ORTHO05D003207 1.1e-06 57.8 152 27.6
THA.LOC104820872 Tarenaya hassleriana HOM05D002819 ORTHO05D003207 1.8e-06 57.0 155 27.1
Rhsim03G0220200 Rhododendron simsii HOM05D002819 ORTHO05D003207 2.3e-06 56.6 156 28.2
CiPaw.05G236700 Carya illinoinensis HOM05D002819 ORTHO05D003207 3.1e-06 56.2 159 28.3
RcHm_v2.0_Chr5g0061411 Rosa chinensis HOM05D029741 ORTHO05D007033 3.1e-06 56.2 35 74.3
vmacro06494 Vaccinium macrocarpon HOM05D002819 ORTHO05D003207 3.1e-06 56.2 159 25.8
Nn3g19275 Nelumbo nucifera HOM05D002819 ORTHO05D003207 4.0e-06 55.8 156 25.6
PSO063G1513 Papaver somniferum HOM05D002819 ORTHO05D003207 4.0e-06 55.8 114 29.8
ECA233G1225 Erigeron canadensis HOM05D002819 ORTHO05D003207 5.2e-06 55.5 154 28.6


User provided reference genes

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