Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046727.1 Olea europaea HOM05D003272 ORTHO05D003776 1.2e-163 579.7 274 100.0
SalBow6G0671 Salvia bowleyana HOM05D003272 ORTHO05D003776 1.1e-108 397.1 275 73.5
Migut.J01867 Erythranthe guttata HOM05D003272 ORTHO05D003776 6.5e-106 387.9 275 70.5
SGA_v2.0_scaffold69G23041 Striga asiatica HOM05D003272 ORTHO05D003776 8.3e-101 370.9 275 67.6
Dinv16344 Davidia involucrata HOM05D003272 ORTHO05D003776 1.1e-97 360.5 272 68.8
MSTRG.6497 Avicennia marina HOM05D003272 ORTHO05D003776 2.5e-97 359.4 274 67.2
GSVIVG01033469001 Vitis vinifera HOM05D003272 ORTHO05D003776 3.2e-97 359.0 273 66.3
Cc06_g15520 Coffea canephora HOM05D003272 ORTHO05D003776 1.2e-96 357.1 230 75.7
CSS0044868 Camellia sinensis var. sinensis HOM05D003272 ORTHO05D003776 1.6e-96 356.7 273 67.4
Lj1C1133T6 Lonicera japonica HOM05D003272 ORTHO05D003776 1.6e-96 356.7 273 66.7
HanXRQChr14g0438261 Helianthus annuus HOM05D003272 ORTHO05D003776 2.1e-96 356.3 226 76.5
MSTRG.19926 Avicennia marina HOM05D003272 ORTHO05D003776 3.6e-96 355.5 275 66.5
SalBow1G7043 Salvia bowleyana HOM05D003272 ORTHO05D003776 4.7e-96 355.1 271 66.1
QL07p024475 Quercus lobata HOM05D003272 ORTHO05D003776 6.1e-96 354.8 273 65.6
FvH4_6g21890 Fragaria vesca HOM05D003272 ORTHO05D003776 8.0e-96 354.4 272 66.5
FAN14G3195 Fragaria x ananassa HOM05D003272 ORTHO05D003776 8.0e-96 354.4 272 66.5
Atru.chr8.1154 Acer truncatum HOM05D003272 ORTHO05D003776 1.0e-95 354.0 230 76.1
CiPaw.10G025200 Carya illinoinensis HOM05D003272 ORTHO05D003776 2.3e-95 352.8 227 75.8
FAN02G4424 Fragaria x ananassa HOM05D003272 ORTHO05D003776 2.3e-95 352.8 269 67.7
Cfa020144 Carpinus fangiana HOM05D003272 ORTHO05D003776 3.0e-95 352.4 273 67.0
Lsat_1_v5_gn_2_56141 Lactuca sativa HOM05D003272 ORTHO05D003776 3.0e-95 352.4 222 77.0
vmacro22626 Vaccinium macrocarpon HOM05D003272 ORTHO05D003776 5.2e-95 351.7 273 66.7
CANSAT64G1991 Cannabis sativa HOM05D003272 ORTHO05D003776 6.8e-95 351.3 271 66.4
FAN09G3998 Fragaria x ananassa HOM05D003272 ORTHO05D003776 6.8e-95 351.3 272 65.8
RcHm_v2.0_Chr3g0479241 Rosa chinensis HOM05D003272 ORTHO05D003776 6.8e-95 351.3 272 65.8
FAN05G4520 Fragaria x ananassa HOM05D003272 ORTHO05D003776 1.2e-94 350.5 272 66.2
Hund24815 Selenicereus undatus HOM05D003272 ORTHO05D003776 1.5e-94 350.1 273 66.7
Thecc.05G174800 Theobroma cacao HOM05D003272 ORTHO05D003776 2.0e-94 349.7 225 77.3
Haze_20019 Corylus avellana HOM05D003272 ORTHO05D003776 3.4e-94 349.0 271 67.5
DCAR_013670 Daucus carota HOM05D003272 ORTHO05D003776 3.4e-94 349.0 241 72.2
TWI74G0429 Tripterygium wilfordii HOM05D003272 ORTHO05D003776 3.4e-94 349.0 232 75.0
ECA238G2479 Erigeron canadensis HOM05D003272 ORTHO05D003776 4.4e-94 348.6 226 75.7
TWI77G0466 Tripterygium wilfordii HOM05D003272 ORTHO05D003776 4.4e-94 348.6 275 65.5
Nitab4.5_0002339g0030 Nicotiana tabacum HOM05D003272 ORTHO05D003776 5.7e-94 348.2 231 74.9
Sabra16G0063100 Salix brachista HOM05D003272 ORTHO05D003776 5.7e-94 348.2 273 67.0
Potri.006G194500 Populus trichocarpa HOM05D003272 ORTHO05D003776 7.5e-94 347.8 273 66.7
Duzib093G2065 Durio zibethinus HOM05D003272 ORTHO05D003776 9.8e-94 347.4 226 75.7
Potri.016G060200 Populus trichocarpa HOM05D003272 ORTHO05D003776 9.8e-94 347.4 273 66.3
Dinv24041 Davidia involucrata HOM05D003272 ORTHO05D003776 1.3e-93 347.1 273 65.2
DCAR_017040 Daucus carota HOM05D003272 ORTHO05D003776 1.7e-93 346.7 273 66.7
Manes.09G037500 Manihot esculenta HOM05D003272 ORTHO05D003776 1.7e-93 346.7 273 66.3
Rhsim03G0003200 Rhododendron simsii HOM05D003272 ORTHO05D003776 1.7e-93 346.7 280 64.3
Lsat_1_v5_gn_1_60961 Lactuca sativa HOM05D003272 ORTHO05D003776 3.7e-93 345.5 227 74.9
TWI53G1277 Tripterygium wilfordii HOM05D003272 ORTHO05D003776 3.7e-93 345.5 230 75.2
Nitab4.5_0000009g0220 Nicotiana tabacum HOM05D003272 ORTHO05D003776 4.9e-93 345.1 230 74.8
COL.COLO4_29357 Corchorus olitorius HOM05D003272 ORTHO05D003776 6.3e-93 344.7 226 75.7
Actinidia22066 Actinidia chinensis HOM05D003272 ORTHO05D003776 1.1e-92 344.0 274 65.0
ClCG04G000900 Citrullus lanatus HOM05D003272 ORTHO05D003776 1.1e-92 344.0 243 70.4
Gohir.A04G054400 Gossypium hirsutum HOM05D003272 ORTHO05D003776 1.4e-92 343.6 226 75.2
THA.LOC104802668 Tarenaya hassleriana HOM05D003272 ORTHO05D003776 1.4e-92 343.6 226 74.8
Solyc10g079010.3 Solanum lycopersicum HOM05D003272 ORTHO05D003776 1.8e-92 343.2 274 65.0
Rhsim04G0095400 Rhododendron simsii HOM05D003272 ORTHO05D003776 3.1e-92 342.4 279 64.2
Peaxi162Scf00463g00423 Petunia axillaris HOM05D003272 ORTHO05D003776 4.1e-92 342.0 273 64.8
arahy.Tifrunner.gnm1.ann1.LQ935E Arachis hypogaea HOM05D003272 ORTHO05D003776 5.4e-92 341.7 230 73.5
arahy.Tifrunner.gnm1.ann1.VD9RJB Arachis hypogaea HOM05D003272 ORTHO05D003776 5.4e-92 341.7 230 73.5
CAN.G960.20 Capsicum annuum HOM05D003272 ORTHO05D003776 9.2e-92 340.9 274 64.6
MD14G1054100 Malus domestica HOM05D003272 ORTHO05D003776 9.2e-92 340.9 277 63.9
TPR.G30306 Trifolium pratense HOM05D003272 ORTHO05D003776 9.2e-92 340.9 230 73.0
Glyma.09G109000 Glycine max HOM05D003272 ORTHO05D003776 1.2e-91 340.5 245 70.2
Ciclev10010926m.g Citrus clementina HOM05D003272 ORTHO05D003776 1.6e-91 340.1 230 74.3
Sopen10g029630 Solanum pennellii HOM05D003272 ORTHO05D003776 1.6e-91 340.1 274 64.6
AUR62012007 Chenopodium quinoa HOM05D003272 ORTHO05D003776 2.0e-91 339.7 273 63.7
Nn2g15739 Nelumbo nucifera HOM05D003272 ORTHO05D003776 2.0e-91 339.7 275 63.6
TAR623G1173 Trochodendron aralioides HOM05D003272 ORTHO05D003776 2.0e-91 339.7 275 63.6
CsaV3_4G031310 Cucumis sativus L. HOM05D003272 ORTHO05D003776 2.7e-91 339.3 245 70.2
Eucgr.K01852 Eucalyptus grandis HOM05D003272 ORTHO05D003776 2.7e-91 339.3 273 65.9
Nitab4.5_0000358g0060 Nicotiana tabacum HOM05D003272 ORTHO05D003776 2.7e-91 339.3 273 65.2
Gorai.013G213300 Gossypium raimondii HOM05D003272 ORTHO05D003776 4.5e-91 338.6 226 73.9
Actinidia38598 Actinidia chinensis HOM05D003272 ORTHO05D003776 7.8e-91 337.8 232 74.1
MELO3C009057.2 Cucumis melo HOM05D003272 ORTHO05D003776 7.8e-91 337.8 245 69.8
HanXRQChr14g0443181 Helianthus annuus HOM05D003272 ORTHO05D003776 7.8e-91 337.8 227 74.9
Peaxi162Scf00003g00473 Petunia axillaris HOM05D003272 ORTHO05D003776 7.8e-91 337.8 226 72.6
PGR142G2098 Punica granatum HOM05D003272 ORTHO05D003776 7.8e-91 337.8 230 70.4
Sed0015373 Sechium edule HOM05D003272 ORTHO05D003776 7.8e-91 337.8 242 70.2
Duzib106G0166 Durio zibethinus HOM05D003272 ORTHO05D003776 1.3e-90 337.0 223 75.3
Nn7g35964 Nelumbo nucifera HOM05D003272 ORTHO05D003776 2.3e-90 336.3 274 64.6
Aqoxy2G00092 Aquilegia oxysepala HOM05D003272 ORTHO05D003776 2.9e-90 335.9 278 63.3
AUR62015331 Chenopodium quinoa HOM05D003272 ORTHO05D003776 2.9e-90 335.9 273 63.4
Actinidia17288 Actinidia chinensis HOM05D003272 ORTHO05D003776 3.8e-90 335.5 232 73.7
Cpa.g.sc85.47 Carica papaya HOM05D003272 ORTHO05D003776 3.8e-90 335.5 228 73.2
Lalb_Chr04g0259561 Lupinus albus HOM05D003272 ORTHO05D003776 8.6e-90 334.3 230 72.2
Gorai.002G155500 Gossypium raimondii HOM05D003272 ORTHO05D003776 1.1e-89 334.0 226 73.5
EL10Ac3g06883 Beta vulgaris HOM05D003272 ORTHO05D003776 1.9e-89 333.2 273 64.5
Lalb_Chr15g0079101 Lupinus albus HOM05D003272 ORTHO05D003776 2.5e-89 332.8 230 70.4
Sabra06G0149200 Salix brachista HOM05D003272 ORTHO05D003776 2.5e-89 332.8 273 63.4
Gohir.D01G124900 Gossypium hirsutum HOM05D003272 ORTHO05D003776 3.3e-89 332.4 223 74.4
THA.LOC104824482 Tarenaya hassleriana HOM05D003272 ORTHO05D003776 5.6e-89 331.6 226 72.1
AL5G39720 Arabidopsis lyrata HOM05D003272 ORTHO05D003776 7.3e-89 331.3 226 71.7
Glyma.19G149800 Glycine max HOM05D003272 ORTHO05D003776 1.6e-88 330.1 273 63.7
Medtr1g054355 Medicago truncatula HOM05D003272 ORTHO05D003776 1.6e-88 330.1 231 71.9
Glyma.03G146500 Glycine max HOM05D003272 ORTHO05D003776 2.1e-88 329.7 230 71.3
Sc13g0002400 Simmondsia chinensis HOM05D003272 ORTHO05D003776 2.1e-88 329.7 273 61.5
AT3G58050 Arabidopsis thaliana HOM05D003272 ORTHO05D003776 2.8e-88 329.3 226 72.1
MBI19_g17426_MAGBIO Magnolia biondii HOM05D003272 ORTHO05D003776 4.7e-88 328.6 276 62.3
Psat0s4022g0120 Pisum sativum HOM05D003272 ORTHO05D003776 8.0e-88 327.8 230 70.4
VMungo0720G0611 Vigna mungo HOM05D003272 ORTHO05D003776 8.0e-88 327.8 232 70.3
Ca_08539_v3 Cicer arietinum L. HOM05D003272 ORTHO05D003776 1.0e-87 327.4 230 70.9
Lj1g0008912 Lotus japonicus HOM05D003272 ORTHO05D003776 1.0e-87 327.4 230 71.3
Sed0015981 Sechium edule HOM05D003272 ORTHO05D003776 1.0e-87 327.4 230 71.7
MBI13_g29652_MAGBIO Magnolia biondii HOM05D003272 ORTHO05D003776 1.4e-87 327.0 241 68.0
vmacro22121 Vaccinium macrocarpon HOM05D003272 ORTHO05D003776 1.4e-87 327.0 304 59.9
VMungo1383G1563 Vigna mungo HOM05D003272 ORTHO05D003776 1.4e-87 327.0 230 70.9
Phvul.001G144300 Phaseolus vulgaris HOM05D003272 ORTHO05D003776 1.8e-87 326.6 230 71.3
Aa31LG10G12750 Aethionema arabicum HOM05D003272 ORTHO05D003776 6.8e-87 324.7 226 69.9
Lalb_Chr18g0048041 Lupinus albus HOM05D003272 ORTHO05D003776 1.5e-86 323.6 230 70.4
Sp5g04670 Schrenkiella parvula HOM05D003272 ORTHO05D003776 1.5e-86 323.6 226 70.4
Gohir.A01G137100 Gossypium hirsutum HOM05D003272 ORTHO05D003776 2.6e-86 322.8 226 72.1
Phvul.007G261300 Phaseolus vulgaris HOM05D003272 ORTHO05D003776 2.6e-86 322.8 230 69.1
ATR0598G091 Amborella trichopoda HOM05D003272 ORTHO05D003776 5.7e-86 321.6 274 63.5
TPR.G13362 Trifolium pratense HOM05D003272 ORTHO05D003776 5.7e-86 321.6 230 69.6
Ca_12036_v3 Cicer arietinum L. HOM05D003272 ORTHO05D003776 1.3e-85 320.5 233 70.0
CARHR168370 Cardamine hirsuta HOM05D003272 ORTHO05D003776 1.7e-85 320.1 226 70.4
ECA248G2064 Erigeron canadensis HOM05D003272 ORTHO05D003776 2.2e-85 319.7 227 71.4
Lj2C363G5 Lonicera japonica HOM05D003272 ORTHO05D003776 1.1e-84 317.4 208 74.0
Ah.04g152770 Amaranthus hybridus HOM05D003272 ORTHO05D003776 1.6e-83 313.5 213 72.3
Psat3g067560 Pisum sativum HOM05D003272 ORTHO05D003776 1.7e-82 310.1 232 69.4
Medtr7g093630 Medicago truncatula HOM05D003272 ORTHO05D003776 3.0e-82 309.3 230 68.3
Lj5g0000225 Lotus japonicus HOM05D003272 ORTHO05D003776 8.6e-82 307.8 268 61.9
PSO384G2805 Papaver somniferum HOM05D003272 ORTHO05D003776 4.0e-79 298.9 274 58.8
Zm00001eb009880 Zea mays HOM05D003272 ORTHO05D003776 6.8e-79 298.1 225 64.9
PSO339G1267 Papaver somniferum HOM05D003272 ORTHO05D003776 1.5e-78 297.0 274 58.4
Sp4g24230 Schrenkiella parvula HOM05D003272 ORTHO05D003776 3.4e-78 295.8 219 67.6
Zm00001eb399270 Zea mays HOM05D003272 ORTHO05D003776 4.4e-78 295.4 225 64.0
Thhalv10016156m.g Eutrema salsugineum HOM05D003272 ORTHO05D003776 2.9e-77 292.7 227 65.2
SEGI_10284 Sequoiadendron giganteum HOM05D003272 ORTHO05D003776 1.1e-76 290.8 222 65.8
CARHR137060 Cardamine hirsuta HOM05D003272 ORTHO05D003776 1.4e-76 290.4 226 63.7
Mapoly0087s0049 Marchantia polymorpha HOM05D003272 ORTHO05D003776 9.2e-76 287.7 222 66.7
SHI31755 Sapria himalayana HOM05D003272 ORTHO05D003776 4.6e-75 285.4 212 68.4
Aa31LG1G24170 Aethionema arabicum HOM05D003272 ORTHO05D003776 6.0e-75 285.0 228 64.5
Zm00001eb025760 Zea mays HOM05D003272 ORTHO05D003776 6.6e-74 281.6 222 61.3
Carub.0004s2429 Capsella rubella HOM05D003272 ORTHO05D003776 1.6e-72 276.9 216 63.4
Pp3c6_26480 Physcomitrium patens HOM05D003272 ORTHO05D003776 1.1e-71 274.2 221 61.5
AL4G40320 Arabidopsis lyrata HOM05D003272 ORTHO05D003776 1.4e-71 273.9 222 61.7
MD12G1054800 Malus domestica HOM05D003272 ORTHO05D003776 6.8e-71 271.6 184 72.3
Prupe.7G081000 Prunus persica HOM05D003272 ORTHO05D003776 1.5e-70 270.4 184 72.3
unitig_0.g524 Utricularia gibba HOM05D003272 ORTHO05D003776 4.4e-70 268.9 273 54.9
Pp3c16_15960 Physcomitrium patens HOM05D003272 ORTHO05D003776 7.5e-70 268.1 223 60.5
Ah.13g075660 Amaranthus hybridus HOM05D003272 ORTHO05D003776 1.3e-69 267.3 224 62.5
AT2G41960 Arabidopsis thaliana HOM05D003272 ORTHO05D003776 2.9e-69 266.2 223 59.2
Ca_12034_v3 Cicer arietinum L. HOM05D003272 ORTHO05D003776 3.7e-69 265.8 187 70.1
SMO137G0342 Selaginella moellendorffii HOM05D003272 ORTHO05D003776 3.7e-69 265.8 216 63.9
AagrBONN_evm.TU.Sc2ySwM_344.2034 Anthoceros agrestis HOM05D003272 ORTHO05D003776 1.7e-66 256.9 226 59.3
BcaB01g03430 Brassica carinata HOM05D003272 ORTHO05D003776 8.6e-66 254.6 216 64.8
A03p23500 Brassica napus HOM05D003272 ORTHO05D003776 3.3e-65 252.7 224 60.3
BraA03t11566Z Brassica rapa HOM05D003272 ORTHO05D003776 3.3e-65 252.7 224 60.3
Hma1.2p1_0116F.1_g056150 Hydrangea macrophylla HOM05D003272 ORTHO05D003776 4.3e-65 252.3 273 53.8
C03p28030 Brassica napus HOM05D003272 ORTHO05D003776 1.2e-64 250.8 230 60.0
BolC3t15173H Brassica oleracea HOM05D003272 ORTHO05D003776 4.7e-64 248.8 225 60.9
Os10g0105400 Oryza sativa ssp. japonica HOM05D003272 ORTHO05D003776 6.2e-64 248.4 222 56.3
BcaC01g05316 Brassica carinata HOM05D003272 ORTHO05D003776 1.8e-63 246.9 218 61.0
A05p02670 Brassica napus HOM05D003272 ORTHO05D003776 2.4e-63 246.5 213 61.0
C04p03190 Brassica napus HOM05D003272 ORTHO05D003776 3.1e-63 246.1 213 61.0
BolC4t21957H Brassica oleracea HOM05D003272 ORTHO05D003776 3.1e-63 246.1 213 61.0
BcaC02g12452 Brassica carinata HOM05D003272 ORTHO05D003776 2.0e-62 243.4 213 60.6
BcaC02g12450 Brassica carinata HOM05D003272 ORTHO05D003776 5.8e-62 241.9 219 59.8
C04p03170 Brassica napus HOM05D003272 ORTHO05D003776 5.8e-62 241.9 219 59.8
BraA05t19259Z Brassica rapa HOM05D003272 ORTHO05D003776 9.9e-62 241.1 216 60.2
DCAR_019863 Daucus carota HOM05D003272 ORTHO05D003776 3.8e-61 239.2 215 55.8
A05p02660 Brassica napus HOM05D003272 ORTHO05D003776 8.4e-61 238.0 219 59.4
Gohir.D01G133800 Gossypium hirsutum HOM05D003272 ORTHO05D003776 7.1e-60 235.0 201 62.7
Gorai.002G165500 Gossypium raimondii HOM05D003272 ORTHO05D003776 1.3e-58 230.7 201 61.7
CDE06G2439 Ceratophyllum demersum HOM05D003272 ORTHO05D003776 2.3e-58 229.9 267 47.6
Thhalv10016161m.g Eutrema salsugineum HOM05D003272 ORTHO05D003776 3.3e-57 226.1 180 63.3
CiPaw.09G028500 Carya illinoinensis HOM05D003272 ORTHO05D003776 3.1e-55 219.5 125 79.2
DCAR_019864 Daucus carota HOM05D003272 ORTHO05D003776 2.2e-45 186.8 211 47.4
DCAR_019865 Daucus carota HOM05D003272 ORTHO05D003776 3.0e-42 176.4 252 41.3
Gohir.A09G128750 Gossypium hirsutum HOM05D003272 ORTHO05D003776 6.2e-40 168.7 129 69.0
Gohir.D04G097200 Gossypium hirsutum HOM05D003272 ORTHO05D003776 8.4e-37 158.3 96 79.2
Zm00001eb224410 Zea mays HOM05D003272 ORTHO05D003776 2.3e-34 150.2 113 64.6
Gorai.006G143700 Gossypium raimondii HOM05D003272 ORTHO05D003776 1.3e-32 144.4 86 76.7
CDE07G0242 Ceratophyllum demersum HOM05D003272 ORTHO05D003776 8.2e-32 141.7 174 46.6
Gohir.D09G124800 Gossypium hirsutum HOM05D003272 ORTHO05D003776 1.1e-31 141.4 86 75.6
TAR369G0389 Trochodendron aralioides HOM05D003272 ORTHO05D003776 3.0e-26 123.2 125 56.0
HPP92_020307 Vanilla planifolia HOM05D003272 ORTHO05D003776 7.4e-25 118.6 209 37.8
Nn3g17087 Nelumbo nucifera HOM05D003272 ORTHO05D003776 3.7e-08 63.2 80 50.0
BcaB03g12386 Brassica carinata HOM05D003272 ORTHO05D003776 6.3e-08 62.4 64 53.1
BcaC04g24042 Brassica carinata HOM05D003272 ORTHO05D003776 6.3e-08 62.4 47 72.3


User provided reference genes

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