Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046358.1 Olea europaea HOM05D004337 ORTHO05D005422 0.0e+00 1190.3 583 100.0
MSTRG.23236 Avicennia marina HOM05D004337 ORTHO05D005422 3.4e-285 984.6 569 83.0
Oeu054207.1 Olea europaea HOM05D004337 ORTHO05D005422 3.7e-284 981.1 589 82.7
CiPaw.15G184900 Carya illinoinensis HOM05D004337 ORTHO05D005422 5.4e-283 977.2 587 80.1
Sopen05g034740 Solanum pennellii HOM05D004337 ORTHO05D005422 1.0e-281 973.0 594 79.1
Dinv09624 Davidia involucrata HOM05D004337 ORTHO05D005422 2.3e-281 971.8 567 83.2
Solyc05g056350.3 Solanum lycopersicum HOM05D004337 ORTHO05D005422 8.6e-281 969.9 594 79.0
Oeu017633.3 Olea europaea HOM05D004337 ORTHO05D005422 3.3e-280 968.0 566 83.0
GSVIVG01000243001 Vitis vinifera HOM05D004337 ORTHO05D005422 3.3e-280 968.0 594 79.1
Thecc.01G146600 Theobroma cacao HOM05D004337 ORTHO05D005422 5.5e-280 967.2 568 81.7
MD15G1140200 Malus domestica HOM05D004337 ORTHO05D005422 7.2e-280 966.8 596 77.9
Cfa020919 Carpinus fangiana HOM05D004337 ORTHO05D005422 9.5e-280 966.5 592 79.4
PGSC0003DMG400023451 Solanum tuberosum HOM05D004337 ORTHO05D005422 1.6e-279 965.7 601 78.4
Migut.H02542 Erythranthe guttata HOM05D004337 ORTHO05D005422 2.1e-279 965.3 595 79.7
Potri.004G134500 Populus trichocarpa HOM05D004337 ORTHO05D005422 2.1e-279 965.3 566 81.1
Gohir.A12G002300 Gossypium hirsutum HOM05D004337 ORTHO05D005422 8.0e-279 963.4 566 81.6
TAR376G0777 Trochodendron aralioides HOM05D004337 ORTHO05D005422 1.0e-278 963.0 591 78.8
CAN.G1156.26 Capsicum annuum HOM05D004337 ORTHO05D005422 3.0e-278 961.4 567 81.1
Sabra04G0083600 Salix brachista HOM05D004337 ORTHO05D005422 8.9e-278 959.9 594 78.1
Gohir.D04G040600 Gossypium hirsutum HOM05D004337 ORTHO05D005422 1.2e-277 959.5 566 80.9
Gorai.012G045800 Gossypium raimondii HOM05D004337 ORTHO05D005422 1.2e-277 959.5 566 80.9
Prupe.4G286100 Prunus persica HOM05D004337 ORTHO05D005422 1.5e-277 959.1 588 79.3
QL10p037473 Quercus lobata HOM05D004337 ORTHO05D005422 2.6e-277 958.4 586 79.0
Hma1.2p1_0296F.1_g116900 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 3.4e-277 958.0 587 79.7
Actinidia36582 Actinidia chinensis HOM05D004337 ORTHO05D005422 4.4e-277 957.6 592 78.9
Gohir.A05G375100 Gossypium hirsutum HOM05D004337 ORTHO05D005422 9.8e-277 956.4 566 80.7
Potri.T045800 Populus trichocarpa HOM05D004337 ORTHO05D005422 1.7e-276 955.7 566 80.7
Potri.018G137500 Populus trichocarpa HOM05D004337 ORTHO05D005422 4.9e-276 954.1 566 80.6
Peaxi162Scf00353g00735 Petunia axillaris HOM05D004337 ORTHO05D005422 6.3e-276 953.7 598 78.4
Gorai.008G001400 Gossypium raimondii HOM05D004337 ORTHO05D005422 1.4e-275 952.6 573 80.3
Manes.12G081000 Manihot esculenta HOM05D004337 ORTHO05D005422 4.5e-274 947.6 586 77.8
Nitab4.5_0000496g0240 Nicotiana tabacum HOM05D004337 ORTHO05D005422 2.3e-273 945.3 581 79.3
MELO3C003282.2 Cucumis melo HOM05D004337 ORTHO05D005422 8.6e-273 943.3 574 79.6
Atru.chr3.1466 Acer truncatum HOM05D004337 ORTHO05D005422 1.5e-272 942.6 574 79.4
unitig_736.g22365 Utricularia gibba HOM05D004337 ORTHO05D005422 2.5e-272 941.8 575 79.7
MBI06_g32147_MAGBIO Magnolia biondii HOM05D004337 ORTHO05D005422 7.3e-272 940.3 579 77.9
PGR119G0424 Punica granatum HOM05D004337 ORTHO05D005422 7.3e-272 940.3 571 80.2
Actinidia19947 Actinidia chinensis HOM05D004337 ORTHO05D005422 2.8e-271 938.3 586 78.2
Ciclev10025224m.g Citrus clementina HOM05D004337 ORTHO05D005422 2.3e-270 935.3 569 78.7
CsaV3_4G030000 Cucumis sativus L. HOM05D004337 ORTHO05D005422 8.9e-270 933.3 566 79.3
Sc16g0009860 Simmondsia chinensis HOM05D004337 ORTHO05D005422 8.9e-270 933.3 598 76.1
Aqoxy5G01850 Aquilegia oxysepala HOM05D004337 ORTHO05D005422 1.2e-269 932.9 586 78.0
VMungo1309G0234 Vigna mungo HOM05D004337 ORTHO05D005422 1.2e-269 932.9 589 77.9
Lalb_Chr12g0202711 Lupinus albus HOM05D004337 ORTHO05D005422 1.5e-269 932.6 594 77.3
TWI75G1462 Tripterygium wilfordii HOM05D004337 ORTHO05D005422 1.5e-269 932.6 568 78.5
SGA_v2.0_scaffold12G06278 Striga asiatica HOM05D004337 ORTHO05D005422 2.0e-269 932.2 589 77.4
arahy.Tifrunner.gnm1.ann1.X1BSDH Arachis hypogaea HOM05D004337 ORTHO05D005422 3.4e-269 931.4 571 79.0
Sed0025757 Sechium edule HOM05D004337 ORTHO05D005422 4.4e-269 931.0 567 79.4
Eucgr.I00018 Eucalyptus grandis HOM05D004337 ORTHO05D005422 9.8e-269 929.9 570 79.3
Nitab4.5_0004764g0030 Nicotiana tabacum HOM05D004337 ORTHO05D005422 1.7e-268 929.1 584 78.8
RcHm_v2.0_Chr3g0484771 Rosa chinensis HOM05D004337 ORTHO05D005422 3.7e-268 927.9 599 75.0
FvH4_1g25770 Fragaria vesca HOM05D004337 ORTHO05D005422 8.3e-268 926.8 599 74.6
EL10Ac4g09743 Beta vulgaris HOM05D004337 ORTHO05D005422 2.4e-267 925.2 580 75.5
THA.LOC104818397 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 2.4e-267 925.2 597 76.7
Psat5g057120 Pisum sativum HOM05D004337 ORTHO05D005422 3.2e-267 924.9 589 75.7
Glyma.04G203800 Glycine max HOM05D004337 ORTHO05D005422 4.1e-267 924.5 588 77.6
Hund21761 Selenicereus undatus HOM05D004337 ORTHO05D005422 5.4e-267 924.1 569 77.3
CANSAT54G2432 Cannabis sativa HOM05D004337 ORTHO05D005422 9.2e-267 923.3 576 77.4
TPR.G7800 Trifolium pratense HOM05D004337 ORTHO05D005422 1.6e-266 922.5 593 75.7
Lalb_Chr07g0183961 Lupinus albus HOM05D004337 ORTHO05D005422 2.0e-266 922.2 591 76.8
Rhsim10G0124700 Rhododendron simsii HOM05D004337 ORTHO05D005422 2.7e-266 921.8 695 67.5
THA.LOC104819366 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 4.6e-266 921.0 569 77.5
FAN23G1824 Fragaria x ananassa HOM05D004337 ORTHO05D005422 1.3e-265 919.5 618 73.1
FAN28G1720 Fragaria x ananassa HOM05D004337 ORTHO05D005422 2.3e-265 918.7 618 73.0
AUR62006971 Chenopodium quinoa HOM05D004337 ORTHO05D005422 3.0e-265 918.3 613 73.4
Lj1g0000957 Lotus japonicus HOM05D004337 ORTHO05D005422 3.9e-265 917.9 592 76.4
FAN19G0301 Fragaria x ananassa HOM05D004337 ORTHO05D005422 6.6e-265 917.1 616 72.9
AUR62000615 Chenopodium quinoa HOM05D004337 ORTHO05D005422 1.1e-264 916.4 593 74.5
BolC9t59595H Brassica oleracea HOM05D004337 ORTHO05D005422 3.3e-264 914.8 600 74.7
FAN26G1467 Fragaria x ananassa HOM05D004337 ORTHO05D005422 3.3e-264 914.8 618 72.8
BraA10t44874Z Brassica rapa HOM05D004337 ORTHO05D005422 4.3e-264 914.4 602 74.8
COL.COLO4_33529 Corchorus olitorius HOM05D004337 ORTHO05D005422 4.3e-264 914.4 566 78.3
C09p68510 Brassica napus HOM05D004337 ORTHO05D005422 5.6e-264 914.1 599 74.6
Thhalv10013045m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 9.5e-264 913.3 596 75.8
SGA_v2.0_scaffold51G18842 Striga asiatica HOM05D004337 ORTHO05D005422 1.2e-263 912.9 570 79.5
Phvul.009G159800 Phaseolus vulgaris HOM05D004337 ORTHO05D005422 1.6e-263 912.5 595 75.6
Lsat_1_v5_gn_2_40441 Lactuca sativa HOM05D004337 ORTHO05D005422 2.8e-263 911.8 593 75.4
Glyma.06G161400 Glycine max HOM05D004337 ORTHO05D005422 3.6e-263 911.4 583 76.7
Medtr3g098210 Medicago truncatula HOM05D004337 ORTHO05D005422 4.7e-263 911.0 594 75.1
AL6G19170 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 8.9e-262 906.7 593 75.2
CARHR204490 Cardamine hirsuta HOM05D004337 ORTHO05D005422 1.5e-261 906.0 599 75.3
PSO761G0180 Papaver somniferum HOM05D004337 ORTHO05D005422 1.5e-261 906.0 595 73.8
Aa31LG11G2980 Aethionema arabicum HOM05D004337 ORTHO05D005422 2.0e-261 905.6 594 72.7
Lj4A821G42 Lonicera japonica HOM05D004337 ORTHO05D005422 2.6e-261 905.2 554 79.6
CARHR189960 Cardamine hirsuta HOM05D004337 ORTHO05D005422 5.8e-261 904.0 596 73.2
Nn5g27210 Nelumbo nucifera HOM05D004337 ORTHO05D005422 7.5e-261 903.7 543 80.7
BcaB08g37252 Brassica carinata HOM05D004337 ORTHO05D005422 1.3e-260 902.9 602 74.3
A10p28250 Brassica napus HOM05D004337 ORTHO05D005422 2.2e-260 902.1 601 74.0
PSO210G2848 Papaver somniferum HOM05D004337 ORTHO05D005422 6.4e-260 900.6 601 72.5
Carub.0006s0742 Capsella rubella HOM05D004337 ORTHO05D005422 8.3e-260 900.2 593 75.0
Thhalv10003872m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 1.9e-259 899.0 597 72.5
DCAR_009619 Daucus carota HOM05D004337 ORTHO05D005422 3.2e-259 898.3 608 74.5
Ca_17042_v3 Cicer arietinum L. HOM05D004337 ORTHO05D005422 5.4e-259 897.5 590 75.3
Os04g0441900 Oryza sativa ssp. japonica HOM05D004337 ORTHO05D005422 9.2e-259 896.7 563 75.8
arahy.Tifrunner.gnm1.ann1.397MFZ Arachis hypogaea HOM05D004337 ORTHO05D005422 1.2e-258 896.3 607 73.6
Zm00001eb082160 Zea mays HOM05D004337 ORTHO05D005422 1.6e-258 896.0 580 74.7
HPP92_009218 Vanilla planifolia HOM05D004337 ORTHO05D005422 2.3e-257 892.1 592 73.8
ATR1089G072 Amborella trichopoda HOM05D004337 ORTHO05D005422 1.1e-256 889.8 573 74.9
ECA238G0122 Erigeron canadensis HOM05D004337 ORTHO05D005422 1.9e-256 889.0 599 73.3
AL6G34865 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 3.3e-256 888.3 595 72.4
AT5G23575 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 9.5e-256 886.7 595 72.3
BcaB04g19858 Brassica carinata HOM05D004337 ORTHO05D005422 9.5e-256 886.7 597 72.2
Zm00001eb422980 Zea mays HOM05D004337 ORTHO05D005422 2.1e-255 885.6 596 72.0
BraA09t36334Z Brassica rapa HOM05D004337 ORTHO05D005422 4.7e-255 884.4 594 72.6
A09p06870 Brassica napus HOM05D004337 ORTHO05D005422 8.1e-255 883.6 598 71.7
Aa31LG3G18040 Aethionema arabicum HOM05D004337 ORTHO05D005422 1.1e-254 883.2 583 74.8
A06p34530 Brassica napus HOM05D004337 ORTHO05D005422 3.1e-254 881.7 598 71.2
C09p07600 Brassica napus HOM05D004337 ORTHO05D005422 3.1e-254 881.7 598 71.6
BraA06t26382Z Brassica rapa HOM05D004337 ORTHO05D005422 5.2e-254 880.9 598 71.2
Sp2g23620 Schrenkiella parvula HOM05D004337 ORTHO05D005422 5.2e-254 880.9 599 71.5
Carub.0006s2135 Capsella rubella HOM05D004337 ORTHO05D005422 1.2e-253 879.8 597 71.7
C07p43970 Brassica napus HOM05D004337 ORTHO05D005422 2.2e-252 875.5 600 71.2
BolC9t53677H Brassica oleracea HOM05D004337 ORTHO05D005422 2.9e-252 875.2 600 71.0
BcaC04g23504 Brassica carinata HOM05D004337 ORTHO05D005422 3.7e-252 874.8 601 70.9
BolC7t44925H Brassica oleracea HOM05D004337 ORTHO05D005422 4.9e-252 874.4 597 71.4
HanXRQChr10g0285831 Helianthus annuus HOM05D004337 ORTHO05D005422 4.9e-252 874.4 545 76.7
Peaxi162Scf00651g00114 Petunia axillaris HOM05D004337 ORTHO05D005422 8.3e-252 873.6 593 74.0
Dinv10851 Davidia involucrata HOM05D004337 ORTHO05D005422 6.6e-249 864.0 527 80.5
Sp6g34400 Schrenkiella parvula HOM05D004337 ORTHO05D005422 1.6e-242 842.8 604 71.0
vmacro12739 Vaccinium macrocarpon HOM05D004337 ORTHO05D005422 1.6e-242 842.8 927 51.9
AT5G08500 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 6.2e-239 830.9 519 77.8
CSS0021638 Camellia sinensis var. sinensis HOM05D004337 ORTHO05D005422 8.4e-236 820.5 496 79.8
SMO116G0204 Selaginella moellendorffii HOM05D004337 ORTHO05D005422 1.3e-233 813.1 555 69.4
Mapoly0020s0073 Marchantia polymorpha HOM05D004337 ORTHO05D005422 3.9e-233 811.6 588 67.3
AL6G18970 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 4.2e-227 791.6 887 50.4
Duzib264G1201 Durio zibethinus HOM05D004337 ORTHO05D005422 2.3e-217 759.2 566 67.1
Pp3c5_10010 Physcomitrium patens HOM05D004337 ORTHO05D005422 4.5e-213 745.0 582 62.9
Gohir.D12G002000 Gossypium hirsutum HOM05D004337 ORTHO05D005422 1.9e-211 739.6 566 65.9
Cc00_g00820 Coffea canephora HOM05D004337 ORTHO05D005422 4.3e-208 728.4 411 85.9
Ah.06g188230 Amaranthus hybridus HOM05D004337 ORTHO05D005422 4.5e-205 718.4 530 67.7
CBR_g44530 Chara braunii HOM05D004337 ORTHO05D005422 6.1e-194 681.4 565 57.5
CDE05G2996 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 2.4e-182 642.9 463 68.9
Haze_19353 Corylus avellana HOM05D004337 ORTHO05D005422 4.4e-176 622.1 340 87.6
AL6G18990 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 3.6e-170 602.4 433 71.1
SHI38349 Sapria himalayana HOM05D004337 ORTHO05D005422 1.8e-158 563.5 419 69.5
Cre09.g397900 Chlamydomonas reinhardtii HOM05D004337 ORTHO05D005422 4.9e-151 538.9 574 47.6
ClCG04G002690 Citrullus lanatus HOM05D004337 ORTHO05D005422 1.1e-145 521.2 307 83.4
AL6G19200 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 2.6e-136 490.0 444 61.5
MCO10G243 Micromonas commoda HOM05D004337 ORTHO05D005422 1.5e-123 447.6 351 61.8
PRCOL_00006172 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 1.4e-102 377.9 629 37.8
Haze_27034 Corylus avellana HOM05D004337 ORTHO05D005422 5.5e-102 375.9 410 46.1
Cfa024513 Carpinus fangiana HOM05D004337 ORTHO05D005422 1.3e-92 344.7 511 37.2
Cpa.g.sc3593.1 Carica papaya HOM05D004337 ORTHO05D005422 6.9e-89 332.4 188 85.1
Cpa.g.sc138.38 Carica papaya HOM05D004337 ORTHO05D005422 8.8e-84 315.5 252 63.1
Haze_19352 Corylus avellana HOM05D004337 ORTHO05D005422 4.8e-82 309.7 227 67.8
MCO07G426 Micromonas commoda HOM05D004337 ORTHO05D005422 6.9e-81 305.8 605 33.4
AL6G19020 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 7.9e-77 292.4 214 68.2
SalBow8G1257 Salvia bowleyana HOM05D004337 ORTHO05D005422 2.2e-74 284.3 214 65.4
SalBow8G3722 Salvia bowleyana HOM05D004337 ORTHO05D005422 2.2e-74 284.3 214 65.4
PRCOL_00005640 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 5.2e-68 263.1 366 37.4
Cc00_g00810 Coffea canephora HOM05D004337 ORTHO05D005422 1.1e-65 255.4 170 72.4
ClCG04G002680 Citrullus lanatus HOM05D004337 ORTHO05D005422 4.7e-61 240.0 166 69.3
HPP92_009290 Vanilla planifolia HOM05D004337 ORTHO05D005422 4.1e-49 200.3 230 48.3
CDE05G3583 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 4.7e-45 186.8 109 85.3
Hma1.2p1_0641F.1_g194250 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 1.9e-30 138.3 72 90.3
Psat3g077400 Pisum sativum HOM05D004337 ORTHO05D005422 7.3e-30 136.3 110 60.0
BcaC04g21668 Brassica carinata HOM05D004337 ORTHO05D021976 1.3e-23 115.5 157 47.1
C09p29160 Brassica napus HOM05D004337 ORTHO05D021976 1.3e-23 115.5 157 47.1
Hma1.2p1_0641F.1_g194230 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 3.4e-19 100.9 105 56.2
SEGI_12766 Sequoiadendron giganteum HOM05D004337 ORTHO05D005422 3.9e-15 87.4 42 90.5
AUR62044487 Chenopodium quinoa HOM05D004337 ORTHO05D021976 9.9e-11 72.8 49 65.3
AUR62044516 Chenopodium quinoa HOM05D004337 ORTHO05D021976 9.9e-11 72.8 49 65.3
SHI11402 Sapria himalayana HOM05D000039 ORTHO05D006865 2.9e-10 71.2 48 68.8
AUR62038356 Chenopodium quinoa HOM05D001477 ORTHO05D021976 9.3e-09 66.2 43 69.8
CDE05G0837 Ceratophyllum demersum HOM05D004337 ORTHO05D043897 1.1e-06 59.3 71 47.9


User provided reference genes

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