Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044836.1 Olea europaea HOM05D004883 ORTHO05D005766 5.3e-63 244.2 125 100.0
Oeu057282.1 Olea europaea HOM05D004883 ORTHO05D005766 3.2e-60 235.0 125 94.4
Migut.N02708 Erythranthe guttata HOM05D004883 ORTHO05D005766 2.2e-56 222.2 125 88.8
Migut.C00579 Erythranthe guttata HOM05D004883 ORTHO05D005766 8.2e-56 220.3 125 88.0
SalBow7G2082 Salvia bowleyana HOM05D004883 ORTHO05D005766 1.4e-55 219.5 122 90.2
SalBow3G1199 Salvia bowleyana HOM05D004883 ORTHO05D005766 3.1e-55 218.4 122 91.0
MSTRG.1348 Avicennia marina HOM05D004883 ORTHO05D005766 2.0e-54 215.7 125 86.4
Rhsim07G0228400 Rhododendron simsii HOM05D004883 ORTHO05D005766 2.0e-54 215.7 125 83.2
Actinidia38058 Actinidia chinensis HOM05D004883 ORTHO05D005766 4.5e-54 214.5 125 84.8
vmacro04449 Vaccinium macrocarpon HOM05D004883 ORTHO05D005766 5.9e-54 214.2 125 83.2
Dinv35960 Davidia involucrata HOM05D004883 ORTHO05D005766 1.3e-53 213.0 125 83.2
Solyc04g078920.3 Solanum lycopersicum HOM05D004883 ORTHO05D005766 1.3e-53 213.0 122 84.4
PGSC0003DMG400007973 Solanum tuberosum HOM05D004883 ORTHO05D005766 1.3e-53 213.0 122 85.2
Sopen04g032520 Solanum pennellii HOM05D004883 ORTHO05D005766 2.9e-53 211.8 122 84.4
CSS0025959 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 8.5e-53 210.3 125 81.6
CSS0031938 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 8.5e-53 210.3 125 81.6
GSVIVG01009495001 Vitis vinifera HOM05D004883 ORTHO05D005766 1.1e-52 209.9 125 81.6
Peaxi162Scf00010g00308 Petunia axillaris HOM05D004883 ORTHO05D005766 2.5e-52 208.8 126 83.3
TAR381G1103 Trochodendron aralioides HOM05D004883 ORTHO05D005766 3.2e-52 208.4 125 81.6
Cc10_g04160 Coffea canephora HOM05D004883 ORTHO05D005766 5.5e-52 207.6 122 82.8
Hma1.2p1_0982F.1_g244010 Hydrangea macrophylla HOM05D004883 ORTHO05D005766 3.6e-51 204.9 125 79.2
Atru.chr13.693 Acer truncatum HOM05D004883 ORTHO05D005766 4.0e-50 201.4 125 77.6
Cpa.g.sc49.21 Carica papaya HOM05D004883 ORTHO05D005766 4.0e-50 201.4 122 80.3
ECA232G2590 Erigeron canadensis HOM05D004883 ORTHO05D005766 1.5e-49 199.5 125 78.4
Ciclev10002854m.g Citrus clementina HOM05D004883 ORTHO05D005766 2.0e-49 199.1 125 77.6
CiPaw.16G043800 Carya illinoinensis HOM05D004883 ORTHO05D005766 2.6e-49 198.7 123 78.9
HanXRQChr14g0439621 Helianthus annuus HOM05D004883 ORTHO05D005766 3.3e-49 198.4 122 77.9
Lsat_1_v5_gn_4_125820 Lactuca sativa HOM05D004883 ORTHO05D005766 4.4e-49 198.0 122 80.3
Hund21302 Selenicereus undatus HOM05D004883 ORTHO05D005766 4.4e-49 198.0 119 79.8
DCAR_020929 Daucus carota HOM05D004883 ORTHO05D005766 7.5e-49 197.2 125 78.4
HanXRQChr05g0150871 Helianthus annuus HOM05D004883 ORTHO05D005766 7.5e-49 197.2 122 77.9
MD15G1083000 Malus domestica HOM05D004883 ORTHO05D005766 7.5e-49 197.2 125 78.4
Prupe.1G435500 Prunus persica HOM05D004883 ORTHO05D005766 7.5e-49 197.2 125 77.6
Sc02g0007090 Simmondsia chinensis HOM05D004883 ORTHO05D005766 1.3e-48 196.4 125 76.8
COL.COLO4_26509 Corchorus olitorius HOM05D004883 ORTHO05D005766 1.7e-48 196.1 125 78.4
PGR031G0707 Punica granatum HOM05D004883 ORTHO05D005766 2.8e-48 195.3 120 76.7
QL02p004805 Quercus lobata HOM05D004883 ORTHO05D005766 3.7e-48 194.9 124 77.4
arahy.Tifrunner.gnm1.ann1.09A9GY Arachis hypogaea HOM05D004883 ORTHO05D005766 4.8e-48 194.5 124 76.6
arahy.Tifrunner.gnm1.ann1.B0E7W8 Arachis hypogaea HOM05D004883 ORTHO05D005766 4.8e-48 194.5 124 76.6
DCAR_012777 Daucus carota HOM05D004883 ORTHO05D005766 4.8e-48 194.5 119 79.8
AUR62012534 Chenopodium quinoa HOM05D004883 ORTHO05D005766 1.1e-47 193.4 126 76.2
Gorai.002G132400 Gossypium raimondii HOM05D004883 ORTHO05D005766 1.1e-47 193.4 122 75.4
PSO210G0389 Papaver somniferum HOM05D004883 ORTHO05D005766 1.4e-47 193.0 125 80.0
FvH4_2g34441 Fragaria vesca HOM05D004883 ORTHO05D005766 1.8e-47 192.6 125 76.0
PSO170G5588 Papaver somniferum HOM05D004883 ORTHO05D005766 1.8e-47 192.6 125 80.0
Ah.09g236860 Amaranthus hybridus HOM05D004883 ORTHO05D005766 3.1e-47 191.8 123 74.0
EL10Ac8g19960 Beta vulgaris HOM05D004883 ORTHO05D005766 3.1e-47 191.8 126 75.4
AUR62014661 Chenopodium quinoa HOM05D004883 ORTHO05D005766 3.1e-47 191.8 126 75.4
AUR62044174 Chenopodium quinoa HOM05D004883 ORTHO05D005766 3.1e-47 191.8 126 75.4
Gohir.D01G108200 Gossypium hirsutum HOM05D004883 ORTHO05D005766 3.1e-47 191.8 121 75.2
Lsat_1_v5_gn_6_112040 Lactuca sativa HOM05D004883 ORTHO05D005766 3.1e-47 191.8 121 76.9
ECA246G2602 Erigeron canadensis HOM05D004883 ORTHO05D005766 4.1e-47 191.4 125 76.0
FAN20G2534 Fragaria x ananassa HOM05D004883 ORTHO05D005766 4.1e-47 191.4 125 75.2
Nn1g04858 Nelumbo nucifera HOM05D004883 ORTHO05D005766 4.1e-47 191.4 125 76.0
Lalb_Chr22g0355131 Lupinus albus HOM05D004883 ORTHO05D005766 5.3e-47 191.0 125 74.4
Medtr1g019430 Medicago truncatula HOM05D004883 ORTHO05D005766 5.3e-47 191.0 123 77.2
Haze_17525 Corylus avellana HOM05D004883 ORTHO05D005766 7.0e-47 190.7 126 77.0
Gorai.009G211700 Gossypium raimondii HOM05D004883 ORTHO05D005766 7.0e-47 190.7 125 76.0
Gohir.A01G119900 Gossypium hirsutum HOM05D004883 ORTHO05D005766 9.1e-47 190.3 122 73.8
Thecc.08G007300 Theobroma cacao HOM05D004883 ORTHO05D005766 9.1e-47 190.3 125 75.2
Lj5g0012185 Lotus japonicus HOM05D004883 ORTHO05D005766 1.2e-46 189.9 124 75.0
FAN27G2225 Fragaria x ananassa HOM05D004883 ORTHO05D005766 1.6e-46 189.5 124 74.2
BcaC04g21964 Brassica carinata HOM05D004883 ORTHO05D005766 2.0e-46 189.1 122 75.4
BcaC06g31741 Brassica carinata HOM05D004883 ORTHO05D005766 2.0e-46 189.1 122 75.4
A09p20040 Brassica napus HOM05D004883 ORTHO05D005766 2.0e-46 189.1 122 75.4
C09p25420 Brassica napus HOM05D004883 ORTHO05D005766 2.0e-46 189.1 122 75.4
BolC9t55441H Brassica oleracea HOM05D004883 ORTHO05D005766 2.0e-46 189.1 122 75.4
BraA09t37617Z Brassica rapa HOM05D004883 ORTHO05D005766 2.0e-46 189.1 122 75.4
Gohir.D05G205400 Gossypium hirsutum HOM05D004883 ORTHO05D005766 2.0e-46 189.1 125 76.0
Phvul.001G022000 Phaseolus vulgaris HOM05D004883 ORTHO05D005766 2.0e-46 189.1 125 74.4
MD08G1101600 Malus domestica HOM05D004883 ORTHO05D005766 2.7e-46 188.7 125 75.2
AL8G18060 Arabidopsis lyrata HOM05D004883 ORTHO05D005766 3.5e-46 188.3 125 76.0
AT5G42890 Arabidopsis thaliana HOM05D004883 ORTHO05D005766 3.5e-46 188.3 125 75.2
BcaB07g31037 Brassica carinata HOM05D004883 ORTHO05D005766 3.5e-46 188.3 122 74.6
VMungo0647G0758 Vigna mungo HOM05D004883 ORTHO05D005766 3.5e-46 188.3 125 74.4
Carub.0008s0602 Capsella rubella HOM05D004883 ORTHO05D005766 4.5e-46 188.0 121 75.2
Eucgr.F02346 Eucalyptus grandis HOM05D004883 ORTHO05D005766 7.7e-46 187.2 155 63.9
Thhalv10003291m.g Eutrema salsugineum HOM05D004883 ORTHO05D005766 7.7e-46 187.2 119 76.5
Glyma.14G082800 Glycine max HOM05D004883 ORTHO05D005766 7.7e-46 187.2 123 74.0
Sp2g07620 Schrenkiella parvula HOM05D004883 ORTHO05D005766 7.7e-46 187.2 122 74.6
Psat1g147680 Pisum sativum HOM05D004883 ORTHO05D005766 1.0e-45 186.8 125 73.6
THA.LOC104822849 Tarenaya hassleriana HOM05D004883 ORTHO05D005766 1.3e-45 186.4 122 75.4
CARHR181250 Cardamine hirsuta HOM05D004883 ORTHO05D005766 2.2e-45 185.7 122 74.6
TPR.G3781 Trifolium pratense HOM05D004883 ORTHO05D005766 2.2e-45 185.7 123 75.6
THA.LOC104814168 Tarenaya hassleriana HOM05D004883 ORTHO05D005766 3.8e-45 184.9 122 74.6
CDE08G1634 Ceratophyllum demersum HOM05D004883 ORTHO05D005766 6.5e-45 184.1 120 75.0
Glyma.17G242300 Glycine max HOM05D004883 ORTHO05D005766 6.5e-45 184.1 123 73.2
Os06g0211300 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 6.5e-45 184.1 123 73.2
Duzib093G0126 Durio zibethinus HOM05D004883 ORTHO05D005766 8.5e-45 183.7 110 79.1
FvH4_2g34440 Fragaria vesca HOM05D004883 ORTHO05D005766 8.5e-45 183.7 125 72.0
RcHm_v2.0_Chr6g0307931 Rosa chinensis HOM05D004883 ORTHO05D005766 8.5e-45 183.7 125 72.0
Aa31LG9G12950 Aethionema arabicum HOM05D004883 ORTHO05D005766 1.1e-44 183.3 125 75.2
ATR1102G009 Amborella trichopoda HOM05D004883 ORTHO05D005766 1.1e-44 183.3 122 75.4
Ca_13291_v3 Cicer arietinum L. HOM05D004883 ORTHO05D005766 3.2e-44 181.8 125 70.4
Sed0005554 Sechium edule HOM05D004883 ORTHO05D005766 3.2e-44 181.8 119 71.4
Nitab4.5_0000287g0320 Nicotiana tabacum HOM05D004883 ORTHO05D005766 3.6e-43 178.3 123 74.8
Aqoxy5G01236 Aquilegia oxysepala HOM05D004883 ORTHO05D005766 4.7e-43 177.9 125 72.0
Gohir.A05G202300 Gossypium hirsutum HOM05D004883 ORTHO05D005766 4.7e-43 177.9 109 78.0
Gohir.D06G016900 Gossypium hirsutum HOM05D004883 ORTHO05D005766 4.7e-43 177.9 120 70.8
Gorai.010G019800 Gossypium raimondii HOM05D004883 ORTHO05D005766 4.7e-43 177.9 120 70.8
ClCG05G019880 Citrullus lanatus HOM05D004883 ORTHO05D005766 8.0e-43 177.2 127 67.7
Nitab4.5_0003118g0020 Nicotiana tabacum HOM05D004883 ORTHO05D005766 1.8e-42 176.0 122 74.6
CsaV3_4G034310 Cucumis sativus L. HOM05D004883 ORTHO05D005766 3.0e-42 175.3 127 66.1
TWI36G0538 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 3.0e-42 175.3 125 70.4
TWI56G0859 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 3.0e-42 175.3 125 69.6
Os02g0765800 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 6.8e-42 174.1 121 68.6
TWI56G0476 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 1.2e-41 173.3 125 68.0
Mapoly0033s0053 Marchantia polymorpha HOM05D004883 ORTHO05D005766 1.5e-41 172.9 124 69.4
CSS0006435 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 9.8e-41 170.2 124 69.4
MELO3C016751.2 Cucumis melo HOM05D004883 ORTHO05D005766 1.7e-40 169.5 133 63.9
Hund23571 Selenicereus undatus HOM05D004883 ORTHO05D005766 1.7e-40 169.5 123 64.2
Duzib041G0234 Durio zibethinus HOM05D004883 ORTHO05D005766 4.8e-40 167.9 125 70.4
Manes.05G174000 Manihot esculenta HOM05D004883 ORTHO05D005766 4.8e-40 167.9 122 65.6
SEGI_37934 Sequoiadendron giganteum HOM05D004883 ORTHO05D005766 4.8e-40 167.9 121 67.8
Sabra02G0098900 Salix brachista HOM05D004883 ORTHO05D005766 4.1e-39 164.9 122 63.9
Pp3c24_4700 Physcomitrium patens HOM05D004883 ORTHO05D005766 5.4e-39 164.5 125 66.4
Potri.002G126200 Populus trichocarpa HOM05D004883 ORTHO05D005766 3.5e-38 161.8 122 61.5
SMO169G0122 Selaginella moellendorffii HOM05D004883 ORTHO05D005766 5.9e-38 161.0 125 63.2
MBI06_g02552_MAGBIO Magnolia biondii HOM05D004883 ORTHO05D005766 3.8e-37 158.3 124 66.1
Potri.014G029300 Populus trichocarpa HOM05D004883 ORTHO05D005766 1.1e-36 156.8 122 61.5
MD00G1215600 Malus domestica HOM05D004883 ORTHO05D005766 9.5e-36 153.7 105 72.4
Sabra14G0020100 Salix brachista HOM05D004883 ORTHO05D005766 9.5e-36 153.7 122 59.8
TAR625G0321 Trochodendron aralioides HOM05D004883 ORTHO05D005766 1.2e-35 153.3 97 78.4
C03p39670 Brassica napus HOM05D004883 ORTHO05D005766 4.7e-35 151.4 108 71.3
HPP92_013338 Vanilla planifolia HOM05D004883 ORTHO05D005766 1.2e-33 146.7 129 61.2
Manes.18G037300 Manihot esculenta HOM05D004883 ORTHO05D005766 3.4e-33 145.2 122 57.4
Peaxi162Scf00252g00711 Petunia axillaris HOM05D004883 ORTHO05D005766 7.5e-33 144.1 123 63.4
CANSAT35G0766 Cannabis sativa HOM05D004883 ORTHO05D005766 8.3e-32 140.6 121 55.4
BcaC09g50201 Brassica carinata HOM05D004883 ORTHO05D005766 3.1e-31 138.7 110 62.7
CAN.G1139.16 Capsicum annuum HOM05D004883 ORTHO05D005766 9.2e-31 137.1 90 72.2
FAN15G1199 Fragaria x ananassa HOM05D004883 ORTHO05D005766 3.3e-28 128.6 83 73.5
AagrBONN_evm.TU.Sc2ySwM_344.1976 Anthoceros agrestis HOM05D004883 ORTHO05D005766 3.6e-27 125.2 123 50.4
CAN.G371.3 Capsicum annuum HOM05D004883 ORTHO05D005766 3.0e-26 122.1 123 56.1
Nn5g30317 Nelumbo nucifera HOM05D004883 ORTHO05D005766 1.3e-24 116.7 125 54.4
EL10Ac4g09184 Beta vulgaris HOM05D004883 ORTHO05D005766 2.9e-24 115.5 121 54.5
Actinidia29871 Actinidia chinensis HOM05D004883 ORTHO05D005766 4.9e-24 114.8 62 88.7
EL10Ac7g17187 Beta vulgaris HOM05D004883 ORTHO05D005766 8.3e-24 114.0 83 68.7
BcaC01g04518 Brassica carinata HOM05D004883 ORTHO05D005766 5.4e-23 111.3 82 70.7
Lj4A58G20 Lonicera japonica HOM05D000983 ORTHO05D005766 3.5e-22 108.6 60 83.3
Os01g0357200 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 3.5e-22 108.6 85 63.5
BolC9t59992H Brassica oleracea HOM05D004883 ORTHO05D005766 7.8e-22 107.5 100 58.0
Gohir.A06G018633 Gossypium hirsutum HOM05D004883 ORTHO05D005766 2.1e-19 99.4 93 53.8
BolC1t02723H Brassica oleracea HOM05D004883 ORTHO05D005766 6.8e-18 94.4 67 67.2
unitig_32.g11126 Utricularia gibba HOM05D004883 ORTHO05D005766 3.7e-16 88.6 63 69.8
RcHm_v2.0_Chr5g0032801 Rosa chinensis HOM05D004883 ORTHO05D005766 2.1e-14 82.8 75 60.0
C01p27920 Brassica napus HOM05D004883 ORTHO05D005766 8.6e-13 77.4 103 47.6
PRCOL_00003255 Prasinoderma coloniale HOM05D004883 ORTHO05D005766 8.9e-10 67.4 113 36.3
C09p72490 Brassica napus HOM05D004883 ORTHO05D005766 2.6e-09 65.9 47 66.0
MELO3C033382.2 Cucumis melo HOM05D004883 ORTHO05D005766 2.4e-07 59.3 40 65.0
Cre14.g633550 Chlamydomonas reinhardtii HOM05D004883 ORTHO05D005766 9.2e-07 57.4 110 36.4
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 7.8e-06 54.3 112 36.6


User provided reference genes

Program Settings