Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 2.8e-193 678.3 320 100.0
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 2.3e-155 552.4 318 79.6
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 5.8e-154 547.7 318 79.2
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.1e-149 533.5 319 75.2
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 2.5e-149 532.3 317 76.7
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 2.8e-148 528.9 317 75.1
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 2.3e-147 525.8 316 75.3
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 2.3e-147 525.8 319 74.9
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 3.1e-147 525.4 312 75.3
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 4.0e-147 525.0 317 75.4
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 5.2e-147 524.6 322 76.4
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.2e-146 523.5 317 75.1
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 9.8e-146 520.4 317 74.8
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 2.2e-145 519.2 317 73.2
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 2.9e-145 518.8 319 73.4
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 2.9e-145 518.8 318 74.8
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 6.4e-145 517.7 318 74.5
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 6.4e-145 517.7 313 74.1
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.1e-144 516.9 317 74.4
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 3.2e-144 515.4 318 74.2
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 3.2e-144 515.4 317 74.1
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 5.4e-144 514.6 319 73.7
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 2.1e-143 512.7 318 73.3
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 1.0e-142 510.4 319 73.4
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 1.0e-142 510.4 321 72.3
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 1.3e-142 510.0 317 73.2
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 2.3e-142 509.2 318 73.3
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 6.6e-142 507.7 318 72.6
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 6.6e-142 507.7 317 73.2
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 8.6e-142 507.3 317 73.2
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 1.5e-141 506.5 318 72.0
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 1.5e-141 506.5 320 73.1
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 2.5e-141 505.8 318 73.3
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 2.5e-141 505.8 318 73.3
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 2.5e-141 505.8 317 71.6
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 3.3e-141 505.4 311 74.9
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 9.5e-141 503.8 296 76.0
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.2e-140 503.4 318 72.6
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 2.1e-140 502.7 318 71.1
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 2.1e-140 502.7 321 71.3
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 4.7e-140 501.5 319 73.0
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 4.7e-140 501.5 318 72.6
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 6.2e-140 501.1 318 72.0
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 8.1e-140 500.7 318 72.0
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 8.1e-140 500.7 319 71.5
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 2.3e-139 499.2 316 71.5
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 5.2e-139 498.0 319 71.5
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 5.2e-139 498.0 318 71.1
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 6.8e-139 497.7 320 70.6
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 8.9e-139 497.3 318 72.0
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 8.9e-139 497.3 318 72.0
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 1.2e-138 496.9 318 71.1
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 1.5e-138 496.5 318 71.1
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 7.6e-138 494.2 320 70.6
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 2.2e-137 492.7 319 71.8
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 3.8e-137 491.9 320 69.1
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.9e-137 491.5 317 71.3
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 5.4e-136 488.0 312 69.2
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 9.2e-136 487.3 321 71.0
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 1.2e-135 486.9 321 69.5
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 2.7e-135 485.7 315 70.8
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 3.5e-135 485.3 319 70.5
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 3.5e-135 485.3 319 70.2
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 3.5e-135 485.3 320 70.0
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 1.3e-134 483.4 319 69.0
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 1.3e-134 483.4 321 70.1
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.7e-134 483.0 316 69.3
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 1.7e-134 483.0 321 68.2
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 2.3e-134 482.6 316 69.6
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 3.0e-134 482.3 318 69.2
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 3.0e-134 482.3 321 68.8
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 3.0e-134 482.3 321 69.2
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 3.0e-134 482.3 306 71.6
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 3.9e-134 481.9 316 69.9
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 5.1e-134 481.5 306 71.6
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 6.6e-134 481.1 321 67.9
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 1.5e-133 479.9 320 69.7
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 1.9e-133 479.6 321 67.6
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 1.9e-133 479.6 322 69.3
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.5e-133 479.2 319 68.3
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 3.3e-133 478.8 320 69.7
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 4.3e-133 478.4 318 69.2
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 9.6e-133 477.2 321 66.0
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 9.6e-133 477.2 305 71.8
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 1.6e-132 476.5 316 68.7
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 4.7e-132 474.9 314 69.4
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 4.7e-132 474.9 305 71.5
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 6.2e-132 474.6 318 69.2
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 1.1e-131 473.8 315 68.9
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.8e-131 473.0 320 68.4
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.8e-131 473.0 319 68.7
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 2.4e-131 472.6 306 70.6
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 4.0e-131 471.9 318 68.2
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 4.0e-131 471.9 321 67.0
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.5e-130 469.9 321 67.9
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 3.4e-130 468.8 318 67.0
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 7.6e-130 467.6 318 67.9
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 1.3e-129 466.8 319 65.8
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 6.4e-129 464.5 317 67.5
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 6.4e-129 464.5 288 74.0
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 1.9e-128 463.0 307 69.1
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 2.1e-127 459.5 303 68.3
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.7e-127 459.1 308 69.2
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 3.5e-127 458.8 288 72.6
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 4.6e-127 458.4 309 67.3
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 1.3e-126 456.8 308 69.5
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 2.3e-126 456.1 307 64.8
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.9e-126 455.3 288 71.9
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 8.7e-126 454.1 318 63.2
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 1.5e-125 453.4 308 65.9
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 5.6e-125 451.4 309 65.4
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 1.3e-124 450.3 303 67.0
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 1.6e-124 449.9 318 61.9
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 2.8e-124 449.1 303 66.0
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 2.8e-124 449.1 304 67.8
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 2.8e-124 449.1 293 70.3
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 1.1e-123 447.2 303 66.7
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 1.4e-123 446.8 303 66.7
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 1.8e-123 446.4 318 65.7
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 1.8e-123 446.4 304 67.4
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 5.3e-123 444.9 313 65.2
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 4.5e-122 441.8 304 66.8
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 4.5e-122 441.8 304 66.8
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 8.4e-121 437.6 316 65.8
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 3.1e-115 419.1 274 69.0
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 2.6e-114 416.0 320 60.9
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 4.5e-114 415.2 304 64.1
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 1.3e-113 413.7 317 62.5
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 9.3e-112 407.5 310 59.7
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 3.5e-111 405.6 318 59.1
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 6.0e-111 404.8 316 57.9
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 4.3e-109 398.7 302 63.6
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 8.1e-108 394.4 315 61.0
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 4.0e-107 392.1 312 56.7
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 3.0e-102 375.9 318 54.1
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.3e-100 370.5 321 57.3
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.3e-100 370.5 321 57.3
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 8.2e-100 367.9 305 55.7
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 7.2e-96 354.8 216 72.7
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 1.8e-94 350.1 223 69.1
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 6.5e-89 331.6 307 53.4
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 8.5e-89 331.3 309 52.1
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 5.2e-78 295.4 267 55.1
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 5.5e-72 275.4 305 47.5
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 5.3e-67 258.8 181 66.9
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.7e-65 253.8 260 50.4
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 7.3e-48 195.3 134 70.1
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.4e-43 180.3 126 60.3
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.2e-43 179.9 117 70.1
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 1.4e-38 164.5 322 32.3
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 3.4e-37 159.8 300 32.3
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 1.4e-30 137.9 235 36.2
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 8.3e-28 128.6 340 27.4
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.2e-26 124.8 97 58.8
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 1.6e-15 87.8 61 67.2
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 6.9e-14 82.4 77 53.2


User provided reference genes

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