Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 1.8e-50 202.2 97 100.0
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 2.5e-20 102.1 52 90.4
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 9.0e-18 93.6 79 60.8
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 1.7e-16 89.4 79 60.8
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 2.2e-16 89.0 80 58.8
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 2.2e-16 89.0 80 58.8
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 2.2e-16 89.0 80 58.8
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 2.2e-16 89.0 80 58.8
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 2.2e-16 89.0 80 58.8
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 2.9e-16 88.6 79 58.2
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 2.9e-16 88.6 114 46.5
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 3.8e-16 88.2 79 57.0
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 3.8e-16 88.2 80 57.5
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 3.8e-16 88.2 79 57.0
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 4.9e-16 87.8 80 56.2
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 4.9e-16 87.8 79 58.2
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 4.9e-16 87.8 80 57.5
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 6.5e-16 87.4 80 57.5
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 6.5e-16 87.4 80 57.5
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 6.5e-16 87.4 80 57.5
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 6.5e-16 87.4 80 57.5
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 6.5e-16 87.4 80 57.5
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 6.5e-16 87.4 79 57.0
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 6.5e-16 87.4 79 57.0
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 6.5e-16 87.4 79 57.0
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 6.5e-16 87.4 79 57.0
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 8.4e-16 87.0 80 56.2
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 8.4e-16 87.0 80 56.2
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 8.4e-16 87.0 79 58.2
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 8.4e-16 87.0 79 55.7
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 1.1e-15 86.7 80 55.0
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 1.1e-15 86.7 79 57.0
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 1.1e-15 86.7 79 57.0
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 1.1e-15 86.7 79 57.0
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 1.1e-15 86.7 80 56.2
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 1.1e-15 86.7 79 59.5
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 1.1e-15 86.7 79 55.7
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 1.1e-15 86.7 79 57.0
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.4e-15 86.3 79 57.0
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 1.4e-15 86.3 79 58.2
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 1.4e-15 86.3 80 56.2
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.4e-15 86.3 79 55.7
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 1.4e-15 86.3 79 55.7
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 1.4e-15 86.3 79 55.7
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 1.9e-15 85.9 80 55.0
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 1.9e-15 85.9 79 57.0
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 1.9e-15 85.9 79 57.0
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 2.5e-15 85.5 79 55.7
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 2.5e-15 85.5 89 51.7
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 2.5e-15 85.5 79 57.0
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 2.5e-15 85.5 79 57.0
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 3.2e-15 85.1 79 57.0
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 3.2e-15 85.1 79 55.7
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 3.2e-15 85.1 79 54.4
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 3.2e-15 85.1 79 54.4
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 4.2e-15 84.7 79 55.7
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 4.2e-15 84.7 79 55.7
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 4.2e-15 84.7 79 55.7
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 4.2e-15 84.7 79 55.7
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 4.2e-15 84.7 79 54.4
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 5.5e-15 84.3 80 55.0
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 5.5e-15 84.3 79 57.0
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 5.5e-15 84.3 79 55.7
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 5.5e-15 84.3 79 53.2
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 7.1e-15 84.0 79 55.7
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 7.1e-15 84.0 79 53.2
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 7.1e-15 84.0 79 54.4
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 7.1e-15 84.0 79 57.0
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 9.3e-15 83.6 79 54.4
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 9.3e-15 83.6 80 53.8
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 9.3e-15 83.6 79 54.4
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 9.3e-15 83.6 79 54.4
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 9.3e-15 83.6 79 55.7
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 9.3e-15 83.6 79 54.4
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 1.2e-14 83.2 79 54.4
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 1.2e-14 83.2 79 54.4
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.2e-14 83.2 79 55.7
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 1.2e-14 83.2 79 55.7
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 1.6e-14 82.8 79 55.7
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 1.6e-14 82.8 79 55.7
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 1.6e-14 82.8 79 54.4
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.6e-14 82.8 79 54.4
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.6e-14 82.8 79 54.4
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.6e-14 82.8 79 54.4
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 1.6e-14 82.8 79 53.2
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 2.1e-14 82.4 79 53.2
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 2.1e-14 82.4 79 55.7
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 2.1e-14 82.4 79 54.4
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 2.7e-14 82.0 79 54.4
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 2.7e-14 82.0 79 54.4
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 2.7e-14 82.0 79 55.7
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 2.7e-14 82.0 79 55.7
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 2.7e-14 82.0 79 53.2
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 2.7e-14 82.0 79 51.9
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 2.7e-14 82.0 79 54.4
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 3.5e-14 81.6 79 54.4
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 3.5e-14 81.6 79 54.4
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 3.5e-14 81.6 79 54.4
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 3.5e-14 81.6 79 53.2
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 3.5e-14 81.6 80 50.0
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 3.5e-14 81.6 79 54.4
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 4.6e-14 81.3 80 51.2
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 4.6e-14 81.3 72 56.9
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 4.6e-14 81.3 79 54.4
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 4.6e-14 81.3 79 55.7
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 4.6e-14 81.3 79 54.4
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 6.0e-14 80.9 79 53.2
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 6.0e-14 80.9 79 54.4
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 6.0e-14 80.9 79 54.4
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 7.9e-14 80.5 79 51.9
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 7.9e-14 80.5 79 53.2
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 7.9e-14 80.5 79 54.4
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 7.9e-14 80.5 79 51.9
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 7.9e-14 80.5 79 51.9
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.0e-13 80.1 79 54.4
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.0e-13 80.1 79 54.4
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.0e-13 80.1 79 54.4
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 1.3e-13 79.7 79 51.9
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 1.3e-13 79.7 79 51.9
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 1.3e-13 79.7 79 53.2
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.8e-13 79.3 79 51.9
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 3.9e-13 78.2 79 50.6
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 5.1e-13 77.8 79 53.2
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 8.7e-13 77.0 79 53.2
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 8.7e-13 77.0 77 53.2
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 1.1e-12 76.6 79 50.6
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 1.1e-12 76.6 79 50.6
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 1.1e-12 76.6 78 51.3
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 1.1e-12 76.6 72 52.8
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 1.9e-12 75.9 72 55.6
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 1.9e-12 75.9 79 50.6
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 2.5e-12 75.5 71 56.3
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 2.5e-12 75.5 79 51.9
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 3.3e-12 75.1 79 50.6
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 3.3e-12 75.1 71 54.9
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 3.3e-12 75.1 78 50.0
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 9.7e-12 73.6 79 53.2
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 1.6e-11 72.8 68 54.4
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 6.3e-11 70.9 79 46.8
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 2.4e-10 68.9 79 45.6
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 5.3e-10 67.8 85 44.7
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 6.9e-10 67.4 79 46.8
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 2.6e-09 65.5 108 37.0
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 1.2e-06 56.6 72 44.4
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 1.6e-06 56.2 64 50.0


User provided reference genes

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