Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041117.1 Olea europaea HOM05D004305 ORTHO05D005159 1.7e-244 849.0 446 100.0
Oeu015165.2 Olea europaea HOM05D004305 ORTHO05D005159 2.4e-118 429.9 477 58.9
Oeu060316.1 Olea europaea HOM05D004305 ORTHO05D005159 5.1e-76 289.3 482 45.0
MSTRG.16299 Avicennia marina HOM05D004305 ORTHO05D005159 1.5e-67 261.2 490 41.0
MSTRG.7546 Avicennia marina HOM05D004305 ORTHO05D005159 6.1e-61 239.2 489 40.3
Migut.M01906 Erythranthe guttata HOM05D004305 ORTHO05D005159 1.4e-52 211.5 491 38.9
Cc09_g07570 Coffea canephora HOM05D004305 ORTHO05D005159 5.4e-49 199.5 459 35.3
Oeu040075.1 Olea europaea HOM05D004305 ORTHO05D005159 5.9e-48 196.1 364 41.8
Lj1P1160T59 Lonicera japonica HOM05D004305 ORTHO05D005159 2.0e-43 181.0 492 35.2
Ciclev10015182m.g Citrus clementina HOM05D004305 ORTHO05D005159 2.2e-42 177.6 452 35.4
Peaxi162Scf00395g00054 Petunia axillaris HOM05D004305 ORTHO05D005159 3.9e-39 166.8 478 32.4
PGSC0003DMG400021011 Solanum tuberosum HOM05D004305 ORTHO05D005159 2.5e-38 164.1 478 34.9
Nitab4.5_0004204g0010 Nicotiana tabacum HOM05D004305 ORTHO05D005159 1.2e-37 161.8 467 33.0
Dinv06927 Davidia involucrata HOM05D004305 ORTHO05D005159 8.0e-37 159.1 372 38.2
Nitab4.5_0000076g0140 Nicotiana tabacum HOM05D004305 ORTHO05D005159 1.4e-36 158.3 474 33.3
SGA_v2.0_scaffold1G00275 Striga asiatica HOM05D004305 ORTHO05D005159 1.4e-36 158.3 451 34.6
CSS0026993 Camellia sinensis var. sinensis HOM05D004305 ORTHO05D005159 6.8e-36 156.0 497 33.6
Rhsim02G0163100 Rhododendron simsii HOM05D004305 ORTHO05D005159 1.1e-33 148.7 509 33.0
GSVIVG01021709001 Vitis vinifera HOM05D004305 ORTHO05D005159 1.6e-32 144.8 455 31.9
Solyc02g022920.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 1.7e-31 141.4 471 31.8
SGA_v2.0_scaffold223G42870 Striga asiatica HOM05D004305 ORTHO05D005159 3.9e-31 140.2 448 33.5
unitig_32.g10874 Utricularia gibba HOM05D004305 ORTHO05D005159 1.4e-28 131.7 439 31.7
unitig_748.g8282 Utricularia gibba HOM05D004305 ORTHO05D005159 4.0e-28 130.2 430 29.8
CANSAT35G0942 Cannabis sativa HOM05D004305 ORTHO05D005159 6.8e-28 129.4 471 32.7
Cpa.g.c43226 Carica papaya HOM05D004305 ORTHO05D005159 2.6e-27 127.5 451 33.5
Sabra11G0141400 Salix brachista HOM05D004305 ORTHO05D005159 6.4e-26 122.9 464 32.8
Atru.chr10.781 Acer truncatum HOM05D004305 ORTHO05D005159 1.4e-25 121.7 442 33.5
ClCG03G008260 Citrullus lanatus HOM05D004305 ORTHO05D005159 1.4e-25 121.7 465 30.8
HanXRQChr08g0237311 Helianthus annuus HOM05D004305 ORTHO05D005159 1.4e-25 121.7 480 31.5
unitig_748.g7348 Utricularia gibba HOM05D004305 ORTHO05D005159 4.1e-25 120.2 432 31.7
DCAR_003840 Daucus carota HOM05D004305 ORTHO05D005159 5.4e-25 119.8 433 29.3
FvH4_3g10700 Fragaria vesca HOM05D004305 ORTHO05D005159 5.4e-25 119.8 473 32.1
MELO3C002832.2 Cucumis melo HOM05D004305 ORTHO05D005159 7.1e-25 119.4 448 30.6
Thecc.06G003200 Theobroma cacao HOM05D004305 ORTHO05D005159 3.5e-24 117.1 445 31.0
CsaV3_1G037140 Cucumis sativus L. HOM05D004305 ORTHO05D005159 1.7e-23 114.8 456 29.8
Sopen02g006550 Solanum pennellii HOM05D004305 ORTHO05D005159 1.7e-23 114.8 435 30.8
Lsat_1_v5_gn_9_25860 Lactuca sativa HOM05D004305 ORTHO05D005159 5.1e-23 113.2 460 30.2
Manes.14G124700 Manihot esculenta HOM05D004305 ORTHO05D005159 1.1e-22 112.1 482 30.3
RcHm_v2.0_Chr5g0017411 Rosa chinensis HOM05D004305 ORTHO05D005159 1.1e-22 112.1 458 32.3
Solyc02g070040.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 1.5e-22 111.7 438 29.7
TWI15G0126 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 1.5e-22 111.7 454 32.2
Duzib235G0167 Durio zibethinus HOM05D004305 ORTHO05D005159 1.9e-22 111.3 440 32.0
Potri.001G464300 Populus trichocarpa HOM05D004305 ORTHO05D005159 3.3e-22 110.5 460 30.0
Carub.0007s2055 Capsella rubella HOM05D004305 ORTHO05D005159 5.6e-22 109.8 448 31.0
BcaB03g11678 Brassica carinata HOM05D004305 ORTHO05D005159 1.2e-21 108.6 444 31.8
MD05G1269300 Malus domestica HOM05D004305 ORTHO05D005159 1.2e-21 108.6 509 30.5
A03p52530 Brassica napus HOM05D004305 ORTHO05D005159 1.6e-21 108.2 441 29.5
Actinidia13459 Actinidia chinensis HOM05D004305 ORTHO05D005159 2.1e-21 107.8 406 30.5
BcaNung04140 Brassica carinata HOM05D004305 ORTHO05D005159 2.8e-21 107.5 454 30.6
AT4G20880 Arabidopsis thaliana HOM05D004305 ORTHO05D005159 3.6e-21 107.1 442 30.8
Eucgr.D00100 Eucalyptus grandis HOM05D004305 ORTHO05D005159 3.6e-21 107.1 478 30.3
FAN16G1832 Fragaria x ananassa HOM05D004305 ORTHO05D005159 4.7e-21 106.7 450 30.9
BraA03t14328Z Brassica rapa HOM05D004305 ORTHO05D005159 8.1e-21 105.9 432 30.3
Nitab4.5_0001583g0210 Nicotiana tabacum HOM05D004305 ORTHO05D005159 8.1e-21 105.9 191 38.7
FAN11G3528 Fragaria x ananassa HOM05D004305 ORTHO05D005159 1.4e-20 105.1 464 31.7
Sopen02g019200 Solanum pennellii HOM05D004305 ORTHO05D005159 1.4e-20 105.1 443 28.9
BolC7t45599H Brassica oleracea HOM05D004305 ORTHO05D005159 3.1e-20 104.0 446 31.2
Sabra16G0315300 Salix brachista HOM05D004305 ORTHO05D005159 5.2e-20 103.2 475 28.8
PGSC0003DMG400021114 Solanum tuberosum HOM05D004305 ORTHO05D005159 5.2e-20 103.2 444 28.6
BcaNung07356 Brassica carinata HOM05D004305 ORTHO05D005159 6.8e-20 102.8 441 28.8
Prupe.4G095400 Prunus persica HOM05D004305 ORTHO05D005159 6.8e-20 102.8 514 29.4
Sabra16G0313900 Salix brachista HOM05D004305 ORTHO05D005159 1.2e-19 102.1 477 28.5
Manes.06G058700 Manihot esculenta HOM05D004305 ORTHO05D005159 4.4e-19 100.1 484 28.1
MD10G1248100 Malus domestica HOM05D004305 ORTHO05D005159 5.8e-19 99.8 512 29.5
FAN25G2552 Fragaria x ananassa HOM05D004305 ORTHO05D005159 7.6e-19 99.4 469 29.9
Cfa000806 Carpinus fangiana HOM05D004305 ORTHO05D005159 2.2e-18 97.8 460 29.8
FAN21G2878 Fragaria x ananassa HOM05D004305 ORTHO05D005159 2.9e-18 97.4 429 31.5
Lj4g0027556 Lotus japonicus HOM05D004305 ORTHO05D005159 2.9e-18 97.4 469 30.9
A01p12300 Brassica napus HOM05D004305 ORTHO05D005159 3.7e-18 97.1 445 31.0
Medtr2g031350 Medicago truncatula HOM05D004305 ORTHO05D005159 1.9e-17 94.7 438 28.8
unitig_32.g11679 Utricularia gibba HOM05D004305 ORTHO05D005159 1.9e-17 94.7 146 43.2
BraA01t01174Z Brassica rapa HOM05D004305 ORTHO05D005159 3.2e-17 94.0 442 30.5
C07p50970 Brassica napus HOM05D004305 ORTHO05D005159 5.4e-17 93.2 444 30.2
Aa31LG6G2950 Aethionema arabicum HOM05D004305 ORTHO05D005159 7.1e-17 92.8 452 28.8
PSO675G0053 Papaver somniferum HOM05D004305 ORTHO05D005159 7.1e-17 92.8 483 26.7
ECA247G2099 Erigeron canadensis HOM05D004305 ORTHO05D005159 9.2e-17 92.4 442 28.3
THA.LOC104806249 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 1.2e-16 92.0 435 29.0
BcaNung05413 Brassica carinata HOM05D004305 ORTHO05D005159 2.1e-16 91.3 444 30.4
C01p14710 Brassica napus HOM05D004305 ORTHO05D005159 3.5e-16 90.5 444 30.0
BolC1t01423H Brassica oleracea HOM05D004305 ORTHO05D005159 3.5e-16 90.5 444 30.0
Duzib192G0088 Durio zibethinus HOM05D004305 ORTHO05D005159 6.0e-16 89.7 428 31.8
A08p14960 Brassica napus HOM05D004305 ORTHO05D005159 7.8e-16 89.4 429 27.7
BraA08t33477Z Brassica rapa HOM05D004305 ORTHO05D005159 7.8e-16 89.4 429 27.7
BolC3t20584H Brassica oleracea HOM05D004305 ORTHO05D005159 1.3e-15 88.6 438 29.5
Haze_05867 Corylus avellana HOM05D004305 ORTHO05D005159 1.7e-15 88.2 464 28.9
THA.LOC104812214 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 1.7e-15 88.2 451 29.3
CARHR227440 Cardamine hirsuta HOM05D004305 ORTHO05D005159 2.3e-15 87.8 457 29.3
Lalb_Chr07g0189031 Lupinus albus HOM05D004305 ORTHO05D005159 3.9e-15 87.0 467 27.0
Actinidia31373 Actinidia chinensis HOM05D004305 ORTHO05D005159 5.1e-15 86.7 380 29.5
Psat7g094000 Pisum sativum HOM05D004305 ORTHO05D005159 5.1e-15 86.7 440 26.1
Sp7g18970 Schrenkiella parvula HOM05D004305 ORTHO05D005159 5.1e-15 86.7 457 29.1
Sc03g0008520 Simmondsia chinensis HOM05D004305 ORTHO05D005159 6.6e-15 86.3 323 31.9
Psat1g165840 Pisum sativum HOM05D004305 ORTHO05D005159 8.6e-15 85.9 445 28.1
AL7G33270 Arabidopsis lyrata HOM05D004305 ORTHO05D005159 1.1e-14 85.5 454 29.7
COL.COLO4_26846 Corchorus olitorius HOM05D004305 ORTHO05D005159 1.1e-14 85.5 170 41.2
Nn1g03508 Nelumbo nucifera HOM05D004305 ORTHO05D005159 1.1e-14 85.5 479 26.5
Potri.011G162400 Populus trichocarpa HOM05D004305 ORTHO05D005159 2.5e-14 84.3 478 27.2
BcaC01g00679 Brassica carinata HOM05D004305 ORTHO05D005159 4.3e-14 83.6 443 29.8
BcaC09g51296 Brassica carinata HOM05D004305 ORTHO05D005159 4.3e-14 83.6 442 28.5
C03p83040 Brassica napus HOM05D004305 ORTHO05D005159 4.3e-14 83.6 443 29.8
Glyma.09G026200 Glycine max HOM05D004305 ORTHO05D005159 7.3e-14 82.8 446 27.6
Oeu058488.1 Olea europaea HOM05D004305 ORTHO05D005159 7.3e-14 82.8 170 43.5
Lalb_Chr18g0058121 Lupinus albus HOM05D004305 ORTHO05D005159 1.6e-13 81.6 459 27.9
Gohir.D06G124500 Gossypium hirsutum HOM05D004305 ORTHO05D005159 2.1e-13 81.3 427 28.6
QL93p0201_0023 Quercus lobata HOM05D004305 ORTHO05D005159 2.1e-13 81.3 465 29.5
QL05p063597 Quercus lobata HOM05D004305 ORTHO05D005159 4.7e-13 80.1 465 29.2
Sp2g09190 Schrenkiella parvula HOM05D004305 ORTHO05D005159 4.7e-13 80.1 434 27.4
Ca_00869_v3 Cicer arietinum L. HOM05D004305 ORTHO05D005159 6.2e-13 79.7 459 26.6
Glyma.15G132400 Glycine max HOM05D004305 ORTHO05D005159 6.2e-13 79.7 445 26.3
PGR083G0011 Punica granatum HOM05D004305 ORTHO05D005159 6.2e-13 79.7 194 39.7
Gorai.010G144500 Gossypium raimondii HOM05D004305 ORTHO05D005159 8.1e-13 79.3 427 28.1
CiPaw.09G142800 Carya illinoinensis HOM05D004305 ORTHO05D005159 2.4e-12 77.8 177 39.5
Lj6g0010125 Lotus japonicus HOM05D004305 ORTHO05D005159 4.0e-12 77.0 447 27.7
Gohir.A06G119900 Gossypium hirsutum HOM05D004305 ORTHO05D005159 5.2e-12 76.6 428 27.1
Thhalv10003311m.g Eutrema salsugineum HOM05D004305 ORTHO05D005159 1.5e-11 75.1 171 39.8
TWI38G0672 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 2.0e-11 74.7 444 28.4
ClCG01G025280 Citrullus lanatus HOM05D004305 ORTHO05D005159 2.6e-11 74.3 473 27.1
Nn1g07139 Nelumbo nucifera HOM05D004305 ORTHO05D005159 2.6e-11 74.3 169 39.1
BraA09t37708Z Brassica rapa HOM05D004305 ORTHO05D005159 4.4e-11 73.6 173 37.0
Sed0024509 Sechium edule HOM05D004305 ORTHO05D005159 5.8e-11 73.2 445 24.7
Thhalv10025304m.g Eutrema salsugineum HOM05D004305 ORTHO05D005159 9.9e-11 72.4 467 27.4
BcaB07g30530 Brassica carinata HOM05D004305 ORTHO05D005159 1.3e-10 72.0 174 36.2
A09p21070 Brassica napus HOM05D004305 ORTHO05D005159 1.7e-10 71.6 171 36.8
CsaV3_6G052500 Cucumis sativus L. HOM05D004305 ORTHO05D005159 1.7e-10 71.6 367 27.5
BraA06t27598Z Brassica rapa HOM05D004305 ORTHO05D005159 2.2e-10 71.2 287 30.0
MELO3C007060.2 Cucumis melo HOM05D004305 ORTHO05D005159 2.2e-10 71.2 459 27.2
BcaB07g30950 Brassica carinata HOM05D004305 ORTHO05D005159 6.4e-10 69.7 173 32.9
EL10Ac4g07786 Beta vulgaris HOM05D023924 ORTHO05D023401 8.4e-10 69.3 591 23.7
BcaC04g21838 Brassica carinata HOM05D004305 ORTHO05D005159 1.1e-09 68.9 172 32.6
C09p26810 Brassica napus HOM05D004305 ORTHO05D005159 1.1e-09 68.9 172 32.6
Medtr4g094532 Medicago truncatula HOM05D004305 ORTHO05D005159 1.1e-09 68.9 452 26.5
MBI02_g39880_MAGBIO Magnolia biondii HOM05D004305 ORTHO05D005159 1.4e-09 68.6 532 25.6
AUR62014849 Chenopodium quinoa HOM05D002349 ORTHO05D002464 1.9e-09 68.2 74 55.4
BolC7t43238H Brassica oleracea HOM05D004305 ORTHO05D005159 2.4e-09 67.8 176 35.8
C07p27080 Brassica napus HOM05D004305 ORTHO05D005159 4.2e-09 67.0 314 28.0
Carub.0008s0412 Capsella rubella HOM05D004305 ORTHO05D005159 4.2e-09 67.0 175 34.9
BcaC06g34566 Brassica carinata HOM05D004305 ORTHO05D005159 5.4e-09 66.6 314 28.0
Phvul.006G126000 Phaseolus vulgaris HOM05D004305 ORTHO05D005159 5.4e-09 66.6 434 26.5
VMungo0540G0062 Vigna mungo HOM05D004305 ORTHO05D005159 5.4e-09 66.6 455 25.9
BcaC03g16656 Brassica carinata HOM05D004305 ORTHO05D005159 9.3e-09 65.9 167 35.9
BolC9t55570H Brassica oleracea HOM05D004305 ORTHO05D005159 1.6e-08 65.1 173 32.9
CARHR178780 Cardamine hirsuta HOM05D004305 ORTHO05D005159 2.7e-08 64.3 437 25.2
SHI24805 Sapria himalayana HOM05D004305 ORTHO05D005159 3.5e-08 63.9 62 54.8
BcaC06g31624 Brassica carinata HOM05D004305 ORTHO05D005159 6.0e-08 63.2 176 33.0
CDE02G2479 Ceratophyllum demersum HOM05D006189 ORTHO05D007765 1.3e-07 62.0 172 29.7
Actinidia32347 Actinidia chinensis HOM05D004305 ORTHO05D005159 2.3e-07 61.2 494 25.5
TPR.G30380 Trifolium pratense HOM05D004305 ORTHO05D005159 3.0e-07 60.8 176 32.4
BolC2t10530H Brassica oleracea HOM05D004305 ORTHO05D005159 8.7e-07 59.3 148 37.2
Nn2g11492 Nelumbo nucifera HOM05D004305 ORTHO05D005159 8.7e-07 59.3 62 46.8
A06p47270 Brassica napus HOM05D004305 ORTHO05D005159 1.5e-06 58.5 279 29.0
Sed0021635 Sechium edule HOM05D004305 ORTHO05D005159 4.3e-06 57.0 171 31.0


User provided reference genes

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