Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 2.9e-48 194.9 97 100.0
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 1.1e-20 103.2 87 66.7
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 1.9e-20 102.4 87 65.5
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 2.5e-20 102.1 87 65.5
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 2.5e-20 102.1 87 64.4
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 2.5e-20 102.1 87 65.5
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 2.5e-20 102.1 87 64.4
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 3.3e-20 101.7 87 63.2
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 3.3e-20 101.7 87 64.4
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 3.3e-20 101.7 87 64.4
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 4.3e-20 101.3 87 63.2
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 4.3e-20 101.3 87 64.4
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 4.3e-20 101.3 87 63.2
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 5.6e-20 100.9 87 63.2
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 5.6e-20 100.9 87 63.2
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 7.4e-20 100.5 87 63.2
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 7.4e-20 100.5 87 64.4
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 7.4e-20 100.5 88 61.4
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 9.6e-20 100.1 87 63.2
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 9.6e-20 100.1 87 63.2
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 9.6e-20 100.1 87 63.2
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 9.6e-20 100.1 87 62.1
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 9.6e-20 100.1 87 60.9
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 9.6e-20 100.1 87 60.9
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 9.6e-20 100.1 87 62.1
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 9.6e-20 100.1 87 62.1
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 9.6e-20 100.1 87 64.4
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 9.6e-20 100.1 87 62.1
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 1.3e-19 99.8 87 60.9
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 1.3e-19 99.8 87 63.2
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 1.3e-19 99.8 87 60.9
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 1.6e-19 99.4 87 64.4
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 2.1e-19 99.0 87 62.1
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 2.1e-19 99.0 87 59.8
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 2.1e-19 99.0 87 62.1
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 2.8e-19 98.6 87 60.9
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 2.8e-19 98.6 87 62.1
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 3.7e-19 98.2 87 62.1
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 3.7e-19 98.2 87 62.1
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 3.7e-19 98.2 87 63.2
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 3.7e-19 98.2 87 63.2
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 3.7e-19 98.2 87 63.2
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 4.8e-19 97.8 87 60.9
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 4.8e-19 97.8 87 63.2
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 4.8e-19 97.8 87 60.9
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 6.2e-19 97.4 87 62.1
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 6.2e-19 97.4 88 60.2
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 6.2e-19 97.4 87 62.1
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 8.2e-19 97.1 87 64.4
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 8.2e-19 97.1 87 59.8
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 8.2e-19 97.1 87 63.2
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 8.2e-19 97.1 87 62.1
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 8.2e-19 97.1 87 63.2
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 1.4e-18 96.3 87 60.9
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 1.4e-18 96.3 97 54.6
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 1.8e-18 95.9 87 62.1
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.8e-18 95.9 87 62.1
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 1.8e-18 95.9 87 59.8
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 1.8e-18 95.9 87 60.9
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 2.4e-18 95.5 87 60.9
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 2.4e-18 95.5 87 62.1
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 2.4e-18 95.5 87 59.8
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 3.1e-18 95.1 87 59.8
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 4.0e-18 94.7 87 60.9
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 4.0e-18 94.7 87 59.8
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 5.3e-18 94.4 87 60.9
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 6.9e-18 94.0 87 58.6
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 6.9e-18 94.0 87 58.6
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 6.9e-18 94.0 87 58.6
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 6.9e-18 94.0 89 58.4
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 9.0e-18 93.6 87 57.5
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 9.0e-18 93.6 87 58.6
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 1.2e-17 93.2 87 58.6
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 1.2e-17 93.2 87 58.6
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 2.0e-17 92.4 86 60.5
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 2.0e-17 92.4 87 57.5
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 2.0e-17 92.4 87 62.1
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 2.6e-17 92.0 87 57.5
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 2.6e-17 92.0 87 57.5
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 4.5e-17 91.3 87 59.8
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 7.6e-17 90.5 92 53.3
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.0e-16 90.1 86 59.3
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 1.0e-16 90.1 87 58.6
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 1.0e-16 90.1 87 55.2
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 1.3e-16 89.7 88 54.5
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 2.2e-16 89.0 84 57.1
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 4.9e-16 87.8 88 55.7
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 4.9e-16 87.8 90 55.6
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 1.9e-15 85.9 88 53.4
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 3.2e-15 85.1 100 49.0
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 3.2e-15 85.1 84 57.1
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 4.2e-15 84.7 83 56.6
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 5.5e-15 84.3 84 54.8
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 5.5e-15 84.3 84 54.8
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 5.5e-15 84.3 86 53.5
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 5.5e-15 84.3 87 51.7
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 7.1e-15 84.0 84 56.0
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 7.1e-15 84.0 87 52.9
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.6e-14 82.8 88 54.5
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 1.6e-14 82.8 84 53.6
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 1.6e-14 82.8 84 53.6
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 1.6e-14 82.8 84 53.6
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 1.6e-14 82.8 84 53.6
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 2.7e-14 82.0 87 54.0
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 7.9e-14 80.5 88 52.3
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 2.3e-13 79.0 87 51.7
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 3.0e-13 78.6 87 50.6
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 3.0e-13 78.6 87 50.6
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 3.9e-13 78.2 87 49.4
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 6.7e-13 77.4 87 49.4
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.5e-12 76.3 87 48.3
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 2.5e-12 75.5 87 50.6
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 2.2e-11 72.4 87 48.3
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 1.6e-06 56.2 46 63.0


User provided reference genes

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