Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 1.2e-175 619.8 326 100.0
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 9.1e-131 470.7 323 77.1
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 4.5e-130 468.4 320 75.9
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 1.1e-128 463.8 322 76.4
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 4.2e-128 461.8 323 76.5
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 1.6e-127 459.9 326 75.5
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 2.1e-127 459.5 321 75.1
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 2.3e-126 456.1 322 74.5
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 3.0e-126 455.7 321 73.2
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 5.2e-126 454.9 322 74.8
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 2.6e-125 452.6 322 74.5
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 2.4e-123 446.0 321 72.6
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 5.9e-122 441.4 322 73.0
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 7.7e-122 441.0 321 72.9
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 1.0e-121 440.7 323 73.4
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 1.9e-120 436.4 293 78.5
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 2.8e-119 432.6 322 71.7
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 6.1e-119 431.4 344 68.9
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 6.1e-119 431.4 322 72.0
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 3.0e-118 429.1 322 71.7
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 8.8e-118 427.6 322 72.4
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 8.8e-118 427.6 322 71.1
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 1.5e-117 426.8 322 70.5
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 4.4e-117 425.2 327 70.9
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 4.4e-117 425.2 326 71.8
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 1.8e-115 419.9 333 68.8
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 1.8e-115 419.9 322 70.8
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 3.1e-115 419.1 327 70.3
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 4.1e-115 418.7 323 70.0
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 7.0e-115 417.9 324 68.5
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 9.2e-115 417.5 327 70.0
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 1.6e-114 416.8 329 68.1
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 1.6e-114 416.8 323 71.2
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 2.7e-114 416.0 324 70.1
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 7.8e-114 414.5 327 69.7
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 1.0e-113 414.1 330 69.7
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.7e-113 413.3 323 70.6
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 3.8e-113 412.1 323 69.3
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 6.6e-113 411.4 323 70.3
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 2.5e-112 409.5 325 68.6
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 7.3e-112 407.9 321 70.1
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 9.5e-112 407.5 325 67.7
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 8.0e-111 404.4 322 68.0
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 1.0e-110 404.1 324 68.5
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 1.0e-110 404.1 327 67.3
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.8e-110 403.3 324 67.9
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 2.3e-110 402.9 315 69.8
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 6.8e-110 401.4 333 67.0
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 6.8e-110 401.4 324 67.0
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 2.0e-109 399.8 249 83.5
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 3.4e-109 399.1 321 68.2
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 1.8e-107 393.3 322 66.5
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 3.2e-107 392.5 320 65.9
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 2.7e-106 389.4 305 69.2
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 6.0e-106 388.3 323 65.0
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 6.0e-106 388.3 330 66.1
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 7.8e-106 387.9 252 79.0
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 3.9e-105 385.6 357 61.1
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 3.9e-105 385.6 332 63.9
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 5.0e-105 385.2 333 64.6
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 1.1e-104 384.0 332 64.2
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 1.5e-104 383.6 322 64.9
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 4.3e-104 382.1 292 68.8
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 7.3e-104 381.3 332 63.9
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 1.2e-103 380.6 333 64.3
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 2.1e-103 379.8 292 69.2
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 3.6e-103 379.0 323 65.0
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 4.7e-103 378.6 346 62.1
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 6.2e-103 378.3 284 70.8
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 8.0e-103 377.9 325 64.3
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 1.1e-102 377.5 260 75.0
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 2.3e-102 376.3 322 64.9
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 2.3e-102 376.3 321 62.6
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 3.1e-102 375.9 320 65.0
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 1.2e-101 374.0 250 76.8
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 2.0e-101 373.2 259 73.7
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 2.6e-101 372.9 236 81.4
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 2.6e-101 372.9 268 69.4
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 3.4e-101 372.5 259 74.5
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 3.4e-101 372.5 236 81.4
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 5.8e-101 371.7 298 66.4
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 9.8e-101 370.9 292 67.8
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 1.3e-100 370.5 371 59.3
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 1.2e-98 364.0 321 63.2
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 1.6e-98 363.6 322 64.6
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 3.9e-97 359.0 290 67.2
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 1.1e-96 357.5 284 67.6
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 1.6e-95 353.6 333 61.0
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 5.2e-94 348.6 327 61.2
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 8.9e-94 347.8 221 79.2
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.2e-90 337.4 333 58.9
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.1e-90 336.7 250 70.0
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.2e-87 327.4 249 68.7
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 8.9e-86 321.2 220 78.2
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 1.5e-85 320.5 254 68.9
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 8.7e-81 304.7 216 69.0
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 2.4e-75 286.6 225 69.8
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 3.0e-73 279.6 254 59.4
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 1.9e-72 276.9 333 48.0
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 1.1e-70 271.2 277 51.6
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 5.3e-70 268.9 244 60.7
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 3.4e-69 266.2 253 54.2
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 9.9e-69 264.6 259 58.7
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.6e-61 240.0 249 52.6
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 3.4e-61 239.6 263 48.3
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 9.9e-61 238.0 253 50.6
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 5.5e-59 232.3 253 49.4
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 7.1e-59 231.9 251 48.6
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 1.1e-51 208.0 250 44.8
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 7.4e-48 195.3 321 45.8
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 6.9e-46 188.7 129 73.6
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 7.6e-45 185.3 168 66.7
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 5.0e-44 182.6 246 42.7
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 1.9e-40 170.6 123 69.1
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 1.5e-37 161.0 246 37.4
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 4.8e-23 112.8 244 30.3
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 2.9e-20 103.6 235 31.9
PGSC0003DMG401002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 3.1e-14 83.6 83 60.2
Actinidia30278 Actinidia chinensis HOM05D005233 ORTHO05D006308 1.5e-08 64.7 67 58.2
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 1.3e-07 61.6 32 96.9
Atru.chr6.459 Acer truncatum HOM05D006532 ORTHO05D008570 3.7e-07 60.1 143 36.4
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 9.1e-06 55.5 52 51.9


User provided reference genes

Program Settings