Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038698.1 Olea europaea HOM05D005809 ORTHO05D007259 6.8e-63 243.8 122 100.0
Oeu007777.1 Olea europaea HOM05D005809 ORTHO05D007259 2.0e-59 232.3 122 94.3
Oeu049715.1 Olea europaea HOM05D005809 ORTHO05D007259 5.9e-59 230.7 122 92.6
Oeu017561.1 Olea europaea HOM05D005809 ORTHO05D007259 2.9e-58 228.4 122 92.6
Oeu029241.1 Olea europaea HOM05D005809 ORTHO05D007259 6.6e-50 200.7 108 90.7
Oeu052197.1 Olea europaea HOM05D005809 ORTHO05D007259 1.7e-29 132.9 91 71.4
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 1.3e-21 106.7 90 57.8
Lalb_Chr23g0275681 Lupinus albus HOM05D005809 ORTHO05D007259 1.3e-21 106.7 91 58.2
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 6.4e-21 104.4 90 56.7
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 6.4e-21 104.4 90 60.0
Thecc.09G030800 Theobroma cacao HOM05D005809 ORTHO05D007259 1.4e-20 103.2 83 57.8
Atru.chr7.51 Acer truncatum HOM05D005809 ORTHO05D007259 1.9e-20 102.8 117 47.9
Glyma.06G219400 Glycine max HOM05D005809 ORTHO05D007259 1.9e-20 102.8 91 58.2
Peaxi162Scf00401g00082 Petunia axillaris HOM05D005809 ORTHO05D007259 3.2e-20 102.1 95 54.7
Phvul.009G195100 Phaseolus vulgaris HOM05D005809 ORTHO05D007259 3.2e-20 102.1 91 57.1
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 4.2e-20 101.7 83 56.6
Glyma.06G219200 Glycine max HOM05D005809 ORTHO05D007259 5.4e-20 101.3 107 53.3
Gorai.009G057000 Gossypium raimondii HOM05D005809 ORTHO05D007259 9.3e-20 100.5 83 56.6
Gohir.A05G055000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 1.2e-19 100.1 83 56.6
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 1.2e-19 100.1 83 56.6
Ca_03733_v3 Cicer arietinum L. HOM05D005809 ORTHO05D007259 1.6e-19 99.8 91 56.0
COL.COLO4_18808 Corchorus olitorius HOM05D005809 ORTHO05D007259 1.6e-19 99.8 83 57.8
Nitab4.5_0005653g0040 Nicotiana tabacum HOM05D005809 ORTHO05D007259 1.6e-19 99.8 91 54.9
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 2.1e-19 99.4 89 56.2
Cc06_g14990 Coffea canephora HOM05D005809 ORTHO05D007259 4.6e-19 98.2 91 54.9
Medtr2g460780 Medicago truncatula HOM05D005809 ORTHO05D007259 4.6e-19 98.2 91 54.9
Psat1g021800 Pisum sativum HOM05D005809 ORTHO05D007259 4.6e-19 98.2 89 55.1
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 6.0e-19 97.8 89 55.1
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 7.9e-19 97.4 89 51.7
Nitab4.5_0001571g0010 Nicotiana tabacum HOM05D005809 ORTHO05D007259 7.9e-19 97.4 91 54.9
Prupe.7G262800 Prunus persica HOM05D005809 ORTHO05D007259 7.9e-19 97.4 91 51.6
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 1.0e-18 97.1 91 54.9
ECA247G0266 Erigeron canadensis HOM05D005809 ORTHO05D007259 1.0e-18 97.1 82 56.1
GSVIVG01023603001 Vitis vinifera HOM05D005809 ORTHO05D007259 1.0e-18 97.1 89 53.9
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 1.3e-18 96.7 91 53.8
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.7e-18 96.3 89 50.6
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea HOM05D005809 ORTHO05D007259 2.3e-18 95.9 99 49.5
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 2.3e-18 95.9 91 52.7
CARHR271730 Cardamine hirsuta HOM05D005809 ORTHO05D007259 2.3e-18 95.9 89 55.1
Duzib168G0271 Durio zibethinus HOM05D005809 ORTHO05D007259 2.3e-18 95.9 83 57.8
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 2.3e-18 95.9 91 53.8
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea HOM05D005809 ORTHO05D007259 3.0e-18 95.5 93 51.6
CANSAT11G2656 Cannabis sativa HOM05D005809 ORTHO05D007259 3.0e-18 95.5 91 53.8
HanXRQChr17g0552351 Helianthus annuus HOM05D005809 ORTHO05D007259 3.0e-18 95.5 91 54.9
TPR.G20735 Trifolium pratense HOM05D005809 ORTHO05D007259 5.1e-18 94.7 91 53.8
Carub.0008s1848 Capsella rubella HOM05D005809 ORTHO05D007259 6.6e-18 94.4 89 53.9
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 6.6e-18 94.4 80 60.0
Manes.06G033951 Manihot esculenta HOM05D005809 ORTHO05D007259 6.6e-18 94.4 93 54.8
PGSC0003DMG401011139 Solanum tuberosum HOM05D005809 ORTHO05D007259 6.6e-18 94.4 91 51.6
THA.LOC104817821 Tarenaya hassleriana HOM05D005809 ORTHO05D007259 6.6e-18 94.4 83 54.2
Ciclev10009378m.g Citrus clementina HOM05D005809 ORTHO05D007259 8.7e-18 94.0 91 49.5
DCAR_017909 Daucus carota HOM05D005809 ORTHO05D007259 8.7e-18 94.0 117 47.0
MD02G1007700 Malus domestica HOM05D005809 ORTHO05D007259 8.7e-18 94.0 91 52.7
Solyc07g005640.3 Solanum lycopersicum HOM05D005809 ORTHO05D007259 8.7e-18 94.0 91 51.6
Cpa.g.sc46.154 Carica papaya HOM05D005809 ORTHO05D007259 1.1e-17 93.6 91 54.9
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 1.5e-17 93.2 89 52.8
Sed0001225 Sechium edule HOM05D005809 ORTHO05D007259 1.5e-17 93.2 89 51.7
TAR636G3217 Trochodendron aralioides HOM05D005809 ORTHO05D007259 1.5e-17 93.2 91 52.7
Dinv42856 Davidia involucrata HOM05D005809 ORTHO05D007259 1.9e-17 92.8 89 51.7
Dinv43244 Davidia involucrata HOM05D005809 ORTHO05D007259 1.9e-17 92.8 89 51.7
RcHm_v2.0_Chr2g0085671 Rosa chinensis HOM05D005809 ORTHO05D007259 1.9e-17 92.8 91 53.8
Aqoxy2G02328 Aquilegia oxysepala HOM05D005809 ORTHO05D007259 2.5e-17 92.4 89 53.9
AL8G34030 Arabidopsis lyrata HOM05D005809 ORTHO05D007259 2.5e-17 92.4 89 52.8
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 2.5e-17 92.4 84 54.8
Sp6g19620 Schrenkiella parvula HOM05D005809 ORTHO05D007259 2.5e-17 92.4 89 52.8
Sopen07g001740 Solanum pennellii HOM05D005809 ORTHO05D007259 2.5e-17 92.4 91 49.5
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 2.5e-17 92.4 96 49.0
FAN23G2666 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.3e-17 92.0 91 53.8
PGR102G1797 Punica granatum HOM05D005809 ORTHO05D007259 3.3e-17 92.0 91 51.6
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 3.3e-17 92.0 89 53.9
Ah.02g128190 Amaranthus hybridus HOM05D005809 ORTHO05D007259 4.3e-17 91.7 90 53.3
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 5.6e-17 91.3 90 51.1
CsaV3_2G007490 Cucumis sativus L. HOM05D005809 ORTHO05D007259 5.6e-17 91.3 89 50.6
vmacro05441 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 5.6e-17 91.3 110 44.5
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 7.3e-17 90.9 87 52.9
BraA10t43609Z Brassica rapa HOM05D005809 ORTHO05D007259 7.3e-17 90.9 91 52.7
MELO3C004136.2 Cucumis melo HOM05D005809 ORTHO05D007259 7.3e-17 90.9 89 49.4
FvH4_1g00940 Fragaria vesca HOM05D005809 ORTHO05D007259 7.3e-17 90.9 96 50.0
TWI32G0918 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 7.3e-17 90.9 97 51.5
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 1.3e-16 90.1 91 51.6
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 1.6e-16 89.7 91 52.7
Hund01517 Selenicereus undatus HOM05D005809 ORTHO05D007259 1.6e-16 89.7 80 53.8
HPP92_016035 Vanilla planifolia HOM05D005809 ORTHO05D007259 1.6e-16 89.7 80 55.0
A10p16200 Brassica napus HOM05D005809 ORTHO05D007259 2.1e-16 89.4 83 53.0
C09p49790 Brassica napus HOM05D005809 ORTHO05D007259 2.1e-16 89.4 83 53.0
BolC9t57830H Brassica oleracea HOM05D005809 ORTHO05D007259 2.1e-16 89.4 83 53.0
FAN28G0834 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.1e-16 89.4 96 50.0
HPP92_016019 Vanilla planifolia HOM05D005809 ORTHO05D007259 2.1e-16 89.4 80 53.8
Thhalv10014592m.g Eutrema salsugineum HOM05D005809 ORTHO05D007259 2.8e-16 89.0 91 50.5
Lj9C717G7 Lonicera japonica HOM05D005809 ORTHO05D007259 2.8e-16 89.0 89 50.6
Nn8g39891 Nelumbo nucifera HOM05D005809 ORTHO05D007259 2.8e-16 89.0 82 50.0
AT5G57950 Arabidopsis thaliana HOM05D005809 ORTHO05D007259 3.6e-16 88.6 89 51.7
ATR0739G206 Amborella trichopoda HOM05D005809 ORTHO05D007259 1.1e-15 87.0 80 53.8
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 1.4e-15 86.7 91 51.6
Aa31LG1G19310 Aethionema arabicum HOM05D005809 ORTHO05D007259 1.8e-15 86.3 104 44.2
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 2.4e-15 85.9 104 41.3
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 2.4e-15 85.9 91 50.5
EL10As1g23143 Beta vulgaris HOM05D005809 ORTHO05D007259 3.1e-15 85.5 81 49.4
PSO782G1751 Papaver somniferum HOM05D005809 ORTHO05D007259 4.0e-15 85.1 83 49.4
PSO063G2086 Papaver somniferum HOM05D005809 ORTHO05D007259 5.3e-15 84.7 83 49.4
CDE12G0564 Ceratophyllum demersum HOM05D005809 ORTHO05D007259 6.9e-15 84.3 80 48.8
AUR62035200 Chenopodium quinoa HOM05D005809 ORTHO05D007259 6.9e-15 84.3 83 51.8
Zm00001eb312980 Zea mays HOM05D005809 ORTHO05D007259 6.9e-15 84.3 80 50.0
Sc08g0005640 Simmondsia chinensis HOM05D005809 ORTHO05D007259 1.2e-14 83.6 85 49.4
SEGI_31268 Sequoiadendron giganteum HOM05D005809 ORTHO05D007259 1.5e-14 83.2 80 50.0
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 7.6e-14 80.9 91 46.2
Os09g0420600 Oryza sativa ssp. japonica HOM05D005809 ORTHO05D007259 1.3e-13 80.1 80 46.2
RcHm_v2.0_Chr5g0031291 Rosa chinensis HOM05D005809 ORTHO05D007259 2.9e-13 79.0 91 48.4
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis HOM05D005809 ORTHO05D007259 4.9e-13 78.2 81 42.0
ClCG02G014530 Citrullus lanatus HOM05D005809 ORTHO05D007259 4.2e-12 75.1 110 40.9
FAN25G0559 Fragaria x ananassa HOM05D005809 ORTHO05D007259 4.2e-12 75.1 79 43.0
Pp3c16_13530 Physcomitrium patens HOM05D005809 ORTHO05D007259 1.2e-11 73.6 83 41.0
Pp3c8_2960 Physcomitrium patens HOM05D005809 ORTHO05D007259 1.2e-11 73.6 83 39.8
Mapoly0003s0072 Marchantia polymorpha HOM05D005809 ORTHO05D007259 2.7e-11 72.4 80 43.8
SMO361G0248 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 2.8e-08 62.4 81 37.0
SMO361G0343 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 2.8e-08 62.4 81 37.0
FAN21G3780 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.7e-08 62.0 60 53.3
FAN26G2229 Fragaria x ananassa HOM05D005809 ORTHO05D007259 4.8e-08 61.6 57 54.4
SHI02853 Sapria himalayana HOM05D005809 ORTHO05D007259 4.8e-08 61.6 75 44.0
CBR_g38078 Chara braunii HOM05D000019 ORTHO05D000048 6.9e-07 57.8 74 29.7
FvH4_3g18530 Fragaria vesca HOM05D005809 ORTHO05D007259 6.9e-07 57.8 57 52.6
FAN11G2737 Fragaria x ananassa HOM05D005809 ORTHO05D007259 6.9e-07 57.8 57 52.6


User provided reference genes

Program Settings