Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038584.1 Olea europaea HOM05D002045 ORTHO05D002014 3.0e-182 641.7 326 100.0
Oeu061089.2 Olea europaea HOM05D002045 ORTHO05D002014 2.1e-87 326.6 447 46.1
Migut.E01238 Erythranthe guttata HOM05D002045 ORTHO05D002014 9.4e-35 151.8 468 29.3
Dinv38855 Davidia involucrata HOM05D002045 ORTHO05D002014 6.1e-34 149.1 502 27.7
MSTRG.13878 Avicennia marina HOM05D002045 ORTHO05D002014 1.8e-33 147.5 492 28.5
GSVIVG01019501001 Vitis vinifera HOM05D002045 ORTHO05D002014 4.4e-32 142.9 330 33.6
Cc08_g15800 Coffea canephora HOM05D002045 ORTHO05D002014 1.3e-31 141.4 473 28.3
Actinidia22722 Actinidia chinensis HOM05D002045 ORTHO05D002014 1.0e-28 131.7 501 25.9
CSS0017749 Camellia sinensis var. sinensis HOM05D002045 ORTHO05D002014 1.3e-28 131.3 473 27.1
CSS0046700 Camellia sinensis var. sinensis HOM05D002045 ORTHO05D002014 2.9e-28 130.2 476 26.7
Rhsim07G0083700 Rhododendron simsii HOM05D002045 ORTHO05D002014 5.0e-28 129.4 488 27.3
SalBow1G3290 Salvia bowleyana HOM05D002045 ORTHO05D002014 4.2e-27 126.3 464 29.7
vmacro11443 Vaccinium macrocarpon HOM05D002045 ORTHO05D002014 1.2e-26 124.8 480 26.5
vmacro13910 Vaccinium macrocarpon HOM05D002045 ORTHO05D002014 1.0e-25 121.7 495 25.3
Atru.chr9.2039 Acer truncatum HOM05D002045 ORTHO05D002014 1.3e-23 114.8 475 25.1
Atru.chr2.761 Acer truncatum HOM05D002045 ORTHO05D002014 1.7e-23 114.4 475 25.1
QL02p031368 Quercus lobata HOM05D002045 ORTHO05D002014 1.2e-21 108.2 383 26.4
Rhsim02G0241200 Rhododendron simsii HOM05D002045 ORTHO05D002014 2.0e-21 107.5 486 24.3
SGA_v2.0_scaffold144G35851 Striga asiatica HOM05D002045 ORTHO05D002014 5.9e-21 105.9 378 28.3
SGA_v2.0_scaffold111G31427 Striga asiatica HOM05D002045 ORTHO05D002014 7.7e-21 105.5 440 27.7
Haze_08656 Corylus avellana HOM05D002045 ORTHO05D002014 5.5e-19 99.4 484 24.2
Dinv37548 Davidia involucrata HOM05D002045 ORTHO05D002014 9.4e-19 98.6 148 43.9
HanXRQChr17g0535131 Helianthus annuus HOM05D002045 ORTHO05D002014 6.1e-18 95.9 346 26.3
Nn1g01817 Nelumbo nucifera HOM05D002045 ORTHO05D002014 4.0e-17 93.2 502 23.3
TAR374G0195 Trochodendron aralioides HOM05D002045 ORTHO05D002014 5.2e-17 92.8 176 36.4
Potri.014G095700 Populus trichocarpa HOM05D002045 ORTHO05D002014 1.2e-16 91.7 408 22.5
TAR629G3516 Trochodendron aralioides HOM05D002045 ORTHO05D002014 1.5e-16 91.3 490 23.7
Prupe.5G115600 Prunus persica HOM05D002045 ORTHO05D002014 2.6e-16 90.5 117 45.3
CiPaw.12G084800 Carya illinoinensis HOM05D002045 ORTHO05D002014 4.4e-16 89.7 440 23.4
Sed0007013 Sechium edule HOM05D002045 ORTHO05D002014 5.7e-16 89.4 480 24.0
HanXRQChr03g0088291 Helianthus annuus HOM05D002045 ORTHO05D002014 7.5e-16 89.0 290 25.9
unitig_32.g10690 Utricularia gibba HOM05D002045 ORTHO05D002014 7.5e-16 89.0 460 24.3
Lsat_1_v5_gn_3_10180 Lactuca sativa HOM05D002045 ORTHO05D002014 3.7e-15 86.7 316 27.2
ECA246G3070 Erigeron canadensis HOM05D002045 ORTHO05D002014 1.1e-14 85.1 338 26.3
Actinidia04209 Actinidia chinensis HOM05D002045 ORTHO05D002014 2.4e-14 84.0 438 24.9
CSS0030482 Camellia sinensis var. sinensis HOM05D002045 ORTHO05D002014 4.1e-14 83.2 401 23.9
Atru.chr5.629 Acer truncatum HOM05D002045 ORTHO05D002014 5.3e-14 82.8 419 23.2
Dinv37547 Davidia involucrata HOM05D002045 ORTHO05D002014 1.2e-13 81.6 136 38.2
Manes.05G025300 Manihot esculenta HOM05D002045 ORTHO05D002014 1.2e-13 81.6 160 34.4
Cfa003827 Carpinus fangiana HOM05D002045 ORTHO05D002014 1.6e-13 81.3 459 23.5
Lalb_Chr17g0342431 Lupinus albus HOM05D002045 ORTHO05D002014 2.0e-13 80.9 130 36.2
Manes.01G248100 Manihot esculenta HOM05D002045 ORTHO05D002014 2.0e-13 80.9 112 39.3
Lj2A171T60 Lonicera japonica HOM05D002045 ORTHO05D002014 3.5e-13 80.1 126 39.7
Aqoxy7G00147 Aquilegia oxysepala HOM05D002045 ORTHO05D002014 4.5e-13 79.7 176 36.4
Nitab4.5_0000223g0240 Nicotiana tabacum HOM05D002045 ORTHO05D002014 4.5e-13 79.7 173 32.9
Haze_15628 Corylus avellana HOM05D002045 ORTHO05D002014 5.9e-13 79.3 459 22.2
MD14G1121700 Malus domestica HOM05D002045 ORTHO05D002014 1.0e-12 78.6 406 24.9
Sabra14G0070200 Salix brachista HOM05D002045 ORTHO05D002014 1.3e-12 78.2 151 31.8
Gorai.001G156300 Gossypium raimondii HOM05D002045 ORTHO05D002014 1.7e-12 77.8 135 33.3
Dinv32561 Davidia involucrata HOM05D002045 ORTHO05D002014 2.9e-12 77.0 192 30.7
unitig_88.g27732 Utricularia gibba HOM05D002045 ORTHO05D002014 2.9e-12 77.0 154 35.1
Gohir.D07G144300 Gossypium hirsutum HOM05D002045 ORTHO05D002014 3.8e-12 76.6 135 34.1
Sabra03G0099100 Salix brachista HOM05D002045 ORTHO05D002014 3.8e-12 76.6 181 30.9
Lj3g0007856 Lotus japonicus HOM05D002045 ORTHO05D002014 5.0e-12 76.3 135 37.0
Sabra01G0069800 Salix brachista HOM05D002045 ORTHO05D002014 6.5e-12 75.9 179 32.4
Nitab4.5_0010205g0010 Nicotiana tabacum HOM05D002045 ORTHO05D002014 8.5e-12 75.5 180 31.1
Potri.003G137700 Populus trichocarpa HOM05D002045 ORTHO05D002014 8.5e-12 75.5 180 31.7
FvH4_5g04100 Fragaria vesca HOM05D002045 ORTHO05D002014 1.1e-11 75.1 117 39.3
FAN13G2437 Fragaria x ananassa HOM05D002045 ORTHO05D002014 1.1e-11 75.1 117 39.3
FAN18G3838 Fragaria x ananassa HOM05D002045 ORTHO05D002014 1.1e-11 75.1 117 39.3
Solyc08g082040.4 Solanum lycopersicum HOM05D002045 ORTHO05D002014 1.9e-11 74.3 174 32.2
Gohir.A02G102102 Gossypium hirsutum HOM05D002045 ORTHO05D002014 2.5e-11 73.9 77 45.5
Lj7A503T50 Lonicera japonica HOM05D002045 ORTHO05D002014 2.5e-11 73.9 173 30.1
RcHm_v2.0_Chr7g0195401 Rosa chinensis HOM05D002045 ORTHO05D002014 2.5e-11 73.9 158 35.4
Peaxi162Scf00074g01133 Petunia axillaris HOM05D002045 ORTHO05D002014 3.2e-11 73.6 113 37.2
FAN18G4174 Fragaria x ananassa HOM05D002045 ORTHO05D002014 4.2e-11 73.2 117 39.3
Manes.02G012300 Manihot esculenta HOM05D002045 ORTHO05D002014 4.2e-11 73.2 147 35.4
Gohir.D03G082000 Gossypium hirsutum HOM05D002045 ORTHO05D002014 5.5e-11 72.8 77 44.2
Gorai.003G081600 Gossypium raimondii HOM05D002045 ORTHO05D002014 5.5e-11 72.8 77 44.2
PSO384G3902 Papaver somniferum HOM05D002045 ORTHO05D002014 7.2e-11 72.4 201 29.4
CAN.G532.98 Capsicum annuum HOM05D002045 ORTHO05D002014 9.4e-11 72.0 166 31.3
Sopen08g030330 Solanum pennellii HOM05D002045 ORTHO05D002014 9.4e-11 72.0 174 29.3
CSS0034118 Camellia sinensis var. sinensis HOM05D002045 ORTHO05D002014 1.2e-10 71.6 370 23.5
DCAR_027718 Daucus carota HOM05D002045 ORTHO05D002014 1.6e-10 71.2 128 37.5
PSO135G1064 Papaver somniferum HOM05D002045 ORTHO05D002014 1.6e-10 71.2 201 29.4
Potri.001G093900 Populus trichocarpa HOM05D002045 ORTHO05D002014 1.6e-10 71.2 177 33.3
PGSC0003DMG400012301 Solanum tuberosum HOM05D002045 ORTHO05D002014 1.6e-10 71.2 174 29.3
MSTRG.17325 Avicennia marina HOM05D002045 ORTHO05D002014 2.1e-10 70.9 108 33.3
CiPaw.02G039200 Carya illinoinensis HOM05D002045 ORTHO05D002014 4.7e-10 69.7 408 23.0
Lj9A591T85 Lonicera japonica HOM05D002045 ORTHO05D002014 6.1e-10 69.3 436 22.5
MBI07_g24336_MAGBIO Magnolia biondii HOM05D002045 ORTHO05D002014 6.1e-10 69.3 186 27.4
Cpa.g.c29045.1 Carica papaya HOM05D002045 ORTHO05D002014 1.0e-09 68.6 172 29.7
FAN08G1238 Fragaria x ananassa HOM05D002045 ORTHO05D002014 1.0e-09 68.6 117 39.3
MBI06_g32756_MAGBIO Magnolia biondii HOM05D002045 ORTHO05D002014 1.0e-09 68.6 83 33.7
CANSAT21G1669 Cannabis sativa HOM05D002045 ORTHO05D002014 1.4e-09 68.2 350 24.3
TWI60G0276 Tripterygium wilfordii HOM05D002045 ORTHO05D002014 1.8e-09 67.8 145 33.1
ECA234G2013 Erigeron canadensis HOM05D002045 ORTHO05D002014 2.3e-09 67.4 224 25.9
Oeu007859.2 Olea europaea HOM05D002045 ORTHO05D002014 2.3e-09 67.4 222 27.0
Gohir.A07G139200 Gossypium hirsutum HOM05D002045 ORTHO05D002014 3.0e-09 67.0 137 34.3
Prupe.2G184400 Prunus persica HOM05D002045 ORTHO05D002014 3.0e-09 67.0 229 29.3
Actinidia28495 Actinidia chinensis HOM05D002045 ORTHO05D002014 4.0e-09 66.6 137 35.0
Actinidia27013 Actinidia chinensis HOM05D002045 ORTHO05D002014 5.2e-09 66.2 74 47.3
ClCG05G000970 Citrullus lanatus HOM05D002045 ORTHO05D002014 5.2e-09 66.2 157 32.5
Gorai.008G123900 Gossypium raimondii HOM05D002045 ORTHO05D002014 6.8e-09 65.9 135 31.9
Nn3g19072 Nelumbo nucifera HOM05D002045 ORTHO05D002014 8.8e-09 65.5 191 32.5
Dinv43899 Davidia involucrata HOM05D002045 ORTHO05D002014 1.2e-08 65.1 132 35.6
TWI23G0662 Tripterygium wilfordii HOM05D002045 ORTHO05D002014 1.2e-08 65.1 161 28.6
Duzib205G0021 Durio zibethinus HOM05D002045 ORTHO05D002014 1.5e-08 64.7 129 33.3
QL04p056206 Quercus lobata HOM05D002045 ORTHO05D002014 1.5e-08 64.7 71 49.3
Duzib138G1945 Durio zibethinus HOM05D002045 ORTHO05D002014 2.0e-08 64.3 114 37.7
FAN06G0660 Fragaria x ananassa HOM05D002045 ORTHO05D002014 2.6e-08 63.9 105 34.3
TWI34G1380 Tripterygium wilfordii HOM05D002045 ORTHO05D002014 3.4e-08 63.5 111 36.0
CDE02G3823 Ceratophyllum demersum HOM05D002045 ORTHO05D002014 4.4e-08 63.2 183 28.4
DCAR_006968 Daucus carota HOM05D002045 ORTHO05D002014 4.4e-08 63.2 179 27.9
Duzib133G0749 Durio zibethinus HOM05D002045 ORTHO05D002014 4.4e-08 63.2 134 30.6
RcHm_v2.0_Chr1g0359001 Rosa chinensis HOM05D002045 ORTHO05D002014 4.4e-08 63.2 156 28.8
CiPaw.11G123700 Carya illinoinensis HOM05D002045 ORTHO05D002014 5.7e-08 62.8 176 29.5
COL.COLO4_06319 Corchorus olitorius HOM05D002045 ORTHO05D002014 5.7e-08 62.8 145 33.1
FAN10G4210 Fragaria x ananassa HOM05D002045 ORTHO05D002014 5.7e-08 62.8 105 33.3
Gohir.D12G114400 Gossypium hirsutum HOM05D002045 ORTHO05D002014 5.7e-08 62.8 135 31.1
Hma1.2p1_0952F.1_g240940 Hydrangea macrophylla HOM05D002045 ORTHO05D002014 5.7e-08 62.8 123 39.0
Gohir.A12G111100 Gossypium hirsutum HOM05D002045 ORTHO05D002014 7.5e-08 62.4 112 32.1
MD06G1102600 Malus domestica HOM05D002045 ORTHO05D002014 9.8e-08 62.0 103 39.8
Medtr7g117150 Medicago truncatula HOM05D002045 ORTHO05D002014 9.8e-08 62.0 110 35.5
Ciclev10018757m.g Citrus clementina HOM05D002045 ORTHO05D002014 1.3e-07 61.6 144 31.9
CsaV3_3G008240 Cucumis sativus L. HOM05D002045 ORTHO05D002014 1.3e-07 61.6 157 29.9
FvH4_7g16060 Fragaria vesca HOM05D002045 ORTHO05D002014 1.3e-07 61.6 156 28.8
Glyma.03G256300 Glycine max HOM05D002045 ORTHO05D002014 1.3e-07 61.6 110 34.5
Gohir.A11G095600 Gossypium hirsutum HOM05D002045 ORTHO05D002014 1.7e-07 61.2 143 30.8
SalBow3G2923 Salvia bowleyana HOM05D002045 ORTHO05D002014 1.7e-07 61.2 76 38.2
Zm00001eb382900 Zea mays HOM05D002045 ORTHO05D002014 1.7e-07 61.2 139 33.1
FAN06G2868 Fragaria x ananassa HOM05D002045 ORTHO05D002014 2.2e-07 60.8 156 28.8
Lj1g0007495 Lotus japonicus HOM05D002045 ORTHO05D002014 2.2e-07 60.8 171 28.7
GSVIVG01027058001 Vitis vinifera HOM05D002045 ORTHO05D002014 2.2e-07 60.8 128 32.8
MELO3C006044.2 Cucumis melo HOM05D002045 ORTHO05D002014 2.8e-07 60.5 157 29.9
FAN03G0742 Fragaria x ananassa HOM05D002045 ORTHO05D002014 2.8e-07 60.5 155 28.4
FAN10G1849 Fragaria x ananassa HOM05D002045 ORTHO05D002014 2.8e-07 60.5 156 28.2
Gorai.007G106800 Gossypium raimondii HOM05D002045 ORTHO05D002014 2.8e-07 60.5 143 30.8
HanXRQChr17g0562091 Helianthus annuus HOM05D002045 ORTHO05D002014 2.8e-07 60.5 121 29.8
Rhsim01G0170600 Rhododendron simsii HOM05D002045 ORTHO05D002014 2.8e-07 60.5 183 29.0
Thecc.01G346100 Theobroma cacao HOM05D002045 ORTHO05D002014 2.8e-07 60.5 136 31.6
Eucgr.E00071 Eucalyptus grandis HOM05D002045 ORTHO05D002014 3.7e-07 60.1 168 28.0
HanXRQChr16g0524031 Helianthus annuus HOM05D002045 ORTHO05D002014 3.7e-07 60.1 157 28.7
Ca_26753_v3 Cicer arietinum L. HOM05D002045 ORTHO05D002014 4.8e-07 59.7 119 31.1
Gohir.D11G100500 Gossypium hirsutum HOM05D002045 ORTHO05D002014 4.8e-07 59.7 143 30.1
Thecc.03G293500 Theobroma cacao HOM05D002045 ORTHO05D002014 4.8e-07 59.7 124 33.9
Glyma.07G057700 Glycine max HOM05D002045 ORTHO05D002014 6.3e-07 59.3 176 30.1
Lalb_Chr18g0044331 Lupinus albus HOM05D002045 ORTHO05D002014 6.3e-07 59.3 130 32.3
MD07G1146100 Malus domestica HOM05D002045 ORTHO05D002014 6.3e-07 59.3 127 29.1
Medtr0024s0020 Medicago truncatula HOM05D002045 ORTHO05D002014 6.3e-07 59.3 134 33.6
FAN01G0631 Fragaria x ananassa HOM05D002045 ORTHO05D002014 8.3e-07 58.9 156 28.2
Sed0015189 Sechium edule HOM05D002045 ORTHO05D002014 8.3e-07 58.9 165 31.5
THA.LOC104802062 Tarenaya hassleriana HOM05D002045 ORTHO05D002014 8.3e-07 58.9 141 29.8
TPR.G4779 Trifolium pratense HOM05D002045 ORTHO05D002014 8.3e-07 58.9 135 28.9
DCAR_025241 Daucus carota HOM05D002045 ORTHO05D002014 1.1e-06 58.5 123 32.5
MD01G1076900 Malus domestica HOM05D002045 ORTHO05D002014 1.1e-06 58.5 184 26.6
arahy.Tifrunner.gnm1.ann1.6FX6NP Arachis hypogaea HOM05D002045 ORTHO05D002014 1.4e-06 58.2 135 31.9
Psat4g160280 Pisum sativum HOM05D002045 ORTHO05D002014 1.4e-06 58.2 133 33.8
COL.COLO4_21715 Corchorus olitorius HOM05D002045 ORTHO05D002014 1.8e-06 57.8 230 25.7
Oeu022861.2 Olea europaea HOM05D002045 ORTHO05D002014 1.8e-06 57.8 233 27.5
Phvul.010G111600 Phaseolus vulgaris HOM05D002045 ORTHO05D002014 1.8e-06 57.8 142 30.3
CANSAT56G0136 Cannabis sativa HOM05D002045 ORTHO05D002014 2.4e-06 57.4 97 37.1
TAR636G0571 Trochodendron aralioides HOM05D002045 ORTHO05D002014 2.4e-06 57.4 101 39.6
vmacro22514 Vaccinium macrocarpon HOM05D002045 ORTHO05D002014 2.4e-06 57.4 71 45.1
VMungo0331G0345 Vigna mungo HOM05D002045 ORTHO05D002014 2.4e-06 57.4 113 32.7
Actinidia01394 Actinidia chinensis HOM05D002045 ORTHO05D002014 3.1e-06 57.0 373 24.1
Aa31LG1G27730 Aethionema arabicum HOM05D002045 ORTHO05D002014 3.1e-06 57.0 179 27.4
AT1G01440 Arabidopsis thaliana HOM05D002045 ORTHO05D002014 4.1e-06 56.6 85 37.6
EL10Ac5g12890 Beta vulgaris HOM05D002045 ORTHO05D002014 4.1e-06 56.6 139 31.7
Carub.0001s0082 Capsella rubella HOM05D002045 ORTHO05D002014 4.1e-06 56.6 86 36.0
Thhalv10028493m.g Eutrema salsugineum HOM05D002045 ORTHO05D002014 4.1e-06 56.6 150 31.3
Thhalv10007009m.g Eutrema salsugineum HOM05D002045 ORTHO05D002014 5.4e-06 56.2 117 32.5
arahy.Tifrunner.gnm1.ann1.RJBH5A Arachis hypogaea HOM05D002045 ORTHO05D002014 7.0e-06 55.8 135 31.9
ClCG07G014900 Citrullus lanatus HOM05D002045 ORTHO05D002014 7.0e-06 55.8 167 28.7
Sed0021460 Sechium edule HOM05D002045 ORTHO05D002014 7.0e-06 55.8 113 33.6
arahy.Tifrunner.gnm1.ann1.M6V3QK Arachis hypogaea HOM05D002045 ORTHO05D002014 9.1e-06 55.5 180 27.2
SGA_v2.0_scaffold5G02996 Striga asiatica HOM05D002045 ORTHO05D002014 9.1e-06 55.5 235 26.0


User provided reference genes

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