Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038444.3 Olea europaea HOM05D000144 ORTHO05D290730 3.8e-82 308.1 159 100.0
Oeu021023.1 Olea europaea HOM05D000144 ORTHO05D288244 3.4e-22 109.0 102 60.8
Oeu008265.1 Olea europaea HOM05D000144 ORTHO05D033733 1.1e-15 87.4 42 95.2
Oeu025664.3 Olea europaea HOM05D000144 ORTHO05D006641 5.8e-14 81.6 39 92.3
vmacro08749 Vaccinium macrocarpon HOM05D000144 ORTHO05D006641 2.9e-13 79.3 39 87.2
Oeu058560.1 Olea europaea HOM05D000144 ORTHO05D006641 6.4e-13 78.2 39 87.2
Oeu058561.1 Olea europaea HOM05D000144 ORTHO05D006641 6.4e-13 78.2 39 87.2
CSS0015780 Camellia sinensis var. sinensis HOM05D000144 ORTHO05D006641 8.4e-13 77.8 39 87.2
CDE04G1161 Ceratophyllum demersum HOM05D000144 ORTHO05D006641 1.1e-12 77.4 39 84.6
Dinv21168 Davidia involucrata HOM05D000144 ORTHO05D006641 1.9e-12 76.6 39 84.6
Nitab4.5_0000573g0110 Nicotiana tabacum HOM05D000144 ORTHO05D006641 1.9e-12 76.6 39 84.6
Peaxi162Scf00069g00214 Petunia axillaris HOM05D000144 ORTHO05D006641 1.9e-12 76.6 39 84.6
Rhsim04G0131000 Rhododendron simsii HOM05D000144 ORTHO05D006641 3.2e-12 75.9 39 84.6
Actinidia07914 Actinidia chinensis HOM05D000144 ORTHO05D006641 4.2e-12 75.5 39 82.1
Duzib093G0049 Durio zibethinus HOM05D000144 ORTHO05D006641 4.2e-12 75.5 39 82.1
Glyma.03G198200 Glycine max HOM05D000144 ORTHO05D006641 4.2e-12 75.5 39 82.1
Phvul.001G192400 Phaseolus vulgaris HOM05D000144 ORTHO05D006641 4.2e-12 75.5 39 82.1
PGR142G1211 Punica granatum HOM05D000144 ORTHO05D006641 4.2e-12 75.5 39 82.1
Thecc.05G095400 Theobroma cacao HOM05D000144 ORTHO05D006641 4.2e-12 75.5 39 82.1
VMungo1383G1355 Vigna mungo HOM05D000144 ORTHO05D006641 4.2e-12 75.5 39 82.1
Hma1.2p1_0769F.1_g215720 Hydrangea macrophylla HOM05D000144 ORTHO05D006641 5.4e-12 75.1 39 82.1
Lalb_Chr20g0111591 Lupinus albus HOM05D000144 ORTHO05D006641 5.4e-12 75.1 39 79.5
Nn6g34813 Nelumbo nucifera HOM05D000144 ORTHO05D006641 5.4e-12 75.1 39 79.5
Psat3g031520 Pisum sativum HOM05D000144 ORTHO05D006641 5.4e-12 75.1 39 79.5
Sed0021332 Sechium edule HOM05D000144 ORTHO05D006641 5.4e-12 75.1 39 79.5
TPR.G23317 Trifolium pratense HOM05D002773 ORTHO05D006641 5.4e-12 75.1 39 79.5
Cc06_g06170 Coffea canephora HOM05D000144 ORTHO05D006641 7.1e-12 74.7 39 82.1
Manes.09G052200 Manihot esculenta HOM05D000144 ORTHO05D006641 7.1e-12 74.7 39 82.1
Sabra16G0078100 Salix brachista HOM05D000144 ORTHO05D006641 7.1e-12 74.7 39 79.5
Sabra16G0081000 Salix brachista HOM05D000144 ORTHO05D006641 7.1e-12 74.7 39 79.5
GSVIVG01033892001 Vitis vinifera HOM05D000144 ORTHO05D006641 7.1e-12 74.7 39 79.5
Gohir.D01G194000 Gossypium hirsutum HOM05D000144 ORTHO05D006641 9.3e-12 74.3 39 79.5
Gorai.002G238100 Gossypium raimondii HOM05D000144 ORTHO05D006641 9.3e-12 74.3 39 79.5
PSO339G5571 Papaver somniferum HOM05D000144 ORTHO05D006641 9.3e-12 74.3 39 76.9
Prupe.7G101500 Prunus persica HOM05D000144 ORTHO05D006641 9.3e-12 74.3 39 79.5
Ca_09024_v3 Cicer arietinum L. HOM05D000144 ORTHO05D006641 1.2e-11 73.9 39 79.5
ClCG10G018730 Citrullus lanatus HOM05D000144 ORTHO05D006641 1.2e-11 73.9 39 79.5
MELO3C009493.2 Cucumis melo HOM05D000144 ORTHO05D006641 1.2e-11 73.9 39 79.5
CsaV3_3G037500 Cucumis sativus L. HOM05D000144 ORTHO05D006641 1.2e-11 73.9 39 79.5
FAN05G1768 Fragaria x ananassa HOM05D000144 ORTHO05D006641 1.2e-11 73.9 47 66.0
MD12G1030900 Malus domestica HOM05D000144 ORTHO05D006641 1.2e-11 73.9 39 79.5
HPP92_000054 Vanilla planifolia HOM05D000144 ORTHO05D006641 1.2e-11 73.9 39 79.5
Aqoxy2G01070 Aquilegia oxysepala HOM05D000144 ORTHO05D006641 1.6e-11 73.6 39 79.5
arahy.Tifrunner.gnm1.ann1.3FLQ2T Arachis hypogaea HOM05D000144 ORTHO05D006641 1.6e-11 73.6 39 79.5
arahy.Tifrunner.gnm1.ann1.I0B92H Arachis hypogaea HOM05D000144 ORTHO05D006641 1.6e-11 73.6 39 79.5
Glyma.19G196100 Glycine max HOM05D000144 ORTHO05D006641 1.6e-11 73.6 39 79.5
MD14G1031400 Malus domestica HOM05D000144 ORTHO05D006641 2.1e-11 73.2 36 86.1
Solyc09g010190.3 Solanum lycopersicum HOM05D000144 ORTHO05D006641 2.1e-11 73.2 39 82.1
Sopen09g004930 Solanum pennellii HOM05D000144 ORTHO05D006641 2.1e-11 73.2 39 82.1
PGSC0003DMG400008860 Solanum tuberosum HOM05D000144 ORTHO05D006641 2.1e-11 73.2 39 82.1
Ah.08g210410 Amaranthus hybridus HOM05D000144 ORTHO05D006641 2.7e-11 72.8 39 76.9
EL10Ac7g16869 Beta vulgaris HOM05D000144 ORTHO05D006641 2.7e-11 72.8 39 76.9
Potri.016G075600 Populus trichocarpa HOM05D000144 ORTHO05D006641 2.7e-11 72.8 39 76.9
Gohir.A01G204600 Gossypium hirsutum HOM05D000144 ORTHO05D006641 3.5e-11 72.4 39 76.9
Lsat_1_v5_gn_2_56480 Lactuca sativa HOM05D000144 ORTHO05D006641 3.5e-11 72.4 43 76.7
Os08g0559400 Oryza sativa ssp. japonica HOM05D000144 ORTHO05D006641 3.5e-11 72.4 39 76.9
RcHm_v2.0_Chr3g0474811 Rosa chinensis HOM05D000144 ORTHO05D006641 3.5e-11 72.4 39 76.9
TWI74G1271 Tripterygium wilfordii HOM05D000144 ORTHO05D006641 3.5e-11 72.4 39 76.9
CANSAT64G1969 Cannabis sativa HOM05D000144 ORTHO05D006641 4.6e-11 72.0 39 71.8
HanXRQChr14g0438361 Helianthus annuus HOM05D000144 ORTHO05D006641 4.6e-11 72.0 39 82.1
PSO801G0804 Papaver somniferum HOM05D000144 ORTHO05D006641 4.6e-11 72.0 39 74.4
TAR623G1099 Trochodendron aralioides HOM05D000144 ORTHO05D006641 4.6e-11 72.0 39 76.9
CARHR130370 Cardamine hirsuta HOM05D000144 ORTHO05D006641 6.0e-11 71.6 39 76.9
Lj1g0009347 Lotus japonicus HOM05D000144 ORTHO05D006641 6.0e-11 71.6 39 79.5
Medtr7g105220 Medicago truncatula HOM05D000144 ORTHO05D006641 6.0e-11 71.6 39 79.5
QL07p038139 Quercus lobata HOM05D000144 ORTHO05D006641 6.0e-11 71.6 39 76.9
THA.LOC104799753 Tarenaya hassleriana HOM05D000144 ORTHO05D006641 6.0e-11 71.6 39 79.5
ECA238G0760 Erigeron canadensis HOM05D000144 ORTHO05D006641 7.9e-11 71.2 43 76.7
Hund19895 Selenicereus undatus HOM05D000144 ORTHO05D006641 7.9e-11 71.2 44 68.2
Sc20g0006420 Simmondsia chinensis HOM05D000144 ORTHO05D006641 7.9e-11 71.2 39 74.4
MSTRG.19277 Avicennia marina HOM05D000144 ORTHO05D006641 1.0e-10 70.9 39 76.9
DCAR_020736 Daucus carota HOM05D000144 ORTHO05D006641 1.0e-10 70.9 39 76.9
FAN02G2043 Fragaria x ananassa HOM05D000144 ORTHO05D006641 1.0e-10 70.9 39 76.9
FAN05G0373 Fragaria x ananassa HOM05D000144 ORTHO05D006641 1.0e-10 70.9 39 76.9
FAN09G3615 Fragaria x ananassa HOM05D000144 ORTHO05D006641 1.0e-10 70.9 39 76.9
FAN14G3915 Fragaria x ananassa HOM05D000144 ORTHO05D006641 1.0e-10 70.9 39 76.9
Atru.BG.210.p Acer truncatum HOM05D000144 ORTHO05D006641 1.3e-10 70.5 39 74.4
BcaB02g09381 Brassica carinata HOM05D000144 ORTHO05D006641 1.3e-10 70.5 39 74.4
BcaB06g28917 Brassica carinata HOM05D000144 ORTHO05D006641 1.3e-10 70.5 39 74.4
BcaC02g11719 Brassica carinata HOM05D000144 ORTHO05D006641 1.3e-10 70.5 39 74.4
A05p09680 Brassica napus HOM05D000144 ORTHO05D006641 1.3e-10 70.5 39 74.4
C04p12020 Brassica napus HOM05D000144 ORTHO05D006641 1.3e-10 70.5 39 74.4
BolC4t22846H Brassica oleracea HOM05D000144 ORTHO05D006641 1.3e-10 70.5 39 74.4
BraA05t19924Z Brassica rapa HOM05D000144 ORTHO05D006641 1.3e-10 70.5 39 74.4
Carub.0004s1790 Capsella rubella HOM05D000144 ORTHO05D006641 1.3e-10 70.5 39 74.4
Cfa016646 Carpinus fangiana HOM05D000144 ORTHO05D006641 1.3e-10 70.5 39 74.4
CiPaw.09G017200 Carya illinoinensis HOM05D000144 ORTHO05D006641 1.3e-10 70.5 39 74.4
SalBow3G4068 Salvia bowleyana HOM05D000144 ORTHO05D006641 1.3e-10 70.5 39 76.9
Eucgr.K02569 Eucalyptus grandis HOM05D000144 ORTHO05D006641 1.7e-10 70.1 39 76.9
Sp4g18370 Schrenkiella parvula HOM05D000144 ORTHO05D006641 1.7e-10 70.1 39 71.8
TAR369G0302 Trochodendron aralioides HOM05D000144 ORTHO05D006641 1.7e-10 70.1 38 78.9
Aa31LG5G21270 Aethionema arabicum HOM05D000144 ORTHO05D006641 2.3e-10 69.7 38 76.3
AT2G36130 Arabidopsis thaliana HOM05D000144 ORTHO05D006641 2.3e-10 69.7 39 71.8
FvH4_6g19480 Fragaria vesca HOM05D000144 ORTHO05D006641 2.3e-10 69.7 39 74.4
SGA_v2.0_scaffold31G12892 Striga asiatica HOM05D000144 ORTHO05D006641 2.3e-10 69.7 39 74.4
Zm00001eb039360 Zea mays HOM05D000144 ORTHO05D006641 2.3e-10 69.7 39 76.9
Migut.J01001 Erythranthe guttata HOM05D000144 ORTHO05D006641 3.0e-10 69.3 39 71.8
AUR62006228 Chenopodium quinoa HOM05D000144 ORTHO05D006641 3.9e-10 68.9 39 71.8
Thhalv10017336m.g Eutrema salsugineum HOM05D000144 ORTHO05D006641 3.9e-10 68.9 39 74.4
MBI17_g04164_MAGBIO Magnolia biondii HOM05D000144 ORTHO05D006641 5.1e-10 68.6 39 74.4
SMO117G0290 Selaginella moellendorffii HOM05D000144 ORTHO05D006641 5.1e-10 68.6 43 67.4
Ciclev10012962m.g Citrus clementina HOM05D000144 ORTHO05D006641 6.6e-10 68.2 39 71.8
CAN.G397.88 Capsicum annuum HOM05D000144 ORTHO05D006641 8.7e-10 67.8 39 74.4
unitig_26.g9257 Utricularia gibba HOM05D000144 ORTHO05D006641 2.5e-09 66.2 39 71.8
Cpa.g.sc104.93 Carica papaya HOM05D000144 ORTHO05D006641 4.3e-09 65.5 39 74.4
MCO11G066 Micromonas commoda HOM05D000144 ORTHO05D006641 4.3e-09 65.5 35 80.0
SEGI_39454 Sequoiadendron giganteum HOM05D000144 ORTHO05D006641 5.6e-09 65.1 35 77.1
Cre12.g499400 Chlamydomonas reinhardtii HOM05D000144 ORTHO05D006641 7.3e-09 64.7 39 69.2
ATR0820G293 Amborella trichopoda HOM05D000144 ORTHO05D006641 9.6e-09 64.3 39 71.8
AagrBONN_evm.TU.Sc2ySwM_228.5575 Anthoceros agrestis HOM05D000144 ORTHO05D006641 9.6e-09 64.3 39 69.2
CDE12G0081 Ceratophyllum demersum HOM05D000144 ORTHO05D006641 1.6e-08 63.5 34 73.5
Lj5P127T28 Lonicera japonica HOM05D000144 ORTHO05D006641 2.1e-08 63.2 36 75.0
Mapoly0028s0032 Marchantia polymorpha HOM05D000144 ORTHO05D006641 2.8e-08 62.8 39 64.1
Pp3c22_5330 Physcomitrium patens HOM05D000144 ORTHO05D006641 8.1e-08 61.2 39 64.1
COL.COLO4_29671 Corchorus olitorius HOM05D000144 ORTHO05D006641 1.8e-07 60.1 31 77.4
MD08G1072300 Malus domestica HOM05D000144 ORTHO05D006641 4.5e-06 55.5 32 65.6


User provided reference genes

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