Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 6.0e-106 387.5 194 100.0
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 2.8e-71 272.3 194 74.7
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 2.4e-70 269.2 314 52.5
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 3.6e-50 202.2 118 78.8
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 1.0e-49 200.7 118 78.0
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 1.8e-49 199.9 118 81.4
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 1.8e-49 199.9 118 81.4
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 3.0e-49 199.1 118 77.1
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 5.2e-49 198.4 118 79.7
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 5.2e-49 198.4 118 77.1
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 1.2e-48 197.2 117 76.9
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 1.2e-48 197.2 118 78.8
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 1.2e-48 197.2 128 75.0
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 1.2e-48 197.2 118 76.3
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 1.5e-48 196.8 118 76.3
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 1.5e-48 196.8 118 79.7
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 2.0e-48 196.4 118 77.1
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 2.0e-48 196.4 118 78.0
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 2.0e-48 196.4 118 75.4
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 2.6e-48 196.1 118 76.3
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 2.6e-48 196.1 118 76.3
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 3.4e-48 195.7 118 79.7
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 3.4e-48 195.7 118 78.8
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 5.7e-48 194.9 117 78.6
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 5.7e-48 194.9 128 73.4
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 7.5e-48 194.5 118 78.0
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 7.5e-48 194.5 128 73.4
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 7.5e-48 194.5 128 73.4
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 7.5e-48 194.5 128 73.4
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 7.5e-48 194.5 118 78.8
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 7.5e-48 194.5 118 75.4
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 7.5e-48 194.5 128 72.7
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 1.3e-47 193.7 118 77.1
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 1.7e-47 193.4 128 72.7
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 1.7e-47 193.4 128 72.7
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 1.7e-47 193.4 117 77.8
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 2.2e-47 193.0 128 72.7
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 2.2e-47 193.0 128 72.7
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 2.2e-47 193.0 118 78.0
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 2.2e-47 193.0 117 78.6
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 2.2e-47 193.0 118 77.1
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 2.9e-47 192.6 128 71.1
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 2.9e-47 192.6 118 77.1
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 3.7e-47 192.2 118 78.0
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 3.7e-47 192.2 118 76.3
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 4.9e-47 191.8 118 77.1
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 4.9e-47 191.8 118 77.1
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 6.4e-47 191.4 132 69.7
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 8.3e-47 191.0 118 77.1
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 8.3e-47 191.0 117 77.8
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 8.3e-47 191.0 118 74.6
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 1.1e-46 190.7 118 74.6
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 1.4e-46 190.3 118 77.1
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 1.8e-46 189.9 118 74.6
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 1.8e-46 189.9 118 75.4
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 3.2e-46 189.1 118 76.3
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 7.0e-46 188.0 118 73.7
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 9.2e-46 187.6 128 69.5
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 9.2e-46 187.6 128 69.5
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 9.2e-46 187.6 117 72.6
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 1.6e-45 186.8 118 74.6
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 3.5e-45 185.7 128 71.1
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 3.5e-45 185.7 118 71.2
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 3.5e-45 185.7 110 78.2
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 4.6e-45 185.3 128 68.8
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 7.8e-45 184.5 128 68.8
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 1.0e-44 184.1 118 72.0
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 1.3e-44 183.7 118 71.2
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 1.7e-44 183.3 118 72.9
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 1.7e-44 183.3 118 72.9
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 1.7e-44 183.3 118 72.0
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 3.0e-44 182.6 117 71.8
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 3.9e-44 182.2 117 73.5
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 3.9e-44 182.2 118 72.9
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 6.6e-44 181.4 118 72.0
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 1.5e-43 180.3 117 70.9
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 1.9e-43 179.9 118 72.0
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 1.9e-43 179.9 117 71.8
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 2.5e-43 179.5 118 71.2
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 2.5e-43 179.5 117 70.9
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 2.5e-43 179.5 117 70.1
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 4.3e-43 178.7 117 68.4
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 4.3e-43 178.7 118 70.3
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 1.6e-42 176.8 118 69.5
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 6.8e-41 171.4 119 66.4
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 5.8e-40 168.3 119 64.7
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 9.8e-40 167.5 126 59.5
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 1.7e-39 166.8 120 68.3
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 6.4e-39 164.9 117 65.8
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 6.6e-36 154.8 117 64.1
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 1.9e-35 153.3 126 55.6
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 4.3e-35 152.1 118 61.0
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 1.1e-33 147.5 85 81.2
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 1.1e-33 147.5 87 79.3
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 1.8e-33 146.7 126 55.6
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 3.1e-33 146.0 126 51.6
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 8.3e-31 137.9 87 71.3
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 7.8e-29 131.3 118 58.5
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 7.8e-29 131.3 112 58.9
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 2.3e-28 129.8 125 48.8
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 1.1e-27 127.5 77 79.2
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 9.5e-27 124.4 78 70.5
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 1.2e-24 117.5 105 46.7
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 2.2e-23 113.2 126 45.2
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 2.2e-23 113.2 126 43.7
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 1.2e-21 107.5 64 78.1
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 7.8e-21 104.8 88 64.8
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 1.0e-20 104.4 74 66.2
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 5.1e-20 102.1 147 40.1
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 9.6e-19 97.8 66 68.2
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 1.3e-10 70.9 39 82.1
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 1.3e-10 70.9 45 64.4
BcaNung00695 Brassica carinata HOM05D000342 ORTHO05D000217 2.9e-07 59.7 31 87.1


User provided reference genes

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