Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037326.2 Olea europaea HOM05D004579 ORTHO05D005376 5.2e-143 511.1 277 100.0
MSTRG.11672 Avicennia marina HOM05D004579 ORTHO05D005376 2.3e-66 256.5 278 56.1
Dinv23423 Davidia involucrata HOM05D004579 ORTHO05D005376 9.6e-65 251.1 276 55.8
Migut.A00154 Erythranthe guttata HOM05D004579 ORTHO05D005376 1.7e-61 240.4 275 54.9
DCAR_019057 Daucus carota HOM05D004579 ORTHO05D005376 6.5e-61 238.4 280 55.7
Oeu018654.1 Olea europaea HOM05D004579 ORTHO05D005376 6.5e-61 238.4 200 70.5
CSS0030937 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 2.5e-60 236.5 280 52.1
Dinv27966 Davidia involucrata HOM05D004579 ORTHO05D005376 6.7e-58 228.4 276 50.0
Hma1.2p1_1266F.1_g271430 Hydrangea macrophylla HOM05D004579 ORTHO05D005376 1.1e-57 227.6 276 52.5
Peaxi162Scf00436g00719 Petunia axillaris HOM05D004579 ORTHO05D005376 1.5e-57 227.3 279 51.6
Nitab4.5_0000359g0090 Nicotiana tabacum HOM05D004579 ORTHO05D005376 1.6e-56 223.8 281 54.1
Cc08_g10350 Coffea canephora HOM05D004579 ORTHO05D005376 3.7e-56 222.6 279 50.5
Nitab4.5_0008290g0030 Nicotiana tabacum HOM05D004579 ORTHO05D005376 3.7e-56 222.6 275 52.7
Nitab4.5_0006174g0020 Nicotiana tabacum HOM05D004579 ORTHO05D005376 6.3e-56 221.9 281 53.7
SalBow4G3199 Salvia bowleyana HOM05D004579 ORTHO05D005376 1.4e-55 220.7 283 54.8
Rhsim07G0143600 Rhododendron simsii HOM05D004579 ORTHO05D005376 1.8e-55 220.3 293 48.8
CAN.G1226.13 Capsicum annuum HOM05D004579 ORTHO05D005376 2.0e-54 216.9 283 49.1
CiPaw.15G041800 Carya illinoinensis HOM05D004579 ORTHO05D005376 2.6e-54 216.5 280 49.3
unitig_736.g22340 Utricularia gibba HOM05D004579 ORTHO05D005376 3.4e-54 216.1 275 47.3
Cfa017933 Carpinus fangiana HOM05D004579 ORTHO05D005376 1.0e-53 214.5 282 49.3
HanXRQChr08g0226451 Helianthus annuus HOM05D004579 ORTHO05D005376 1.3e-53 214.2 276 50.7
HanXRQChr08g0226601 Helianthus annuus HOM05D004579 ORTHO05D005376 1.3e-53 214.2 276 50.7
PGSC0003DMG400005151 Solanum tuberosum HOM05D004579 ORTHO05D005376 2.5e-52 209.9 273 52.0
SGA_v2.0_scaffold88G27218 Striga asiatica HOM05D004579 ORTHO05D005376 2.5e-52 209.9 277 50.5
Haze_18215 Corylus avellana HOM05D004579 ORTHO05D005376 4.2e-52 209.1 317 46.4
Solyc04g080350.4 Solanum lycopersicum HOM05D004579 ORTHO05D005376 5.5e-52 208.8 275 50.5
Lsat_1_v5_gn_6_7421 Lactuca sativa HOM05D004579 ORTHO05D005376 1.2e-51 207.6 279 47.3
Sopen04g033940 Solanum pennellii HOM05D004579 ORTHO05D005376 7.9e-51 204.9 269 49.8
Duzib168G1792 Durio zibethinus HOM05D004579 ORTHO05D005376 3.9e-50 202.6 279 47.0
Glyma.04G049800 Glycine max HOM05D004579 ORTHO05D005376 3.9e-50 202.6 279 46.6
TWI34G1837 Tripterygium wilfordii HOM05D004579 ORTHO05D005376 5.1e-50 202.2 288 46.2
GSVIVG01035344001 Vitis vinifera HOM05D004579 ORTHO05D005376 6.7e-50 201.8 200 57.5
Psat5g036520 Pisum sativum HOM05D004579 ORTHO05D005376 8.8e-50 201.4 283 45.9
Manes.16G077900 Manihot esculenta HOM05D004579 ORTHO05D005376 1.1e-49 201.1 289 49.5
Glyma.06G050800 Glycine max HOM05D004579 ORTHO05D005376 1.5e-49 200.7 279 47.0
Thecc.09G051200 Theobroma cacao HOM05D004579 ORTHO05D005376 1.5e-49 200.7 282 48.6
TPR.G13109 Trifolium pratense HOM05D004579 ORTHO05D005376 2.6e-49 199.9 278 50.7
Prupe.1G414900 Prunus persica HOM05D004579 ORTHO05D005376 3.3e-49 199.5 286 45.1
arahy.Tifrunner.gnm1.ann1.C5JVH4 Arachis hypogaea HOM05D004579 ORTHO05D005376 9.7e-49 198.0 284 45.1
QL02p103256 Quercus lobata HOM05D004579 ORTHO05D005376 1.3e-48 197.6 278 45.0
QL07p000612 Quercus lobata HOM05D004579 ORTHO05D005376 1.7e-48 197.2 281 45.2
Hund03357 Selenicereus undatus HOM05D004579 ORTHO05D005376 1.7e-48 197.2 292 48.3
Ca_15870_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 2.2e-48 196.8 282 43.6
Gohir.A05G043900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 2.8e-48 196.4 282 51.8
Sc09g0009680 Simmondsia chinensis HOM05D004579 ORTHO05D005376 4.8e-48 195.7 277 48.7
Atru.chr7.2020 Acer truncatum HOM05D004579 ORTHO05D005376 6.3e-48 195.3 283 44.2
CANSAT25G0619 Cannabis sativa HOM05D004579 ORTHO05D005376 8.2e-48 194.9 282 48.6
TAR383G0831 Trochodendron aralioides HOM05D004579 ORTHO05D005376 8.2e-48 194.9 285 42.8
arahy.Tifrunner.gnm1.ann1.XC2JTE Arachis hypogaea HOM05D004579 ORTHO05D005376 1.1e-47 194.5 284 45.8
Manes.03G046600 Manihot esculenta HOM05D004579 ORTHO05D005376 1.1e-47 194.5 284 42.6
vmacro05280 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 1.8e-47 193.7 368 40.8
Actinidia14703 Actinidia chinensis HOM05D004579 ORTHO05D005376 2.4e-47 193.4 207 52.7
MELO3C022510.2 Cucumis melo HOM05D004579 ORTHO05D005376 9.1e-47 191.4 281 44.1
ECA233G0431 Erigeron canadensis HOM05D004579 ORTHO05D005376 9.1e-47 191.4 279 48.7
HanXRQChr09g0251171 Helianthus annuus HOM05D004579 ORTHO05D005376 1.2e-46 191.0 258 51.6
arahy.Tifrunner.gnm1.ann1.Y2NPND Arachis hypogaea HOM05D004579 ORTHO05D005376 2.0e-46 190.3 287 47.4
Phvul.009G076200 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 2.6e-46 189.9 280 44.6
Duzib187G0056 Durio zibethinus HOM05D004579 ORTHO05D005376 5.9e-46 188.7 285 47.4
Potri.006G232800 Populus trichocarpa HOM05D004579 ORTHO05D005376 5.9e-46 188.7 291 48.1
Gorai.009G046700 Gossypium raimondii HOM05D004579 ORTHO05D005376 1.0e-45 188.0 282 50.0
Lj1g0026801 Lotus japonicus HOM05D004579 ORTHO05D005376 1.3e-45 187.6 303 41.9
ClCG06G000280 Citrullus lanatus HOM05D004579 ORTHO05D005376 1.7e-45 187.2 288 44.1
Gohir.D05G045500 Gossypium hirsutum HOM05D004579 ORTHO05D005376 1.7e-45 187.2 282 50.0
FAN15G2153 Fragaria x ananassa HOM05D004579 ORTHO05D005376 2.2e-45 186.8 293 43.7
arahy.Tifrunner.gnm1.ann1.A3GFYF Arachis hypogaea HOM05D004579 ORTHO05D005376 2.9e-45 186.4 287 46.7
FAN24G0041 Fragaria x ananassa HOM05D004579 ORTHO05D005376 5.0e-45 185.7 290 44.5
FAN20G3218 Fragaria x ananassa HOM05D004579 ORTHO05D005376 6.5e-45 185.3 287 43.9
Gohir.D07G022900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 8.5e-45 184.9 281 42.3
FvH4_2g32180 Fragaria vesca HOM05D004579 ORTHO05D005376 1.1e-44 184.5 290 45.2
Gorai.001G023600 Gossypium raimondii HOM05D004579 ORTHO05D005376 1.4e-44 184.1 281 42.0
Eucgr.C00634 Eucalyptus grandis HOM05D004579 ORTHO05D005376 1.9e-44 183.7 283 47.0
Sabra06G0181300 Salix brachista HOM05D004579 ORTHO05D005376 5.5e-44 182.2 296 46.3
Ciclev10009210m.g Citrus clementina HOM05D004579 ORTHO05D005376 9.4e-44 181.4 293 46.8
Medtr1g016630 Medicago truncatula HOM05D004579 ORTHO05D005376 9.4e-44 181.4 287 41.8
Ah.11g044630 Amaranthus hybridus HOM05D004579 ORTHO05D005376 1.6e-43 180.6 286 44.4
FAN27G3258 Fragaria x ananassa HOM05D004579 ORTHO05D005376 2.1e-43 180.3 287 43.2
TWI63G0708 Tripterygium wilfordii HOM05D004579 ORTHO05D005376 2.1e-43 180.3 290 47.2
CsaV3_6G006070 Cucumis sativus L. HOM05D004579 ORTHO05D005376 2.7e-43 179.9 280 43.6
Glyma.14G092900 Glycine max HOM05D004579 ORTHO05D005376 6.1e-43 178.7 282 44.7
Nn8g38954 Nelumbo nucifera HOM05D004579 ORTHO05D005376 6.1e-43 178.7 279 40.9
Aqoxy7G00927 Aquilegia oxysepala HOM05D004579 ORTHO05D005376 2.3e-42 176.8 293 40.6
COL.COLO4_21028 Corchorus olitorius HOM05D004579 ORTHO05D005376 6.7e-42 175.3 282 39.7
TAR626G1184 Trochodendron aralioides HOM05D004579 ORTHO05D005376 1.5e-41 174.1 237 50.6
Sed0005208 Sechium edule HOM05D004579 ORTHO05D005376 2.0e-41 173.7 284 41.2
VMungo0647G1140 Vigna mungo HOM05D004579 ORTHO05D005376 2.0e-41 173.7 275 43.3
AUR62022041 Chenopodium quinoa HOM05D004579 ORTHO05D005376 2.6e-41 173.3 193 51.3
PGR031G0410 Punica granatum HOM05D004579 ORTHO05D005376 2.6e-41 173.3 270 41.9
Lalb_Chr24g0399591 Lupinus albus HOM05D004579 ORTHO05D005376 5.7e-41 172.2 276 44.6
Sed0027918 Sechium edule HOM05D004579 ORTHO05D005376 1.3e-40 171.0 204 47.1
VMungo1309G2710 Vigna mungo HOM05D004579 ORTHO05D005376 2.2e-40 170.2 284 45.8
EL10Ac2g03929 Beta vulgaris HOM05D004579 ORTHO05D005376 6.3e-40 168.7 281 40.2
Ca_02416_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 8.2e-40 168.3 283 45.9
Psat6g019640 Pisum sativum HOM05D004579 ORTHO05D005376 8.2e-40 168.3 289 39.1
FAN24G1203 Fragaria x ananassa HOM05D004579 ORTHO05D005376 1.4e-39 167.5 287 40.1
Lalb_Chr22g0355991 Lupinus albus HOM05D004579 ORTHO05D005376 1.8e-39 167.2 284 41.5
CDE02G1740 Ceratophyllum demersum HOM05D004579 ORTHO05D005376 3.1e-39 166.4 267 42.3
PSO210G6474 Papaver somniferum HOM05D004579 ORTHO05D005376 5.3e-39 165.6 302 42.1
Aa31LG8G7240 Aethionema arabicum HOM05D004579 ORTHO05D005376 1.6e-38 164.1 276 40.2
PSO210G6518 Papaver somniferum HOM05D004579 ORTHO05D005376 7.7e-38 161.8 302 40.7
Hund19474 Selenicereus undatus HOM05D004579 ORTHO05D005376 1.0e-37 161.4 366 40.4
Os01g0559200 Oryza sativa ssp. japonica HOM05D004579 ORTHO05D005376 5.0e-37 159.1 296 43.9
Lj5g0003794 Lotus japonicus HOM05D004579 ORTHO05D005376 1.5e-36 157.5 282 45.4
BcaC05g28330 Brassica carinata HOM05D004579 ORTHO05D005376 7.2e-36 155.2 298 37.2
BolC5t33107H Brassica oleracea HOM05D004579 ORTHO05D005376 7.2e-36 155.2 298 37.2
BcaB06g26108 Brassica carinata HOM05D004579 ORTHO05D005376 9.4e-36 154.8 285 37.5
C05p43910 Brassica napus HOM05D004579 ORTHO05D005376 9.4e-36 154.8 298 41.3
CSS0042880 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 1.2e-35 154.5 180 51.1
Thhalv10021403m.g Eutrema salsugineum HOM05D004579 ORTHO05D005376 2.1e-35 153.7 285 41.1
PGR142G1482 Punica granatum HOM05D004579 ORTHO05D005376 2.1e-35 153.7 270 38.5
CARHR096140 Cardamine hirsuta HOM05D004579 ORTHO05D005376 2.7e-35 153.3 281 42.3
Gohir.A07G022140 Gossypium hirsutum HOM05D004579 ORTHO05D005376 2.7e-35 153.3 245 39.6
BraA05t21726Z Brassica rapa HOM05D004579 ORTHO05D005376 6.1e-35 152.1 294 37.8
Nn6g35393 Nelumbo nucifera HOM05D004579 ORTHO05D005376 6.1e-35 152.1 270 41.1
Carub.0003s2037 Capsella rubella HOM05D004579 ORTHO05D005376 8.0e-35 151.8 281 39.5
ATR0789G072 Amborella trichopoda HOM05D004579 ORTHO05D005376 1.8e-34 150.6 286 37.8
A05p28470 Brassica napus HOM05D004579 ORTHO05D005376 1.8e-34 150.6 297 38.0
AT3G20430 Arabidopsis thaliana HOM05D004579 ORTHO05D005376 2.3e-34 150.2 278 39.9
MBI01_g16584_MAGBIO Magnolia biondii HOM05D004579 ORTHO05D005376 3.0e-34 149.8 289 37.4
THA.LOC104811250 Tarenaya hassleriana HOM05D004579 ORTHO05D005376 1.2e-33 147.9 186 45.7
Sp3g18440 Schrenkiella parvula HOM05D004579 ORTHO05D005376 3.3e-33 146.4 291 40.9
AL3G34150 Arabidopsis lyrata HOM05D004579 ORTHO05D005376 5.7e-33 145.6 278 41.7
PSO017G1019 Papaver somniferum HOM05D004579 ORTHO05D005376 7.5e-33 145.2 198 43.4
HPP92_014384 Vanilla planifolia HOM05D004579 ORTHO05D005376 7.5e-33 145.2 278 42.1
Zm00001eb356770 Zea mays HOM05D004579 ORTHO05D005376 3.7e-32 142.9 273 40.3
MSTRG.25939 Avicennia marina HOM05D004579 ORTHO05D005376 5.9e-30 135.6 173 51.4
PSO063G4337 Papaver somniferum HOM05D004579 ORTHO05D005376 2.2e-29 133.7 223 38.1
TPR.G25353 Trifolium pratense HOM05D004579 ORTHO05D005376 6.5e-29 132.1 130 55.4
vmacro00165 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 3.0e-26 123.2 278 35.6
AUR62009186 Chenopodium quinoa HOM05D004579 ORTHO05D005376 5.2e-26 122.5 118 55.9
RcHm_v2.0_Chr6g0310501 Rosa chinensis HOM05D004579 ORTHO05D005376 1.2e-22 111.3 140 47.1
SEGI_10906 Sequoiadendron giganteum HOM05D004579 ORTHO05D005376 1.3e-21 107.8 326 28.5
PGSC0003DMG400032806 Solanum tuberosum HOM05D004579 ORTHO05D005376 1.1e-20 104.8 69 75.4
Actinidia18195 Actinidia chinensis HOM05D004579 ORTHO05D005376 1.9e-20 104.0 122 59.0
Cpa.g.sc84.21 Carica papaya HOM05D004579 ORTHO05D005376 6.1e-19 99.0 268 32.8
Hma1.2p1_1944F.1_g308530 Hydrangea macrophylla HOM05D004579 ORTHO05D005376 8.8e-18 95.1 125 44.0
arahy.Tifrunner.gnm1.ann1.E1I8FT Arachis hypogaea HOM05D004579 ORTHO05D005376 4.4e-17 92.8 125 45.6
RcHm_v2.0_Chr6g0310491 Rosa chinensis HOM05D004579 ORTHO05D005376 1.1e-15 88.2 124 53.2
Phvul.001G033700 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 1.2e-14 84.7 89 50.6
AagrBONN_evm.TU.Sc2ySwM_117.2939 Anthoceros agrestis HOM05D004579 ORTHO05D005376 1.1e-12 78.2 224 28.1
vmacro00163 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 5.6e-12 75.9 218 34.9
CBR_g36456 Chara braunii HOM05D004579 ORTHO05D005376 1.6e-11 74.3 123 35.0
Mapoly0091s0021 Marchantia polymorpha HOM05D004579 ORTHO05D005376 2.3e-10 70.5 123 36.6
Pp3c10_2240 Physcomitrium patens HOM05D004579 ORTHO05D005376 4.4e-09 66.2 128 35.2
TPR.G25355 Trifolium pratense HOM05D004579 ORTHO05D005376 7.5e-09 65.5 125 44.0
PSO017G0877 Papaver somniferum HOM05D004579 ORTHO05D005376 1.3e-08 64.7 69 49.3
PSO017G5975 Papaver somniferum HOM05D004579 ORTHO05D005376 1.3e-08 64.7 69 49.3
QL03p011522 Quercus lobata HOM05D004579 ORTHO05D005376 4.1e-07 59.7 41 68.3
Rhsim01G0128100 Rhododendron simsii HOM05D033462 ORTHO05D011520 2.0e-06 57.4 130 34.6


User provided reference genes

Program Settings