Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037219.1 Olea europaea HOM05D004103 ORTHO05D005242 7.3e-74 280.4 137 100.0
Dinv21305 Davidia involucrata HOM05D004103 ORTHO05D005242 2.3e-35 152.5 140 57.9
Lj1A797G65 Lonicera japonica HOM05D004103 ORTHO05D005242 9.4e-29 130.6 132 49.2
Cc00_g16050 Coffea canephora HOM05D004103 ORTHO05D005242 3.7e-25 118.6 132 41.7
DCAR_019676 Daucus carota HOM05D004103 ORTHO05D005242 4.8e-25 118.2 143 46.2
QL04p068062 Quercus lobata HOM05D004103 ORTHO05D005242 1.6e-23 113.2 141 46.1
Actinidia07861 Actinidia chinensis HOM05D004103 ORTHO05D005242 1.0e-22 110.5 90 58.9
Rhsim06G0177100 Rhododendron simsii HOM05D004103 ORTHO05D005242 1.1e-21 107.1 102 50.0
CSS0030605 Camellia sinensis var. sinensis HOM05D004103 ORTHO05D005242 1.5e-21 106.7 89 58.4
vmacro12077 Vaccinium macrocarpon HOM05D004103 ORTHO05D005242 1.9e-21 106.3 118 46.6
Nn1g07514 Nelumbo nucifera HOM05D004103 ORTHO05D005242 5.5e-21 104.8 120 42.5
Lsat_1_v5_gn_9_103601 Lactuca sativa HOM05D004103 ORTHO05D005242 1.2e-20 103.6 96 49.0
Aqoxy4G02289 Aquilegia oxysepala HOM05D004103 ORTHO05D005242 1.2e-18 97.1 90 48.9
ECA240G0272 Erigeron canadensis HOM05D004103 ORTHO05D005242 2.0e-18 96.3 139 40.3
Sc21g0000570 Simmondsia chinensis HOM05D004103 ORTHO05D005242 4.4e-18 95.1 100 44.0
Atru.chr2.3690 Acer truncatum HOM05D004103 ORTHO05D005242 1.7e-17 93.2 103 40.8
HanXRQChr03g0075041 Helianthus annuus HOM05D004103 ORTHO05D005242 2.2e-17 92.8 89 49.4
MD03G1179400 Malus domestica HOM05D004103 ORTHO05D005242 2.2e-17 92.8 113 37.2
MD11G1199100 Malus domestica HOM05D004103 ORTHO05D005242 2.2e-17 92.8 113 38.9
MBI14_g08099_MAGBIO Magnolia biondii HOM05D004103 ORTHO05D005242 3.7e-17 92.0 93 47.3
Rhsim06G0229800 Rhododendron simsii HOM05D004103 ORTHO05D005242 3.7e-17 92.0 124 37.1
Haze_09826 Corylus avellana HOM05D004103 ORTHO05D005242 4.8e-17 91.7 123 35.8
RcHm_v2.0_Chr5g0053471 Rosa chinensis HOM05D004103 ORTHO05D005242 6.3e-17 91.3 88 44.3
Dinv40861 Davidia involucrata HOM05D004103 ORTHO05D005242 8.3e-17 90.9 87 44.8
QL08p004112 Quercus lobata HOM05D004103 ORTHO05D005242 1.1e-16 90.5 120 37.5
CiPaw.11G204100 Carya illinoinensis HOM05D004103 ORTHO05D005242 1.8e-16 89.7 123 39.0
CDE10G0035 Ceratophyllum demersum HOM05D004103 ORTHO05D005242 1.8e-16 89.7 114 40.4
ClCG09G021370 Citrullus lanatus HOM05D004103 ORTHO05D005242 1.8e-16 89.7 113 38.1
PSO541G4137 Papaver somniferum HOM05D004103 ORTHO05D005242 1.8e-16 89.7 87 47.1
Prupe.4G243700 Prunus persica HOM05D004103 ORTHO05D005242 2.4e-16 89.4 113 36.3
CDE10G0306 Ceratophyllum demersum HOM05D004103 ORTHO05D005242 4.1e-16 88.6 88 44.3
ATR0691G219 Amborella trichopoda HOM05D004103 ORTHO05D005242 7.0e-16 87.8 89 46.1
CiPaw.12G138300 Carya illinoinensis HOM05D004103 ORTHO05D005242 7.0e-16 87.8 125 35.2
CsaV3_7G011360 Cucumis sativus L. HOM05D004103 ORTHO05D005242 9.1e-16 87.4 114 36.0
Cfa020190 Carpinus fangiana HOM05D004103 ORTHO05D005242 1.2e-15 87.0 123 35.0
MELO3C024942.2 Cucumis melo HOM05D004103 ORTHO05D005242 1.2e-15 87.0 114 36.8
GSVIVG01014688001 Vitis vinifera HOM05D004103 ORTHO05D005242 1.6e-15 86.7 89 39.3
FvH4_3g29170 Fragaria vesca HOM05D004103 ORTHO05D005242 3.5e-15 85.5 89 40.4
FAN11G2140 Fragaria x ananassa HOM05D004103 ORTHO05D005242 3.5e-15 85.5 89 40.4
EL10Ac9g22672 Beta vulgaris HOM05D004103 ORTHO05D005242 4.5e-15 85.1 90 46.7
FAN25G3398 Fragaria x ananassa HOM05D004103 ORTHO05D005242 5.9e-15 84.7 89 40.4
Actinidia05004 Actinidia chinensis HOM05D004103 ORTHO05D005242 7.7e-15 84.3 108 39.8
Hma1.2p1_1402F.1_g281120 Hydrangea macrophylla HOM05D004103 ORTHO05D005242 1.0e-14 84.0 121 35.5
PSO675G6166 Papaver somniferum HOM05D004103 ORTHO05D005242 1.0e-14 84.0 119 39.5
PGR083G2215 Punica granatum HOM05D004103 ORTHO05D005242 1.0e-14 84.0 94 38.3
CSS0020645 Camellia sinensis var. sinensis HOM05D004103 ORTHO05D005242 1.3e-14 83.6 90 38.9
FAN21G3724 Fragaria x ananassa HOM05D004103 ORTHO05D005242 2.2e-14 82.8 89 40.4
Sed0001626 Sechium edule HOM05D004103 ORTHO05D005242 2.9e-14 82.4 131 38.2
vmacro11590 Vaccinium macrocarpon HOM05D004103 ORTHO05D005242 2.9e-14 82.4 124 33.9
Potri.001G368100 Populus trichocarpa HOM05D004103 ORTHO05D005242 5.0e-14 81.6 92 42.4
Migut.M01651 Erythranthe guttata HOM05D004103 ORTHO05D005242 6.5e-14 81.3 86 43.0
Phvul.006G057700 Phaseolus vulgaris HOM05D004103 ORTHO05D005242 6.5e-14 81.3 121 33.9
Lj6g0015560 Lotus japonicus HOM05D004103 ORTHO05D005242 8.5e-14 80.9 86 39.5
Duzib213G0942 Durio zibethinus HOM05D004103 ORTHO05D005242 1.5e-13 80.1 97 40.2
HanXRQChr05g0160111 Helianthus annuus HOM05D004103 ORTHO05D005242 2.5e-13 79.3 111 33.3
Peaxi162Scf00139g01322 Petunia axillaris HOM05D004103 ORTHO05D005242 2.5e-13 79.3 114 32.5
ECA246G0435 Erigeron canadensis HOM05D004103 ORTHO05D005242 3.2e-13 79.0 130 32.3
Ciclev10008206m.g Citrus clementina HOM05D004103 ORTHO05D005242 4.2e-13 78.6 98 37.8
Eucgr.F02047 Eucalyptus grandis HOM05D004103 ORTHO05D005242 4.2e-13 78.6 122 33.6
FAN16G2423 Fragaria x ananassa HOM05D004103 ORTHO05D005242 4.2e-13 78.6 116 35.3
FAN16G2922 Fragaria x ananassa HOM05D004103 ORTHO05D005242 4.2e-13 78.6 116 35.3
Thecc.07G013500 Theobroma cacao HOM05D004103 ORTHO05D005242 4.2e-13 78.6 97 41.2
CANSAT11G1558 Cannabis sativa HOM05D004103 ORTHO05D005242 5.5e-13 78.2 89 34.8
Cpa.g.sc12.139 Carica papaya HOM05D004103 ORTHO05D005242 5.5e-13 78.2 122 38.5
Sabra16G0241200 Salix brachista HOM05D004103 ORTHO05D005242 5.5e-13 78.2 92 39.1
Oeu005958.1 Olea europaea HOM05D004103 ORTHO05D005242 7.2e-13 77.8 127 33.9
Ca_22143_v3 Cicer arietinum L. HOM05D004103 ORTHO05D005242 9.4e-13 77.4 122 34.4
Glyma.18G076300 Glycine max HOM05D004103 ORTHO05D005242 9.4e-13 77.4 121 33.1
SGA_v2.0_scaffold171G38864 Striga asiatica HOM05D004103 ORTHO05D005242 9.4e-13 77.4 87 36.8
COL.COLO4_09834 Corchorus olitorius HOM05D004103 ORTHO05D005242 1.2e-12 77.0 86 39.5
Lsat_1_v5_gn_5_1860 Lactuca sativa HOM05D004103 ORTHO05D005242 1.6e-12 76.6 91 39.6
Lj1A890G48 Lonicera japonica HOM05D004103 ORTHO05D005242 2.1e-12 76.3 131 33.6
Lalb_Chr15g0082151 Lupinus albus HOM05D004103 ORTHO05D005242 2.7e-12 75.9 119 33.6
TPR.G796 Trifolium pratense HOM05D004103 ORTHO05D005242 2.7e-12 75.9 121 32.2
Medtr3g460800 Medicago truncatula HOM05D004103 ORTHO05D005242 3.6e-12 75.5 121 32.2
PGSC0003DMG400022278 Solanum tuberosum HOM05D004103 ORTHO05D005242 3.6e-12 75.5 87 34.5
SalBow8G0562 Salvia bowleyana HOM05D004103 ORTHO05D005242 4.7e-12 75.1 109 32.1
Solyc07g065550.3 Solanum lycopersicum HOM05D004103 ORTHO05D005242 4.7e-12 75.1 87 34.5
EL10Ac4g07564 Beta vulgaris HOM05D004103 ORTHO05D005242 6.1e-12 74.7 85 37.6
Duzib170G0622 Durio zibethinus HOM05D004103 ORTHO05D005242 8.0e-12 74.3 118 33.1
Nitab4.5_0002736g0050 Nicotiana tabacum HOM05D004103 ORTHO05D005242 8.0e-12 74.3 87 37.9
Psat5g167680 Pisum sativum HOM05D004103 ORTHO05D005242 8.0e-12 74.3 87 35.6
Hund06463 Selenicereus undatus HOM05D004103 ORTHO05D005242 8.0e-12 74.3 85 40.0
arahy.Tifrunner.gnm1.ann1.PC7QSD Arachis hypogaea HOM05D004103 ORTHO05D005242 1.0e-11 73.9 121 31.4
arahy.Tifrunner.gnm1.ann1.V7V5NB Arachis hypogaea HOM05D004103 ORTHO05D005242 1.0e-11 73.9 121 31.4
Sc03g0011390 Simmondsia chinensis HOM05D004103 ORTHO05D005242 1.0e-11 73.9 85 41.2
Sopen07g033750 Solanum pennellii HOM05D004103 ORTHO05D005242 1.0e-11 73.9 87 34.5
AUR62036459 Chenopodium quinoa HOM05D004103 ORTHO05D005242 1.4e-11 73.6 85 36.5
Gohir.A13G132700 Gossypium hirsutum HOM05D004103 ORTHO05D005242 1.4e-11 73.6 92 38.0
Manes.03G141400 Manihot esculenta HOM05D004103 ORTHO05D005242 1.4e-11 73.6 81 40.7
Nitab4.5_0009777g0010 Nicotiana tabacum HOM05D004103 ORTHO05D005242 1.4e-11 73.6 87 36.8
Os04g0271000 Oryza sativa ssp. japonica HOM05D004103 ORTHO05D005242 1.4e-11 73.6 94 42.6
SHI10165 Sapria himalayana HOM05D004103 ORTHO05D005242 1.4e-11 73.6 91 41.8
Ciclev10017468m.g Citrus clementina HOM05D004103 ORTHO05D005242 2.3e-11 72.8 92 41.3
Gorai.013G152600 Gossypium raimondii HOM05D004103 ORTHO05D005242 2.3e-11 72.8 92 38.0
CAN.G623.3 Capsicum annuum HOM05D004103 ORTHO05D005242 3.0e-11 72.4 87 36.8
MSTRG.15796 Avicennia marina HOM05D004103 ORTHO05D005242 4.0e-11 72.0 87 34.5
AUR62017106 Chenopodium quinoa HOM05D004103 ORTHO05D005242 4.0e-11 72.0 85 36.5
TWI38G1679 Tripterygium wilfordii HOM05D004103 ORTHO05D005242 4.0e-11 72.0 81 38.3
Zm00001eb425070 Zea mays HOM05D004103 ORTHO05D005242 4.0e-11 72.0 87 39.1
Aa31LG3G11690 Aethionema arabicum HOM05D004103 ORTHO05D005242 5.2e-11 71.6 103 34.0
AL77U10010 Arabidopsis lyrata HOM05D004103 ORTHO05D005242 6.8e-11 71.2 129 31.8
HPP92_018200 Vanilla planifolia HOM05D004103 ORTHO05D005242 6.8e-11 71.2 88 39.8
AT5G55760 Arabidopsis thaliana HOM05D004103 ORTHO05D005242 8.8e-11 70.9 104 32.7
SEGI_18003 Sequoiadendron giganteum HOM05D004103 ORTHO05D005242 8.8e-11 70.9 89 36.0
THA.LOC104811666 Tarenaya hassleriana HOM05D004103 ORTHO05D005242 1.5e-10 70.1 122 30.3
AL8G31340 Arabidopsis lyrata HOM05D004103 ORTHO05D005242 2.0e-10 69.7 129 31.0
CSS0037338 Camellia sinensis var. sinensis HOM05D004103 ORTHO05D005242 2.6e-10 69.3 143 29.4
Carub.0008s1614 Capsella rubella HOM05D004103 ORTHO05D005242 2.6e-10 69.3 105 32.4
Lj6g0008173 Lotus japonicus HOM05D004103 ORTHO05D005242 2.6e-10 69.3 82 37.8
unitig_747.g21638 Utricularia gibba HOM05D004103 ORTHO05D005242 2.6e-10 69.3 94 34.0
Sp6g17670 Schrenkiella parvula HOM05D004103 ORTHO05D005242 3.4e-10 68.9 105 31.4
BolC3t14049H Brassica oleracea HOM05D004103 ORTHO05D005242 1.3e-09 67.0 105 30.5
BraA03t10686Z Brassica rapa HOM05D004103 ORTHO05D005242 1.3e-09 67.0 105 30.5
VMungo0540G0291 Vigna mungo HOM05D004103 ORTHO05D005242 1.3e-09 67.0 135 29.6
BcaB01g04374 Brassica carinata HOM05D004103 ORTHO05D005242 2.2e-09 66.2 132 27.3
BcaC01g06391 Brassica carinata HOM05D004103 ORTHO05D005242 2.8e-09 65.9 105 29.5
A03p13830 Brassica napus HOM05D004103 ORTHO05D005242 2.8e-09 65.9 105 30.5
C03p16270 Brassica napus HOM05D004103 ORTHO05D005242 2.8e-09 65.9 105 29.5
Actinidia30403 Actinidia chinensis HOM05D004103 ORTHO05D005242 1.0e-06 57.4 110 29.1


User provided reference genes

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