Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036701.1 Olea europaea HOM05D006851 ORTHO05D008844 1.2e-268 929.5 523 100.0
Oeu020927.1 Olea europaea HOM05D009485 ORTHO05D006259 4.6e-68 263.1 296 64.5
Oeu020925.1 Olea europaea HOM05D006851 ORTHO05D008844 7.7e-63 245.7 204 66.7
Migut.M00503 Erythranthe guttata HOM05D009485 ORTHO05D006259 1.4e-51 208.4 296 48.3
Migut.M00236 Erythranthe guttata HOM05D006851 ORTHO05D008844 8.8e-43 179.1 200 51.0
MSTRG.6776 Avicennia marina HOM05D006851 ORTHO05D008844 4.4e-42 176.8 229 45.9
PGSC0003DMG400017313 Solanum tuberosum HOM05D006851 ORTHO05D008844 7.4e-42 176.0 197 51.8
CAN.G1360.8 Capsicum annuum HOM05D006851 ORTHO05D008844 8.2e-41 172.6 197 50.8
Sopen07g026880 Solanum pennellii HOM05D006851 ORTHO05D008844 1.4e-40 171.8 196 50.0
Peaxi162Scf00469g00629 Petunia axillaris HOM05D006851 ORTHO05D008844 1.8e-40 171.4 202 50.0
Solyc07g055340.3 Solanum lycopersicum HOM05D006851 ORTHO05D008844 1.8e-40 171.4 197 51.3
Dinv00450 Davidia involucrata HOM05D006851 ORTHO05D008844 3.1e-40 170.6 220 48.2
Dinv06196 Davidia involucrata HOM05D006851 ORTHO05D008844 7.0e-40 169.5 221 48.0
Cpa.g.sc483.1 Carica papaya HOM05D006851 ORTHO05D008844 3.5e-39 167.2 205 49.3
MSTRG.6747 Avicennia marina HOM05D009485 ORTHO05D006259 5.9e-39 166.4 289 44.6
Nitab4.5_0000249g0050 Nicotiana tabacum HOM05D006851 ORTHO05D008844 3.8e-38 163.7 201 46.3
Prupe.3G112500 Prunus persica HOM05D006851 ORTHO05D008844 8.5e-38 162.5 199 47.2
MD17G1263400 Malus domestica HOM05D006851 ORTHO05D008844 1.5e-37 161.8 204 46.6
Actinidia24403 Actinidia chinensis HOM05D006851 ORTHO05D008844 4.2e-37 160.2 212 45.3
Nitab4.5_0005922g0060 Nicotiana tabacum HOM05D006851 ORTHO05D008844 1.2e-36 158.7 201 45.3
AL4G41380 Arabidopsis lyrata HOM05D006851 ORTHO05D008844 6.1e-36 156.4 204 44.1
CiPaw.04G128500 Carya illinoinensis HOM05D006851 ORTHO05D008844 8.0e-36 156.0 208 45.7
Cc05_g08670 Coffea canephora HOM05D006851 ORTHO05D008844 8.0e-36 156.0 230 44.8
Gorai.008G099400 Gossypium raimondii HOM05D006851 ORTHO05D008844 8.0e-36 156.0 234 42.7
SalBow7G2485 Salvia bowleyana HOM05D006851 ORTHO05D008844 8.0e-36 156.0 185 49.7
Gohir.A12G091300 Gossypium hirsutum HOM05D006851 ORTHO05D008844 1.0e-35 155.6 196 45.9
COL.COLO4_33621 Corchorus olitorius HOM05D006851 ORTHO05D008844 1.4e-35 155.2 204 45.6
CSS0045809 Camellia sinensis var. sinensis HOM05D006851 ORTHO05D008844 2.3e-35 154.5 137 59.9
SGA_v2.0_scaffold9G04858 Striga asiatica HOM05D006851 ORTHO05D008844 4.0e-35 153.7 234 39.7
FAN14G0067 Fragaria x ananassa HOM05D006851 ORTHO05D008844 5.2e-35 153.3 216 44.9
Gohir.D12G091800 Gossypium hirsutum HOM05D006851 ORTHO05D008844 8.8e-35 152.5 234 42.3
HanXRQChr14g0455141 Helianthus annuus HOM05D006851 ORTHO05D008844 8.8e-35 152.5 197 46.7
Nn3g21095 Nelumbo nucifera HOM05D006851 ORTHO05D008844 8.8e-35 152.5 189 50.3
PGR142G1684 Punica granatum HOM05D006851 ORTHO05D008844 8.8e-35 152.5 223 44.4
FvH4_6g27820 Fragaria vesca HOM05D006851 ORTHO05D008844 1.2e-34 152.1 216 44.9
RcHm_v2.0_Chr2g0131101 Rosa chinensis HOM05D006851 ORTHO05D008844 2.0e-34 151.4 221 43.4
Atru.chr6.2752 Acer truncatum HOM05D006851 ORTHO05D008844 2.6e-34 151.0 200 46.5
CARHR137850 Cardamine hirsuta HOM05D006851 ORTHO05D008844 1.7e-33 148.3 204 42.6
Thhalv10017191m.g Eutrema salsugineum HOM05D006851 ORTHO05D008844 1.7e-33 148.3 207 41.5
Lsat_1_v5_gn_4_64780 Lactuca sativa HOM05D006851 ORTHO05D008844 2.2e-33 147.9 195 46.7
unitig_747.g21610 Utricularia gibba HOM05D009485 ORTHO05D006259 2.2e-33 147.9 286 39.2
MD09G1234300 Malus domestica HOM05D006851 ORTHO05D008844 2.8e-33 147.5 207 44.9
TWI59G1351 Tripterygium wilfordii HOM05D006851 ORTHO05D008844 2.8e-33 147.5 232 42.2
GSVIVG01020766001 Vitis vinifera HOM05D006851 ORTHO05D008844 4.8e-33 146.7 227 39.6
AT2G42770 Arabidopsis thaliana HOM05D006851 ORTHO05D008844 8.3e-33 146.0 204 42.2
Phvul.011G124700 Phaseolus vulgaris HOM05D006851 ORTHO05D008844 8.3e-33 146.0 193 46.6
QL08p039990 Quercus lobata HOM05D006851 ORTHO05D008844 1.1e-32 145.6 196 44.4
vmacro12402 Vaccinium macrocarpon HOM05D006851 ORTHO05D008844 1.8e-32 144.8 202 45.0
TPR.G9347 Trifolium pratense HOM05D006851 ORTHO05D008844 2.4e-32 144.4 197 47.2
FAN09G4077 Fragaria x ananassa HOM05D006851 ORTHO05D008844 3.1e-32 144.1 218 44.0
Ciclev10016542m.g Citrus clementina HOM05D006851 ORTHO05D008844 4.1e-32 143.7 205 45.4
THA.LOC104803044 Tarenaya hassleriana HOM05D006851 ORTHO05D008844 5.3e-32 143.3 210 41.9
VMungo1127G1292 Vigna mungo HOM05D006851 ORTHO05D008844 7.0e-32 142.9 189 47.1
BraA04t18692Z Brassica rapa HOM05D006851 ORTHO05D008844 1.2e-31 142.1 203 39.4
Hma1.2p1_0178F.1_g078450 Hydrangea macrophylla HOM05D006851 ORTHO05D008844 1.2e-31 142.1 178 47.2
Sed0012320 Sechium edule HOM05D006851 ORTHO05D008844 1.2e-31 142.1 258 37.6
BcaC02g07219 Brassica carinata HOM05D000115 ORTHO05D005317 1.6e-31 141.7 203 39.4
C04p69910 Brassica napus HOM05D006851 ORTHO05D008844 1.6e-31 141.7 203 39.4
BolC4t28490H Brassica oleracea HOM05D006851 ORTHO05D008844 1.6e-31 141.7 203 39.4
Haze_13231 Corylus avellana HOM05D006851 ORTHO05D008844 1.6e-31 141.7 260 38.5
TAR627G1017 Trochodendron aralioides HOM05D006851 ORTHO05D008844 1.6e-31 141.7 193 45.6
A04p32390 Brassica napus HOM05D006851 ORTHO05D008844 2.0e-31 141.4 203 39.4
CANSAT64G1521 Cannabis sativa HOM05D006851 ORTHO05D008844 2.0e-31 141.4 208 43.8
ClCG09G020830 Citrullus lanatus HOM05D006851 ORTHO05D008844 3.5e-31 140.6 208 40.9
Lj1A675G56 Lonicera japonica HOM05D006851 ORTHO05D008844 5.9e-31 139.8 278 37.1
Peaxi162Scf00035g00291 Petunia axillaris HOM05D009485 ORTHO05D006259 7.7e-31 139.4 292 41.4
Carub.0004s2521 Capsella rubella HOM05D006851 ORTHO05D008844 1.0e-30 139.0 204 40.7
Manes.02G088700 Manihot esculenta HOM05D006851 ORTHO05D008844 1.0e-30 139.0 210 41.9
Cfa014654 Carpinus fangiana HOM05D006851 ORTHO05D008844 1.3e-30 138.7 201 44.8
Psat7g167960 Pisum sativum HOM05D006851 ORTHO05D008844 1.3e-30 138.7 188 45.2
Sabra10G0010500 Salix brachista HOM05D006851 ORTHO05D008844 1.7e-30 138.3 218 39.9
Medtr4g078760 Medicago truncatula HOM05D006851 ORTHO05D008844 2.2e-30 137.9 179 46.4
PSO170G1219 Papaver somniferum HOM05D006851 ORTHO05D008844 2.2e-30 137.9 197 43.7
MELO3C014448.2 Cucumis melo HOM05D006851 ORTHO05D008844 2.9e-30 137.5 207 41.5
Glyma.06G289700 Glycine max HOM05D006851 ORTHO05D008844 2.9e-30 137.5 157 49.0
Sopen10g003690 Solanum pennellii HOM05D009485 ORTHO05D006259 3.8e-30 137.1 292 38.0
EL10Ac9g20993 Beta vulgaris HOM05D006851 ORTHO05D008844 5.0e-30 136.7 200 42.5
Aqoxy4G00244 Aquilegia oxysepala HOM05D006851 ORTHO05D008844 1.1e-29 135.6 195 41.5
Ca_18924_v3 Cicer arietinum L. HOM05D006851 ORTHO05D008844 1.1e-29 135.6 177 48.0
Sc21g0003000 Simmondsia chinensis HOM05D006851 ORTHO05D008844 1.1e-29 135.6 237 38.8
ECA233G5608 Erigeron canadensis HOM05D006851 ORTHO05D008844 2.5e-29 134.4 195 44.6
Duzib187G0166 Durio zibethinus HOM05D006851 ORTHO05D008844 3.2e-29 134.0 190 43.7
Aa31LG1G24530 Aethionema arabicum HOM05D006851 ORTHO05D008844 4.2e-29 133.7 197 42.6
Sp4g24890 Schrenkiella parvula HOM05D006851 ORTHO05D008844 4.2e-29 133.7 191 40.8
Lj3g0025564 Lotus japonicus HOM05D006851 ORTHO05D008844 5.5e-29 133.3 159 48.4
CsaV3_6G037870 Cucumis sativus L. HOM05D006851 ORTHO05D008844 7.2e-29 132.9 198 40.4
Lalb_Chr03g0029611 Lupinus albus HOM05D006851 ORTHO05D008844 7.2e-29 132.9 200 42.5
PSO782G5210 Papaver somniferum HOM05D006851 ORTHO05D008844 9.4e-29 132.5 197 42.6
Potri.010G032900 Populus trichocarpa HOM05D006851 ORTHO05D008844 1.6e-28 131.7 157 47.1
unitig_62.g23129 Utricularia gibba HOM05D006851 ORTHO05D008844 1.6e-28 131.7 195 43.1
arahy.Tifrunner.gnm1.ann1.WV2S1U Arachis hypogaea HOM05D006851 ORTHO05D008844 1.4e-27 128.6 189 41.3
ATR0012G031 Amborella trichopoda HOM05D006851 ORTHO05D008844 2.0e-26 124.8 196 41.3
Os01g0730800 Oryza sativa ssp. japonica HOM05D006851 ORTHO05D008844 1.7e-25 121.7 147 49.0
Zm00001eb361970 Zea mays HOM05D006851 ORTHO05D008844 2.2e-25 121.3 154 46.8
Peaxi162Scf00111g00008 Petunia axillaris HOM05D009485 ORTHO05D006259 8.3e-25 119.4 288 43.8
HPP92_011489 Vanilla planifolia HOM05D006851 ORTHO05D008844 1.1e-24 119.0 200 41.5
AUR62024041 Chenopodium quinoa HOM05D006851 ORTHO05D008844 2.0e-23 114.8 183 42.1
Eucgr.K01171 Eucalyptus grandis HOM05D006851 ORTHO05D008844 2.0e-23 114.8 74 68.9
SEGI_02260 Sequoiadendron giganteum HOM05D006851 ORTHO05D008844 2.0e-23 114.8 195 40.5
Thecc.01G154700 Theobroma cacao HOM05D006851 ORTHO05D008844 2.7e-23 114.4 82 62.2
Nitab4.5_0002027g0170 Nicotiana tabacum HOM05D009485 ORTHO05D006259 5.9e-23 113.2 291 36.8
SGA_v2.0_scaffold130G34364 Striga asiatica HOM05D009485 ORTHO05D006259 5.9e-23 113.2 291 39.2
COL.COLO4_34178 Corchorus olitorius HOM05D006851 ORTHO05D008844 7.7e-23 112.8 96 58.3
Nitab4.5_0001402g0020 Nicotiana tabacum HOM05D009485 ORTHO05D006259 5.0e-22 110.2 218 41.3
FAN02G4364 Fragaria x ananassa HOM05D006851 ORTHO05D008844 8.6e-22 109.4 74 62.2
SMO351G0432 Selaginella moellendorffii HOM05D006851 ORTHO05D008844 1.1e-21 109.0 178 39.3
PGSC0003DMG400021282 Solanum tuberosum HOM05D009485 ORTHO05D006259 1.5e-21 108.6 293 37.9
Glyma.12G117300 Glycine max HOM05D006851 ORTHO05D008844 1.9e-21 108.2 82 59.8
AagrBONN_evm.TU.Sc2ySwM_228.5720 Anthoceros agrestis HOM05D006851 ORTHO05D008844 1.6e-20 105.1 163 38.7
Thecc.08G139600 Theobroma cacao HOM05D006851 ORTHO05D008844 1.6e-20 105.1 82 61.0
Actinidia32516 Actinidia chinensis HOM05D006785 ORTHO05D006259 1.8e-19 101.7 359 30.4
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 1.8e-19 101.7 349 33.2
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 1.8e-19 101.7 349 33.2
Dinv07090 Davidia involucrata HOM05D006785 ORTHO05D006259 4.0e-19 100.5 355 31.0
Ca_29529_v3 Cicer arietinum L. HOM05D006851 ORTHO05D008844 1.2e-18 99.0 64 68.8
Cc05_g09420 Coffea canephora HOM05D009485 ORTHO05D006259 1.2e-18 99.0 295 34.9
unitig_46.g18281 Utricularia gibba HOM05D009485 ORTHO05D006259 1.5e-18 98.6 192 40.6
Solyc10g007780.3 Solanum lycopersicum HOM05D009485 ORTHO05D006259 2.6e-18 97.8 234 37.2
CAN.G585.40 Capsicum annuum HOM05D009485 ORTHO05D006259 1.1e-16 92.4 297 38.7
SEGI_39598 Sequoiadendron giganteum HOM05D006851 ORTHO05D008844 4.1e-16 90.5 196 31.6
Pp3c20_12770 Physcomitrium patens HOM05D006851 ORTHO05D008844 7.0e-16 89.7 160 35.0
Nitab4.5_0001675g0090 Nicotiana tabacum HOM05D009485 ORTHO05D006259 1.6e-15 88.6 293 40.6
CBR_g30010 Chara braunii HOM05D006851 ORTHO05D008844 1.3e-14 85.5 142 35.9
vmacro12460 Vaccinium macrocarpon HOM05D006785 ORTHO05D006259 5.0e-14 83.6 276 30.1
Mapoly0112s0035 Marchantia polymorpha HOM05D006851 ORTHO05D008844 1.5e-13 82.0 153 35.3
DCAR_013314 Daucus carota HOM05D006785 ORTHO05D006259 4.3e-13 80.5 189 32.8
Rhsim06G0116700 Rhododendron simsii HOM05D006785 ORTHO05D006259 1.2e-12 79.0 207 32.4
CAN.G1191.3 Capsicum annuum HOM05D009485 ORTHO05D006259 2.1e-12 78.2 179 37.4
Solyc07g056370.3 Solanum lycopersicum HOM05D009485 ORTHO05D006259 2.1e-12 78.2 119 46.2
Sopen07g029750 Solanum pennellii HOM05D009485 ORTHO05D006259 2.8e-12 77.8 150 40.7
ECA233G1175 Erigeron canadensis HOM05D009485 ORTHO05D006259 6.1e-12 76.6 205 34.1
Actinidia11204 Actinidia chinensis HOM05D006785 ORTHO05D006259 3.1e-11 74.3 191 30.4
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 8.9e-11 72.8 319 27.3
Thecc.01G161700 Theobroma cacao HOM05D006785 ORTHO05D006259 3.4e-10 70.9 115 37.4
HanXRQChr08g0227971 Helianthus annuus HOM05D009485 ORTHO05D006259 4.4e-10 70.5 160 35.0
Gorai.008G098200 Gossypium raimondii HOM05D006785 ORTHO05D006259 5.8e-10 70.1 266 30.5
Hma1.2p1_0960F.1_g241635 Hydrangea macrophylla HOM05D006785 ORTHO05D006259 7.5e-10 69.7 339 25.7
ClCG02G018390 Citrullus lanatus HOM05D006785 ORTHO05D006259 2.2e-09 68.2 327 28.7
Sed0020726 Sechium edule HOM05D006785 ORTHO05D006259 3.7e-09 67.4 219 31.1
Manes.01G127500 Manihot esculenta HOM05D006785 ORTHO05D006259 4.9e-09 67.0 332 31.0
Duzib264G0099 Durio zibethinus HOM05D006785 ORTHO05D006259 6.4e-09 66.6 115 36.5
Hma1.2p1_0178F.1_g078440 Hydrangea macrophylla HOM05D006851 ORTHO05D008844 6.4e-09 66.6 145 35.2
CsaV3_6G015830 Cucumis sativus L. HOM05D006785 ORTHO05D006259 8.3e-09 66.2 304 29.9
Cfa021376 Carpinus fangiana HOM05D006785 ORTHO05D006259 1.4e-08 65.5 323 33.4
Gohir.D12G068400 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.4e-08 65.5 266 34.2
Carub.0001s0590 Capsella rubella HOM05D006785 ORTHO05D006259 2.4e-08 64.7 330 27.6
MBI10_g42732_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 4.1e-08 63.9 132 38.6
PSO541G2000 Papaver somniferum HOM05D006785 ORTHO05D006259 4.1e-08 63.9 133 39.8
PSO675G6378 Papaver somniferum HOM05D006785 ORTHO05D006259 5.4e-08 63.5 133 39.8
TAR627G0640 Trochodendron aralioides HOM05D006785 ORTHO05D006259 5.4e-08 63.5 241 28.6
AT1G06530 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 9.2e-08 62.8 330 28.8
Nitab4.5_0003934g0050 Nicotiana tabacum HOM05D009485 ORTHO05D006259 9.2e-08 62.8 293 39.6
QL08p044083 Quercus lobata HOM05D006785 ORTHO05D006259 9.2e-08 62.8 339 28.0
CANSAT64G1891 Cannabis sativa HOM05D006785 ORTHO05D006259 2.0e-07 61.6 328 29.9
Eucgr.A01969 Eucalyptus grandis HOM05D006785 ORTHO05D006259 3.5e-07 60.8 122 34.4
Gohir.A12G079000 Gossypium hirsutum HOM05D006785 ORTHO05D006259 3.5e-07 60.8 288 33.0
MCO06G111 Micromonas commoda HOM05D006851 ORTHO05D008844 4.6e-07 60.5 91 39.6
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 6.0e-07 60.1 341 28.7
Lj1P620T12 Lonicera japonica HOM05D006785 ORTHO05D006259 7.8e-07 59.7 158 31.6
THA.LOC104800823 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 1.0e-06 59.3 206 27.7
Nn3g20927 Nelumbo nucifera HOM05D006785 ORTHO05D006259 1.3e-06 58.9 246 27.2
Thecc.01G154800 Theobroma cacao HOM05D006851 ORTHO05D008844 1.7e-06 58.5 86 45.3
ATR0568G074 Amborella trichopoda HOM05D006785 ORTHO05D006259 2.3e-06 58.2 257 28.4
Oeu043747.1 Olea europaea HOM05D009485 ORTHO05D006259 6.6e-06 56.6 50 64.0
Phvul.008G191300 Phaseolus vulgaris HOM05D006785 ORTHO05D006259 6.6e-06 56.6 205 31.2
MELO3C019688.2 Cucumis melo HOM05D006785 ORTHO05D006259 8.6e-06 56.2 320 33.1


User provided reference genes

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