Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 1.2e-85 320.9 331 100.0
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 1.6e-58 230.7 334 83.5
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 7.5e-56 221.9 329 73.9
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 1.1e-54 218.0 318 71.4
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 1.1e-54 218.0 325 85.5
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 1.4e-54 217.6 324 83.6
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 1.1e-51 208.0 328 81.1
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 4.3e-51 206.1 324 79.9
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 4.3e-51 206.1 327 83.8
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 4.3e-51 206.1 326 83.1
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 5.6e-51 205.7 329 81.8
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 1.2e-50 204.5 331 81.6
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 1.6e-50 204.1 323 83.0
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.6e-50 204.1 324 79.0
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 3.6e-50 203.0 329 82.7
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 4.7e-50 202.6 323 84.2
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 1.4e-49 201.1 330 81.8
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 2.3e-49 200.3 326 82.2
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 2.3e-49 200.3 325 77.5
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 3.0e-49 199.9 315 85.7
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 3.0e-49 199.9 323 83.6
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 4.0e-49 199.5 326 80.7
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 6.8e-49 198.7 328 81.7
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 1.5e-48 197.6 328 79.3
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 1.5e-48 197.6 323 78.3
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 2.0e-48 197.2 330 81.5
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 2.0e-48 197.2 316 84.5
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 2.6e-48 196.8 330 81.5
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 4.4e-48 196.1 326 80.1
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 4.4e-48 196.1 325 80.0
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 4.4e-48 196.1 325 80.0
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 7.5e-48 195.3 328 73.8
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 9.8e-48 194.9 328 74.1
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 9.8e-48 194.9 327 82.0
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 3.7e-47 193.0 328 76.2
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 1.1e-46 191.4 320 79.4
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 1.2e-45 188.0 327 79.2
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 1.2e-45 188.0 324 80.6
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 1.0e-44 184.9 328 79.6
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 1.7e-44 184.1 321 79.1
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 2.3e-44 183.7 326 76.1
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 3.0e-44 183.3 328 79.3
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 5.0e-44 182.6 328 79.0
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 1.5e-43 181.0 324 80.9
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 1.5e-43 181.0 328 74.7
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 2.5e-43 180.3 329 76.0
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 2.5e-43 180.3 319 78.4
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 9.5e-43 178.3 324 76.9
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 1.2e-42 177.9 329 79.6
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 1.2e-42 177.9 332 48.5
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 1.6e-42 177.6 329 76.0
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 3.6e-42 176.4 319 78.4
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 4.7e-42 176.0 322 77.3
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 1.4e-41 174.5 321 72.6
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 1.8e-41 174.1 318 80.2
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 3.1e-41 173.3 322 78.9
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 3.1e-41 173.3 322 78.9
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 3.1e-41 173.3 317 79.2
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 5.2e-41 172.6 326 78.2
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 1.2e-40 171.4 329 77.2
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 1.2e-40 171.4 329 77.2
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 1.2e-40 171.4 321 77.9
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 3.4e-40 169.9 322 77.0
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 4.4e-40 169.5 363 66.9
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 3.7e-39 166.4 311 82.3
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 8.3e-39 165.2 322 77.6
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 1.1e-38 164.9 319 76.2
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 1.1e-38 164.9 328 79.3
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 1.9e-38 164.1 328 79.3
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 3.2e-38 163.3 329 69.0
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 7.0e-38 162.2 326 77.3
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 7.0e-38 162.2 322 77.0
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 1.6e-37 161.0 328 75.6
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 1.6e-37 161.0 324 79.3
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 6.0e-37 159.1 319 75.5
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 6.0e-37 159.1 325 75.1
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 7.8e-37 158.7 319 77.7
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 3.0e-36 156.8 319 74.9
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 1.5e-35 154.5 319 74.9
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 1.9e-35 154.1 315 75.9
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 3.1e-33 146.7 297 81.8
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 1.5e-32 144.4 322 67.1
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 2.6e-32 143.7 327 64.2
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 1.3e-31 141.4 325 63.1
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 1.3e-31 141.4 322 71.4
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 1.9e-30 137.5 327 68.8
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 2.4e-30 137.1 327 62.7
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 4.1e-30 136.3 327 61.5
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 2.7e-29 133.7 322 63.4
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 2.3e-28 130.6 79 78.5
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 5.1e-28 129.4 279 81.0
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 5.1e-28 129.4 324 71.3
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 8.6e-28 128.6 326 61.3
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 1.6e-26 124.4 295 77.6
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 3.1e-25 120.2 75 74.7
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 4.0e-25 119.8 325 66.5
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 5.2e-25 119.4 325 66.2
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 5.2e-25 119.4 325 66.2
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 6.8e-25 119.0 322 51.6
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 8.9e-25 118.6 324 69.8
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 3.4e-24 116.7 87 62.1
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 3.4e-24 116.7 325 65.8
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 2.9e-23 113.6 75 60.0
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 8.4e-23 112.1 285 40.4
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 3.5e-21 106.7 60 80.0
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 6.0e-21 105.9 63 74.6
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 7.8e-21 105.5 317 42.9
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 1.1e-19 101.7 323 56.3
TAR381G1325 Trochodendron aralioides HOM05D006835 ORTHO05D008587 1.8e-17 94.4 57 73.7
SEGI_34779 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 3.4e-16 90.1 63 63.5
HPP92_022026 Vanilla planifolia HOM05D006835 ORTHO05D008587 1.2e-13 81.6 58 63.8
Actinidia20590 Actinidia chinensis HOM05D006835 ORTHO05D008587 6.2e-10 69.3 44 72.7
Mapoly0015s0200 Marchantia polymorpha HOM05D006835 ORTHO05D008587 1.8e-09 67.8 93 39.8
SEGI_18890 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 5.3e-09 66.2 42 66.7
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 5.8e-08 62.8 74 41.9
vmacro17159 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 4.9e-07 59.7 42 64.3
ECA247G3292 Erigeron canadensis HOM05D002901 ORTHO05D003183 4.2e-06 56.6 55 41.8
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 4.2e-06 56.6 65 41.5
Hma1.2p1_2405F.1_g321440 Hydrangea macrophylla HOM05D002901 ORTHO05D003183 7.1e-06 55.8 56 39.3
Lsat_1_v5_gn_9_1861 Lactuca sativa HOM05D002901 ORTHO05D003183 9.3e-06 55.5 55 40.0


User provided reference genes

Program Settings