Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033990.1 Olea europaea HOM05D003077 ORTHO05D003354 3.9e-83 311.6 178 100.0
Oeu040401.1 Olea europaea HOM05D003077 ORTHO05D003354 2.1e-65 252.7 175 82.9
SGA_v2.0_scaffold24G10423 Striga asiatica HOM05D003077 ORTHO05D003354 3.2e-45 185.7 181 66.3
MSTRG.1414 Avicennia marina HOM05D003077 ORTHO05D003354 1.9e-42 176.4 181 59.7
Migut.C01065 Erythranthe guttata HOM05D003077 ORTHO05D003354 7.4e-42 174.5 177 64.4
SalBow7G2753 Salvia bowleyana HOM05D003077 ORTHO05D003354 1.3e-41 173.7 180 62.2
Migut.N03265 Erythranthe guttata HOM05D003077 ORTHO05D003354 4.8e-41 171.8 179 57.0
SalBow7G0800 Salvia bowleyana HOM05D003077 ORTHO05D003354 6.2e-41 171.4 180 61.7
MSTRG.25361 Avicennia marina HOM05D003077 ORTHO05D003354 1.8e-40 169.9 175 56.0
unitig_0.g901 Utricularia gibba HOM05D003077 ORTHO05D003354 2.6e-39 166.0 181 57.5
SGA_v2.0_scaffold25G11135 Striga asiatica HOM05D003077 ORTHO05D003354 1.3e-38 163.7 177 62.7
SalBow2G2699 Salvia bowleyana HOM05D003077 ORTHO05D003354 2.9e-38 162.5 179 57.5
SGA_v2.0_scaffold28G11976 Striga asiatica HOM05D003077 ORTHO05D003354 4.9e-38 161.8 182 54.4
unitig_61.g26062 Utricularia gibba HOM05D003077 ORTHO05D003354 5.5e-37 158.3 181 55.2
unitig_744.g24563 Utricularia gibba HOM05D005356 ORTHO05D006596 2.4e-32 142.9 166 54.2
Nitab4.5_0003863g0040 Nicotiana tabacum HOM05D003077 ORTHO05D003354 2.0e-31 139.8 181 49.2
Nitab4.5_0001168g0100 Nicotiana tabacum HOM05D003077 ORTHO05D003354 5.9e-31 138.3 177 48.6
Solyc11g005130.2 Solanum lycopersicum HOM05D003077 ORTHO05D003354 1.0e-30 137.5 177 50.8
Sopen11g001130 Solanum pennellii HOM05D003077 ORTHO05D003354 1.0e-30 137.5 177 50.8
Dinv14687 Davidia involucrata HOM05D003077 ORTHO05D003354 1.7e-30 136.7 175 53.1
Actinidia21280 Actinidia chinensis HOM05D003077 ORTHO05D003354 1.4e-29 133.7 177 49.7
SGA_v2.0_scaffold52G18922 Striga asiatica HOM05D003077 ORTHO05D003354 3.2e-29 132.5 176 56.8
Actinidia15214 Actinidia chinensis HOM05D003077 ORTHO05D003354 1.6e-28 130.2 177 50.8
DCAR_014371 Daucus carota HOM05D003077 ORTHO05D003354 2.1e-28 129.8 179 48.6
CAN.G716.6 Capsicum annuum HOM05D003077 ORTHO05D003354 4.6e-28 128.6 166 49.4
Ciclev10000343m.g Citrus clementina HOM05D003077 ORTHO05D003354 4.6e-28 128.6 175 49.1
Hma1.2p1_0014F.1_g010220 Hydrangea macrophylla HOM05D003077 ORTHO05D003354 1.3e-27 127.1 176 46.6
SGA_v2.0_scaffold81G26136 Striga asiatica HOM05D003077 ORTHO05D003354 1.8e-27 126.7 144 55.6
Sabra05G0138200 Salix brachista HOM05D003077 ORTHO05D003354 5.1e-27 125.2 178 48.3
DCAR_016656 Daucus carota HOM05D003077 ORTHO05D003354 6.7e-27 124.8 185 47.6
Lsat_1_v5_gn_6_110261 Lactuca sativa HOM05D003077 ORTHO05D003354 6.7e-27 124.8 183 49.2
Cfa018128 Carpinus fangiana HOM05D003077 ORTHO05D003354 1.1e-26 124.0 174 47.7
HanXRQChr05g0149791 Helianthus annuus HOM05D003077 ORTHO05D003354 1.1e-26 124.0 161 54.7
Atru.chr13.1565 Acer truncatum HOM05D003077 ORTHO05D003354 1.5e-26 123.6 174 48.3
Gohir.A02G071200 Gossypium hirsutum HOM05D003077 ORTHO05D003354 1.5e-26 123.6 177 45.8
Prupe.1G489600 Prunus persica HOM05D003077 ORTHO05D003354 1.5e-26 123.6 173 46.8
MD08G1159200 Malus domestica HOM05D003077 ORTHO05D003354 1.9e-26 123.2 166 46.4
Manes.02G168300 Manihot esculenta HOM05D003077 ORTHO05D003354 1.9e-26 123.2 174 48.9
Rhsim11G0071700 Rhododendron simsii HOM05D003077 ORTHO05D003354 1.9e-26 123.2 174 48.3
Gohir.D02G078300 Gossypium hirsutum HOM05D003077 ORTHO05D003354 3.3e-26 122.5 178 45.5
Gorai.005G087800 Gossypium raimondii HOM05D003077 ORTHO05D003354 3.3e-26 122.5 178 45.5
Potri.005G182300 Populus trichocarpa HOM05D003077 ORTHO05D003354 3.3e-26 122.5 180 46.1
Duzib093G0755 Durio zibethinus HOM05D003077 ORTHO05D003354 4.3e-26 122.1 157 48.4
Sabra02G0061700 Salix brachista HOM05D003077 ORTHO05D003354 4.3e-26 122.1 165 46.1
VMungo0647G0503 Vigna mungo HOM05D003077 ORTHO05D003354 4.3e-26 122.1 177 45.8
FvH4_2g27830 Fragaria vesca HOM05D003077 ORTHO05D003354 5.7e-26 121.7 167 44.3
FAN24G2697 Fragaria x ananassa HOM05D003077 ORTHO05D003354 5.7e-26 121.7 167 44.3
CiPaw.16G022800 Carya illinoinensis HOM05D003077 ORTHO05D003354 7.4e-26 121.3 176 49.4
Phvul.001G070500 Phaseolus vulgaris HOM05D003077 ORTHO05D003354 7.4e-26 121.3 174 47.1
Peaxi162Scf00066g00134 Petunia axillaris HOM05D003077 ORTHO05D003354 9.7e-26 120.9 191 44.5
Gohir.A02G110500 Gossypium hirsutum HOM05D003077 ORTHO05D003354 1.7e-25 120.2 178 47.8
Medtr3g088585 Medicago truncatula HOM05D003077 ORTHO05D003354 2.2e-25 119.8 163 47.2
TAR625G0294 Trochodendron aralioides HOM05D003077 ORTHO05D003354 2.8e-25 119.4 164 48.2
GSVIVG01008808001 Vitis vinifera HOM05D003077 ORTHO05D003354 2.8e-25 119.4 154 50.0
Glyma.14G154900 Glycine max HOM05D003077 ORTHO05D003354 3.7e-25 119.0 173 46.8
Sc15g0007510 Simmondsia chinensis HOM05D003077 ORTHO05D003354 3.7e-25 119.0 180 43.9
FAN27G2585 Fragaria x ananassa HOM05D003077 ORTHO05D003354 4.8e-25 118.6 169 43.8
Medtr1g029680 Medicago truncatula HOM05D003077 ORTHO05D003354 4.8e-25 118.6 167 47.9
Psat5g084800 Pisum sativum HOM05D003077 ORTHO05D003354 4.8e-25 118.6 162 48.1
Sed0016256 Sechium edule HOM05D003077 ORTHO05D003354 4.8e-25 118.6 182 46.2
FAN20G3132 Fragaria x ananassa HOM05D003077 ORTHO05D003354 6.3e-25 118.2 165 44.2
Gohir.D03G069004 Gossypium hirsutum HOM05D003077 ORTHO05D003354 6.3e-25 118.2 179 47.5
Gorai.013G107800 Gossypium raimondii HOM05D003077 ORTHO05D003354 6.3e-25 118.2 179 47.5
CsaV3_6G034070 Cucumis sativus L. HOM05D003077 ORTHO05D003354 8.2e-25 117.9 172 45.3
Manes.18G082300 Manihot esculenta HOM05D003077 ORTHO05D003354 8.2e-25 117.9 174 44.8
Potri.002G078800 Populus trichocarpa HOM05D003077 ORTHO05D003354 8.2e-25 117.9 179 45.8
Cpa.g.sc64.169 Carica papaya HOM05D003077 ORTHO05D003354 1.1e-24 117.5 175 46.9
TWI32G1117 Tripterygium wilfordii HOM05D003077 ORTHO05D003354 1.1e-24 117.5 175 47.4
ClCG08G006020 Citrullus lanatus HOM05D003077 ORTHO05D003354 1.4e-24 117.1 173 45.1
COL.COLO4_08846 Corchorus olitorius HOM05D003077 ORTHO05D003354 1.4e-24 117.1 152 48.7
FAN15G0848 Fragaria x ananassa HOM05D003077 ORTHO05D003354 1.4e-24 117.1 167 45.5
vmacro00865 Vaccinium macrocarpon HOM05D003077 ORTHO05D003354 1.4e-24 117.1 194 44.3
EL10Ac1g01345 Beta vulgaris HOM05D003077 ORTHO05D003354 2.4e-24 116.3 188 41.5
MELO3C010653.2 Cucumis melo HOM05D003077 ORTHO05D003354 2.4e-24 116.3 172 45.3
Phvul.009G129800 Phaseolus vulgaris HOM05D003077 ORTHO05D003354 2.4e-24 116.3 163 46.6
Thecc.08G132900 Theobroma cacao HOM05D003077 ORTHO05D003354 2.4e-24 116.3 154 46.1
CiPaw.15G031400 Carya illinoinensis HOM05D003077 ORTHO05D003354 3.1e-24 115.9 160 48.8
Glyma.06G117400 Glycine max HOM05D003077 ORTHO05D003354 4.1e-24 115.5 163 47.2
Ah.05g169130 Amaranthus hybridus HOM05D003077 ORTHO05D003354 5.3e-24 115.2 163 44.8
VMungo1309G2236 Vigna mungo HOM05D003077 ORTHO05D003354 5.3e-24 115.2 169 46.7
Glyma.04G245700 Glycine max HOM05D003077 ORTHO05D003354 6.9e-24 114.8 159 47.8
arahy.Tifrunner.gnm1.ann1.RUFP3A Arachis hypogaea HOM05D003077 ORTHO05D003354 9.1e-24 114.4 163 46.0
arahy.Tifrunner.gnm1.ann1.PT3H3P Arachis hypogaea HOM05D003077 ORTHO05D003354 1.2e-23 114.0 163 46.0
Sc02g0004730 Simmondsia chinensis HOM05D003077 ORTHO05D003354 1.2e-23 114.0 174 45.4
ECA246G2541 Erigeron canadensis HOM05D003077 ORTHO05D003354 1.5e-23 113.6 180 43.9
MBI03_g39653_MAGBIO Magnolia biondii HOM05D003077 ORTHO05D003354 1.5e-23 113.6 164 44.5
PGR042G0595 Punica granatum HOM05D003077 ORTHO05D003354 2.0e-23 113.2 177 45.2
Sp1g19140 Schrenkiella parvula HOM05D003077 ORTHO05D003354 2.0e-23 113.2 155 46.5
Lsat_1_v5_gn_1_7800 Lactuca sativa HOM05D003077 ORTHO05D003354 2.6e-23 112.8 176 47.7
Nn5g28434 Nelumbo nucifera HOM05D003077 ORTHO05D003354 2.6e-23 112.8 170 47.6
TPR.G28812 Trifolium pratense HOM05D003077 ORTHO05D003354 2.6e-23 112.8 162 46.9
TWI34G0175 Tripterygium wilfordii HOM05D003077 ORTHO05D003354 2.6e-23 112.8 175 46.3
Ca_16606_v3 Cicer arietinum L. HOM05D003077 ORTHO05D005230 3.4e-23 112.5 162 45.1
Glyma.13G032500 Glycine max HOM05D003077 ORTHO05D003354 3.4e-23 112.5 174 43.7
MBI06_g35211_MAGBIO Magnolia biondii HOM05D003077 ORTHO05D003354 3.4e-23 112.5 152 44.7
THA.LOC104812084 Tarenaya hassleriana HOM05D003077 ORTHO05D003354 4.5e-23 112.1 179 44.7
CANSAT25G3561 Cannabis sativa HOM05D003077 ORTHO05D003354 5.9e-23 111.7 155 49.0
Cc10_g12800 Coffea canephora HOM05D003077 ORTHO05D003354 5.9e-23 111.7 194 43.3
CDE02G1774 Ceratophyllum demersum HOM05D003077 ORTHO05D003354 1.0e-22 110.9 175 42.9
Ca_12646_v3 Cicer arietinum L. HOM05D003077 ORTHO05D003354 1.0e-22 110.9 167 44.9
Sp5g32490 Schrenkiella parvula HOM05D003077 ORTHO05D003354 1.0e-22 110.9 173 43.9
C06p51470 Brassica napus HOM05D003077 ORTHO05D003354 1.7e-22 110.2 172 41.9
BolC6t40165H Brassica oleracea HOM05D003077 ORTHO05D003354 1.7e-22 110.2 172 41.9
A07p42850 Brassica napus HOM05D003077 ORTHO05D003354 2.2e-22 109.8 172 41.9
BraA07t31806Z Brassica rapa HOM05D003077 ORTHO05D003354 2.9e-22 109.4 172 41.9
Carub.0001s2104 Capsella rubella HOM05D003077 ORTHO05D003354 2.9e-22 109.4 177 40.7
CSS0035070 Camellia sinensis var. sinensis HOM05D003077 ORTHO05D003354 3.8e-22 109.0 172 44.2
TAR628G1099 Trochodendron aralioides HOM05D003077 ORTHO05D003354 3.8e-22 109.0 153 49.0
CANSAT11G0740 Cannabis sativa HOM05D003077 ORTHO05D003354 5.0e-22 108.6 154 44.8
Lj1g0018738 Lotus japonicus HOM05D003077 ORTHO05D003354 5.0e-22 108.6 169 47.3
RcHm_v2.0_Chr6g0296701 Rosa chinensis HOM05D003077 ORTHO05D003354 5.0e-22 108.6 170 41.2
AT1G21610 Arabidopsis thaliana HOM05D003077 ORTHO05D003354 6.5e-22 108.2 154 44.2
Lalb_Chr10g0101491 Lupinus albus HOM05D003077 ORTHO05D003354 6.5e-22 108.2 165 44.8
Lalb_Chr11g0066171 Lupinus albus HOM05D003077 ORTHO05D003354 8.5e-22 107.8 154 49.4
PSO528G0274 Papaver somniferum HOM05D003077 ORTHO05D003354 8.5e-22 107.8 157 45.9
THA.LOC104813681 Tarenaya hassleriana HOM05D003077 ORTHO05D003354 8.5e-22 107.8 168 42.9
Thhalv10018217m.g Eutrema salsugineum HOM05D003077 ORTHO05D003354 1.9e-21 106.7 173 45.1
Aa31LG4G7340 Aethionema arabicum HOM05D003077 ORTHO05D003354 2.5e-21 106.3 173 44.5
Aa31LG7G5590 Aethionema arabicum HOM05D003077 ORTHO05D003354 2.5e-21 106.3 154 44.2
CARHR021970 Cardamine hirsuta HOM05D003077 ORTHO05D003354 2.5e-21 106.3 175 40.6
SHI09202 Sapria himalayana HOM05D003077 ORTHO05D003354 4.2e-21 105.5 169 43.2
VMungo1215G2387 Vigna mungo HOM05D003077 ORTHO05D003354 5.5e-21 105.1 154 46.8
AL1G34750 Arabidopsis lyrata HOM05D003077 ORTHO05D003354 9.4e-21 104.4 174 40.8
PSO170G0953 Papaver somniferum HOM05D003077 ORTHO05D003354 9.4e-21 104.4 157 45.2
Nn1g08962 Nelumbo nucifera HOM05D003077 ORTHO05D003354 1.2e-20 104.0 149 48.3
ATR0584G207 Amborella trichopoda HOM05D003077 ORTHO05D003354 2.1e-20 103.2 151 43.7
BcaC08g47619 Brassica carinata HOM05D003077 ORTHO05D003354 2.1e-20 103.2 167 41.3
Aqoxy5G02381 Aquilegia oxysepala HOM05D003077 ORTHO05D003354 3.6e-20 102.4 169 41.4
Lalb_Chr23g0271171 Lupinus albus HOM05D003077 ORTHO05D003354 6.1e-20 101.7 167 42.5
Psat6g040480 Pisum sativum HOM05D003077 ORTHO05D003354 7.9e-20 101.3 162 43.8
BcaB05g25039 Brassica carinata HOM05D003077 ORTHO05D003354 3.0e-19 99.4 175 40.6
Sed0001846 Sechium edule HOM05D003077 ORTHO05D003354 5.1e-19 98.6 182 48.4
Lj1g0006258 Lotus japonicus HOM05D003077 ORTHO05D003354 1.5e-18 97.1 154 44.2
BcaB02g07101 Brassica carinata HOM05D003077 ORTHO05D003354 2.0e-18 96.7 147 42.9
BcaC08g45481 Brassica carinata HOM05D003077 ORTHO05D003354 2.0e-18 96.7 147 42.9
A07p28050 Brassica napus HOM05D003077 ORTHO05D003354 2.6e-18 96.3 167 39.5
BolC6t38271H Brassica oleracea HOM05D003077 ORTHO05D003354 2.6e-18 96.3 167 39.5
BraA07t30449Z Brassica rapa HOM05D003077 ORTHO05D003354 2.6e-18 96.3 167 39.5
BcaC03g15730 Brassica carinata HOM05D003077 ORTHO05D003354 3.3e-18 95.9 172 41.3
C02p34450 Brassica napus HOM05D003077 ORTHO05D003354 3.3e-18 95.9 172 41.3
C06p31320 Brassica napus HOM05D003077 ORTHO05D003354 3.3e-18 95.9 172 40.1
BolC2t09477H Brassica oleracea HOM05D003077 ORTHO05D003354 3.3e-18 95.9 172 41.3
BraA02t07140Z Brassica rapa HOM05D003077 ORTHO05D003354 7.4e-18 94.7 170 41.8
A02p21210 Brassica napus HOM05D003077 ORTHO05D003354 9.7e-18 94.4 167 40.7
SEGI_13465 Sequoiadendron giganteum HOM05D003077 ORTHO05D003354 1.7e-17 93.6 151 43.0
Aqoxy2G02388 Aquilegia oxysepala HOM05D003077 ORTHO05D003354 2.2e-17 93.2 150 42.0
AL2G37510 Arabidopsis lyrata HOM05D003077 ORTHO05D003354 4.1e-16 89.0 170 40.6
AT1G77310 Arabidopsis thaliana HOM05D003077 ORTHO05D003354 4.1e-16 89.0 154 42.2
Zm00001eb145640 Zea mays HOM05D003077 ORTHO05D003354 4.1e-16 89.0 154 40.3
Mapoly0042s0059 Marchantia polymorpha HOM05D003077 ORTHO05D003354 5.3e-16 88.6 161 41.0
Carub.0002s2419 Capsella rubella HOM05D003077 ORTHO05D003354 9.1e-16 87.8 154 42.9
CSS0012408 Camellia sinensis var. sinensis HOM05D003077 ORTHO05D003354 2.6e-15 86.3 89 53.9
CSS0038864 Camellia sinensis var. sinensis HOM05D003077 ORTHO05D003354 2.6e-15 86.3 89 53.9
Pp3c3_8000 Physcomitrium patens HOM05D003077 ORTHO05D003354 3.4e-15 85.9 152 40.1
Pp3c13_4490 Physcomitrium patens HOM05D003077 ORTHO05D003354 4.5e-15 85.5 152 38.8
SMO116G0073 Selaginella moellendorffii HOM05D003077 ORTHO05D003354 2.9e-14 82.8 180 37.8
CSS0019818 Camellia sinensis var. sinensis HOM05D003077 ORTHO05D003354 1.4e-13 80.5 89 52.8
RcHm_v2.0_Chr6g0293421 Rosa chinensis HOM05D003077 ORTHO05D003354 1.9e-13 80.1 92 46.7
HanXRQChr16g0503811 Helianthus annuus HOM05D005364 ORTHO05D006554 2.5e-13 79.7 79 59.5
AUR62007718 Chenopodium quinoa HOM05D001245 ORTHO05D004475 4.2e-13 79.0 179 34.6
Potri.007G101201 Populus trichocarpa HOM05D003077 ORTHO05D003354 4.2e-13 79.0 177 37.9
TAR229G0004 Trochodendron aralioides HOM05D003077 ORTHO05D003354 1.2e-12 77.4 159 39.6
TPR.G30547 Trifolium pratense HOM05D003077 ORTHO05D003354 3.6e-12 75.9 95 49.5
CDE08G0053 Ceratophyllum demersum HOM05D003077 ORTHO05D003354 6.1e-12 75.1 152 36.8
AUR62013425 Chenopodium quinoa HOM05D003077 ORTHO05D003354 1.0e-11 74.3 178 34.8
AagrBONN_evm.TU.Sc2ySwM_344.3402__3403 Anthoceros agrestis HOM05D003077 ORTHO05D003354 6.7e-11 71.6 150 32.7
CBR_g45850 Chara braunii HOM05D003077 ORTHO05D003354 4.8e-09 65.5 161 33.5
SEGI_22624 Sequoiadendron giganteum HOM05D003077 ORTHO05D003354 4.8e-09 65.5 114 40.4
HPP92_025168 Vanilla planifolia HOM05D003077 ORTHO05D003354 9.1e-08 61.2 114 40.4
Duzib041G0777 Durio zibethinus HOM05D003077 ORTHO05D003354 1.3e-06 57.4 59 52.5


User provided reference genes

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