Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033894.1 Olea europaea HOM05D005226 ORTHO05D004666 1.9e-56 222.2 111 100.0
Oeu051213.1 Olea europaea HOM05D005226 ORTHO05D004666 1.1e-24 116.7 97 61.9
Cc09_g01800 Coffea canephora HOM05D005226 ORTHO05D004666 6.9e-22 107.5 98 57.1
Nitab4.5_0003254g0050 Nicotiana tabacum HOM05D005226 ORTHO05D004666 6.9e-22 107.5 110 54.5
CAN.G569.14 Capsicum annuum HOM05D005226 ORTHO05D004666 2.9e-20 102.1 104 52.9
TAR627G0695 Trochodendron aralioides HOM05D005226 ORTHO05D004666 2.9e-20 102.1 101 54.5
Nitab4.5_0000005g0440 Nicotiana tabacum HOM05D005226 ORTHO05D004666 1.1e-19 100.1 104 55.8
Aqoxy1G03603 Aquilegia oxysepala HOM05D005226 ORTHO05D004666 1.4e-19 99.8 108 47.2
TAR624G0719 Trochodendron aralioides HOM05D005226 ORTHO05D004666 2.5e-19 99.0 111 51.4
Migut.M01309 Erythranthe guttata HOM05D005226 ORTHO05D004666 3.2e-19 98.6 100 52.0
SGA_v2.0_scaffold4G01918 Striga asiatica HOM05D005226 ORTHO05D004666 9.3e-19 97.1 109 54.1
Duzib235G0113 Durio zibethinus HOM05D005226 ORTHO05D004666 1.2e-18 96.7 106 47.2
Sabra04G0009100 Salix brachista HOM05D005226 ORTHO05D004666 1.2e-18 96.7 103 48.5
SGA_v2.0_scaffold89G27461 Striga asiatica HOM05D005226 ORTHO05D004666 1.6e-18 96.3 108 50.0
CiPaw.10G070100 Carya illinoinensis HOM05D005226 ORTHO05D004666 2.1e-18 95.9 105 49.5
PGSC0003DMG400004522 Solanum tuberosum HOM05D005226 ORTHO05D004666 2.7e-18 95.5 98 52.0
Nitab4.5_0006137g0040 Nicotiana tabacum HOM05D005226 ORTHO05D004666 3.5e-18 95.1 95 55.8
TWI38G0534 Tripterygium wilfordii HOM05D005226 ORTHO05D004666 3.5e-18 95.1 103 47.6
Nn5g29365 Nelumbo nucifera HOM05D005226 ORTHO05D004666 4.6e-18 94.7 107 50.5
MSTRG.13145 Avicennia marina HOM05D005226 ORTHO05D004666 1.0e-17 93.6 82 64.6
COL.COLO4_31758 Corchorus olitorius HOM05D005226 ORTHO05D004666 1.8e-17 92.8 106 43.4
CiPaw.09G090600 Carya illinoinensis HOM05D005226 ORTHO05D004666 2.3e-17 92.4 101 49.5
Dinv20040 Davidia involucrata HOM05D005226 ORTHO05D004666 3.0e-17 92.0 94 56.4
Solyc02g080450.1 Solanum lycopersicum HOM05D005226 ORTHO05D004666 3.0e-17 92.0 94 52.1
Sopen02g025140 Solanum pennellii HOM05D005226 ORTHO05D004666 3.0e-17 92.0 94 52.1
TPR.G7637 Trifolium pratense HOM05D005226 ORTHO05D004666 3.0e-17 92.0 110 43.6
Potri.004G016800 Populus trichocarpa HOM05D005226 ORTHO05D004666 3.9e-17 91.7 102 48.0
Nn1g03549 Nelumbo nucifera HOM05D005226 ORTHO05D004666 5.1e-17 91.3 101 49.5
Medtr2g022960 Medicago truncatula HOM05D005226 ORTHO05D004666 6.7e-17 90.9 110 43.6
Nitab4.5_0000389g0060 Nicotiana tabacum HOM05D005226 ORTHO05D004666 8.7e-17 90.5 89 56.2
Thecc.06G087600 Theobroma cacao HOM05D005226 ORTHO05D004666 8.7e-17 90.5 110 44.5
Thecc.06G219100 Theobroma cacao HOM05D005226 ORTHO05D004666 8.7e-17 90.5 107 44.9
Duzib160G0401 Durio zibethinus HOM05D005226 ORTHO05D004666 1.1e-16 90.1 93 50.5
Ciclev10017536m.g Citrus clementina HOM05D005226 ORTHO05D004666 1.9e-16 89.4 108 46.3
Duzib192G0836 Durio zibethinus HOM05D005226 ORTHO05D004666 1.9e-16 89.4 106 43.4
Rhsim02G0108700 Rhododendron simsii HOM05D005226 ORTHO05D004666 2.5e-16 89.0 87 56.3
Rhsim02G0109500 Rhododendron simsii HOM05D005226 ORTHO05D004666 2.5e-16 89.0 87 56.3
Prupe.4G022200 Prunus persica HOM05D005226 ORTHO05D004666 5.7e-16 87.8 107 47.7
Cfa021903 Carpinus fangiana HOM05D005226 ORTHO05D004666 7.4e-16 87.4 109 48.6
Glyma.13G205400 Glycine max HOM05D005226 ORTHO05D004666 7.4e-16 87.4 93 49.5
Potri.011G002100 Populus trichocarpa HOM05D005226 ORTHO05D004666 7.4e-16 87.4 102 46.1
Glyma.15G107000 Glycine max HOM05D005226 ORTHO05D004666 9.7e-16 87.0 93 48.4
Hma1.2p1_1142F.1_g260990 Hydrangea macrophylla HOM05D005226 ORTHO05D004666 9.7e-16 87.0 94 52.1
MD05G1344200 Malus domestica HOM05D005226 ORTHO05D004666 9.7e-16 87.0 110 47.3
QL05p073519 Quercus lobata HOM05D005226 ORTHO05D004666 9.7e-16 87.0 98 45.9
QL05p073756 Quercus lobata HOM05D005226 ORTHO05D004666 9.7e-16 87.0 98 45.9
Cfa000235 Carpinus fangiana HOM05D005226 ORTHO05D004666 2.8e-15 85.5 110 47.3
Manes.16G008100 Manihot esculenta HOM05D005226 ORTHO05D004666 3.7e-15 85.1 102 47.1
Phvul.006G150300 Phaseolus vulgaris HOM05D005226 ORTHO05D004666 3.7e-15 85.1 109 45.0
Gohir.A05G169600 Gossypium hirsutum HOM05D005226 ORTHO05D004666 4.8e-15 84.7 93 47.3
Gorai.009G178000 Gossypium raimondii HOM05D005226 ORTHO05D004666 4.8e-15 84.7 93 47.3
PGSC0003DMG400016491 Solanum tuberosum HOM05D005226 ORTHO05D004666 6.3e-15 84.3 87 52.9
Lsat_1_v5_gn_4_59601 Lactuca sativa HOM05D005226 ORTHO05D004666 8.2e-15 84.0 114 43.0
DCAR_004212 Daucus carota HOM05D005226 ORTHO05D004666 1.1e-14 83.6 94 47.9
Gohir.D10G013300 Gossypium hirsutum HOM05D005226 ORTHO05D004666 1.4e-14 83.2 93 43.0
Gorai.011G015000 Gossypium raimondii HOM05D005226 ORTHO05D004666 1.4e-14 83.2 93 43.0
Sed0011520 Sechium edule HOM05D005226 ORTHO05D004666 1.8e-14 82.8 110 37.3
VMungo0540G0286 Vigna mungo HOM05D005226 ORTHO05D004666 1.8e-14 82.8 93 48.4
Haze_09878 Corylus avellana HOM05D005226 ORTHO05D004666 2.4e-14 82.4 108 46.3
Gohir.A10G013400 Gossypium hirsutum HOM05D005226 ORTHO05D004666 2.4e-14 82.4 96 41.7
Peaxi162Scf00262g00094 Petunia axillaris HOM05D005226 ORTHO05D004666 2.4e-14 82.4 85 54.1
Gohir.D05G172800 Gossypium hirsutum HOM05D005226 ORTHO05D004666 4.1e-14 81.6 93 46.2
DCAR_008143 Daucus carota HOM05D005226 ORTHO05D004666 5.3e-14 81.3 91 47.3
MD00G1206700 Malus domestica HOM05D005226 ORTHO05D004666 1.2e-13 80.1 113 43.4
MD10G1320200 Malus domestica HOM05D005226 ORTHO05D004666 1.2e-13 80.1 113 43.4
ECA234G1355 Erigeron canadensis HOM05D005226 ORTHO05D004666 1.5e-13 79.7 96 53.1
Peaxi162Scf00565g00021 Petunia axillaris HOM05D005226 ORTHO05D004666 1.5e-13 79.7 78 59.0
PGR004G1778 Punica granatum HOM05D005226 ORTHO05D004666 1.5e-13 79.7 107 42.1
Aqoxy4G01362 Aquilegia oxysepala HOM05D005226 ORTHO05D004666 2.0e-13 79.3 77 51.9
Eucgr.D01311 Eucalyptus grandis HOM05D005226 ORTHO05D004666 2.0e-13 79.3 109 45.0
Eucgr.E04072 Eucalyptus grandis HOM05D005226 ORTHO05D004666 2.0e-13 79.3 90 44.4
Lalb_Chr15g0087551 Lupinus albus HOM05D005226 ORTHO05D004666 2.0e-13 79.3 93 48.4
Eucgr.D01314 Eucalyptus grandis HOM05D005226 ORTHO05D004666 2.6e-13 79.0 109 44.0
Lj6g0027274 Lotus japonicus HOM05D005226 ORTHO05D004666 2.6e-13 79.0 111 42.3
Eucgr.E04071 Eucalyptus grandis HOM05D005226 ORTHO05D004666 3.4e-13 78.6 90 44.4
CANSAT56G2875 Cannabis sativa HOM05D005226 ORTHO05D004666 4.5e-13 78.2 97 45.4
Eucgr.E04074 Eucalyptus grandis HOM05D005226 ORTHO05D004666 4.5e-13 78.2 90 44.4
Eucgr.L02166 Eucalyptus grandis HOM05D005226 ORTHO05D004666 4.5e-13 78.2 109 44.0
Rhsim02G0108200 Rhododendron simsii HOM05D005226 ORTHO05D004666 4.5e-13 78.2 74 60.8
ClCG03G004790 Citrullus lanatus HOM05D005226 ORTHO05D004666 1.0e-12 77.0 81 44.4
RcHm_v2.0_Chr5g0003391 Rosa chinensis HOM05D005226 ORTHO05D004666 1.7e-12 76.3 89 48.3
HanXRQChr16g0515991 Helianthus annuus HOM05D005226 ORTHO05D004666 2.9e-12 75.5 88 51.1
Lalb_Chr18g0056301 Lupinus albus HOM05D005226 ORTHO05D004666 2.9e-12 75.5 109 37.6
MBI18_g02740_MAGBIO Magnolia biondii HOM05D005226 ORTHO05D004666 2.9e-12 75.5 100 45.0
Peaxi162Scf00565g00036 Petunia axillaris HOM05D005226 ORTHO05D004666 2.9e-12 75.5 83 54.2
FvH4_3g02270 Fragaria vesca HOM05D005226 ORTHO05D004666 3.8e-12 75.1 89 46.1
FAN25G2807 Fragaria x ananassa HOM05D005226 ORTHO05D004666 3.8e-12 75.1 89 46.1
SalBow8G4932 Salvia bowleyana HOM05D005226 ORTHO05D004666 3.8e-12 75.1 83 57.8
Sed0027353 Sechium edule HOM05D005226 ORTHO05D004666 8.5e-12 73.9 86 48.8
Haze_06787 Corylus avellana HOM05D005226 ORTHO05D004666 1.1e-11 73.6 92 47.8
Rhsim02G0109000 Rhododendron simsii HOM05D005226 ORTHO05D004666 1.1e-11 73.6 77 54.5
Atru.chr10.2207 Acer truncatum HOM05D005226 ORTHO05D004666 3.2e-11 72.0 99 44.4
CsaV3_1G010830 Cucumis sativus L. HOM05D005226 ORTHO05D004666 7.2e-11 70.9 81 40.7
MELO3C002462.2 Cucumis melo HOM05D005226 ORTHO05D004666 1.2e-10 70.1 82 39.0
PGR042G2779 Punica granatum HOM05D005226 ORTHO05D004666 2.1e-10 69.3 90 43.3
A06p08210 Brassica napus HOM05D005226 ORTHO05D004666 2.7e-10 68.9 113 40.7
BolC5t29718H Brassica oleracea HOM05D005226 ORTHO05D004666 2.7e-10 68.9 114 41.2
BraA06t24021Z Brassica rapa HOM05D005226 ORTHO05D004666 2.7e-10 68.9 113 40.7
ClCG01G022050 Citrullus lanatus HOM05D005226 ORTHO05D004666 2.7e-10 68.9 99 38.4
unitig_749.g13630 Utricularia gibba HOM05D005226 ORTHO05D004666 3.6e-10 68.6 100 41.0
ATR0752G088 Amborella trichopoda HOM05D005226 ORTHO05D004666 1.4e-09 66.6 100 37.0
BcaC05g25032 Brassica carinata HOM05D005226 ORTHO05D004666 1.4e-09 66.6 113 40.7
Sed0005209 Sechium edule HOM05D005226 ORTHO05D004666 1.4e-09 66.6 85 44.7
MELO3C007384.2 Cucumis melo HOM05D005226 ORTHO05D004666 1.8e-09 66.2 107 32.7
A09p64400 Brassica napus HOM05D005226 ORTHO05D004666 2.3e-09 65.9 113 38.9
BraA09t41784Z Brassica rapa HOM05D005226 ORTHO05D004666 2.3e-09 65.9 113 38.9
Gorai.010G180000 Gossypium raimondii HOM05D005226 ORTHO05D004666 3.0e-09 65.5 93 40.9
CsaV3_6G049110 Cucumis sativus L. HOM05D005226 ORTHO05D004666 3.9e-09 65.1 100 36.0
C05p09770 Brassica napus HOM05D005226 ORTHO05D004666 5.1e-09 64.7 113 39.8
Medtr3g463740 Medicago truncatula HOM05D005226 ORTHO05D004666 1.1e-08 63.5 64 48.4
BcaNung04807 Brassica carinata HOM05D005226 ORTHO05D004666 1.5e-08 63.2 114 37.7
Gohir.D06G153975 Gossypium hirsutum HOM05D005226 ORTHO05D004666 1.5e-08 63.2 93 40.9
unitig_26.g9388 Utricularia gibba HOM05D005226 ORTHO05D004666 1.5e-08 63.2 83 45.8
Aa31LG1G3110 Aethionema arabicum HOM05D005226 ORTHO05D004666 2.5e-08 62.4 98 36.7
AL1G22790 Arabidopsis lyrata HOM05D005226 ORTHO05D004666 2.5e-08 62.4 113 38.1
arahy.Tifrunner.gnm1.ann1.1P1WAU Arachis hypogaea HOM05D005226 ORTHO05D004666 3.3e-08 62.0 99 42.4
PSO832G1518 Papaver somniferum HOM05D005226 ORTHO05D004666 4.3e-08 61.6 103 35.0
THA.LOC104818840 Tarenaya hassleriana HOM05D005226 ORTHO05D004666 5.7e-08 61.2 113 35.4
arahy.Tifrunner.gnm1.ann1.89FC4C Arachis hypogaea HOM05D005226 ORTHO05D004666 7.4e-08 60.8 90 42.2
Carub.0001s1129 Capsella rubella HOM05D005226 ORTHO05D004666 7.4e-08 60.8 86 41.9
Glyma.18G063800 Glycine max HOM05D005226 ORTHO05D004666 7.4e-08 60.8 69 46.4
BcaC07g41768 Brassica carinata HOM05D005226 ORTHO05D004666 9.7e-08 60.5 114 36.8
Gohir.A06G148050 Gossypium hirsutum HOM05D005226 ORTHO05D004666 9.7e-08 60.5 93 39.8
PSO210G5560 Papaver somniferum HOM05D005226 ORTHO05D004666 9.7e-08 60.5 101 33.7
arahy.Tifrunner.gnm1.ann1.0GES1T Arachis hypogaea HOM05D005226 ORTHO05D004666 2.2e-07 59.3 62 51.6
Thhalv10009573m.g Eutrema salsugineum HOM05D005226 ORTHO05D004666 2.2e-07 59.3 87 44.8
TPR.G21187 Trifolium pratense HOM05D005226 ORTHO05D004666 2.2e-07 59.3 68 45.6
EL10Ac8g20036 Beta vulgaris HOM05D005226 ORTHO05D004666 4.8e-07 58.2 59 47.5
BcaC07g38677 Brassica carinata HOM05D005226 ORTHO05D004666 4.8e-07 58.2 112 37.5
BolC8t49112H Brassica oleracea HOM05D005226 ORTHO05D004666 4.8e-07 58.2 112 37.5
C08p48100 Brassica napus HOM05D005226 ORTHO05D004666 6.3e-07 57.8 73 45.2
A08p33360 Brassica napus HOM05D005226 ORTHO05D004666 1.4e-06 56.6 101 37.6
C08p14770 Brassica napus HOM05D005226 ORTHO05D004666 1.8e-06 56.2 112 35.7
BcaB08g37410 Brassica carinata HOM05D005226 ORTHO05D004666 2.4e-06 55.8 73 45.2
CARHR011960 Cardamine hirsuta HOM05D005226 ORTHO05D004666 3.1e-06 55.5 87 41.4
BraA08t35253Z Brassica rapa HOM05D005226 ORTHO05D004666 4.1e-06 55.1 101 37.6
AT1G11655 Arabidopsis thaliana HOM05D005226 ORTHO05D004666 5.3e-06 54.7 86 39.5


User provided reference genes

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