Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033885.1 Olea europaea HOM05D005768 ORTHO05D007100 3.1e-75 285.0 144 100.0
Dinv27944 Davidia involucrata HOM05D005768 ORTHO05D007100 1.1e-46 190.3 119 78.2
Atru.chr4.1221 Acer truncatum HOM05D005768 ORTHO05D007100 7.0e-43 177.6 119 68.9
Atru.chr7.2675 Acer truncatum HOM05D005768 ORTHO05D007100 1.6e-42 176.4 119 69.7
Ciclev10022280m.g Citrus clementina HOM05D005768 ORTHO05D007100 4.6e-42 174.9 116 69.0
Hma1.2p1_0442F.1_g153950 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 4.6e-42 174.9 126 67.5
GSVIVG01035325001 Vitis vinifera HOM05D005768 ORTHO05D007100 4.6e-42 174.9 119 71.4
CSS0002565 Camellia sinensis var. sinensis HOM05D005768 ORTHO05D007100 6.0e-42 174.5 119 73.1
MSTRG.25924 Avicennia marina HOM05D005768 ORTHO05D007100 1.3e-41 173.3 119 70.6
Cc00_g09250 Coffea canephora HOM05D005768 ORTHO05D007100 1.3e-41 173.3 119 69.7
SalBow6G5216 Salvia bowleyana HOM05D005768 ORTHO05D007100 2.3e-41 172.6 116 71.6
RcHm_v2.0_Chr6g0306801 Rosa chinensis HOM05D005768 ORTHO05D007100 3.9e-41 171.8 119 68.1
Aqoxy5G03966 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 1.1e-40 170.2 119 69.7
QL12p040865 Quercus lobata HOM05D005768 ORTHO05D007100 1.1e-40 170.2 119 68.1
Migut.A00171 Erythranthe guttata HOM05D005768 ORTHO05D007100 5.6e-40 167.9 116 69.0
Lj7A696G17 Lonicera japonica HOM05D005768 ORTHO05D007100 5.6e-40 167.9 116 72.4
Thecc.09G049100 Theobroma cacao HOM05D005768 ORTHO05D007100 5.6e-40 167.9 138 60.9
TWI34G0524 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 5.6e-40 167.9 122 64.8
CiPaw.07G201500 Carya illinoinensis HOM05D005768 ORTHO05D007100 7.3e-40 167.5 121 66.9
Rhsim07G0145000 Rhododendron simsii HOM05D005768 ORTHO05D007100 7.3e-40 167.5 121 70.2
Hma1.2p1_0603F.1_g187720 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 2.1e-39 166.0 118 69.5
Gohir.D07G024000 Gossypium hirsutum HOM05D005768 ORTHO05D007100 2.8e-39 165.6 119 66.4
Gorai.001G024700 Gossypium raimondii HOM05D005768 ORTHO05D007100 2.8e-39 165.6 119 66.4
SGA_v2.0_scaffold103G30048 Striga asiatica HOM05D005768 ORTHO05D007100 2.8e-39 165.6 110 74.5
TWI63G1351 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 2.8e-39 165.6 118 66.9
Actinidia18208 Actinidia chinensis HOM05D005768 ORTHO05D007100 3.6e-39 165.2 119 69.7
unitig_0.g2567 Utricularia gibba HOM05D005768 ORTHO05D007100 4.7e-39 164.9 119 65.5
Duzib168G0475 Durio zibethinus HOM05D005768 ORTHO05D007100 8.1e-39 164.1 119 65.5
Hund19578 Selenicereus undatus HOM05D005768 ORTHO05D007100 8.1e-39 164.1 124 65.3
COL.COLO4_21009 Corchorus olitorius HOM05D005768 ORTHO05D007100 1.1e-38 163.7 138 58.7
Manes.02G043100 Manihot esculenta HOM05D005768 ORTHO05D007100 1.1e-38 163.7 118 66.1
Cpa.g.sc1868.1 Carica papaya HOM05D005768 ORTHO05D007100 1.4e-38 163.3 122 68.0
Sc09g0009490 Simmondsia chinensis HOM05D005768 ORTHO05D007100 1.4e-38 163.3 120 65.0
TAR383G0888 Trochodendron aralioides HOM05D005768 ORTHO05D007100 1.4e-38 163.3 131 63.4
Prupe.1G443600 Prunus persica HOM05D005768 ORTHO05D007100 1.8e-38 162.9 118 66.9
EL10Ac5g12654 Beta vulgaris HOM05D005768 ORTHO05D007100 2.3e-38 162.5 142 58.5
FAN27G1715 Fragaria x ananassa HOM05D005768 ORTHO05D007100 2.3e-38 162.5 119 65.5
FAN15G1520 Fragaria x ananassa HOM05D005768 ORTHO05D007100 4.0e-38 161.8 119 65.5
AUR62017359 Chenopodium quinoa HOM05D005768 ORTHO05D007100 6.8e-38 161.0 119 66.4
FAN20G2834 Fragaria x ananassa HOM05D005768 ORTHO05D007100 8.9e-38 160.6 119 64.7
AUR62010536 Chenopodium quinoa HOM05D005768 ORTHO05D007100 1.2e-37 160.2 119 65.5
vmacro07473 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 1.2e-37 160.2 121 68.6
Nn6g34840 Nelumbo nucifera HOM05D005768 ORTHO05D007100 2.0e-37 159.5 119 68.1
Eucgr.C02988 Eucalyptus grandis HOM05D005768 ORTHO05D007100 4.4e-37 158.3 119 61.3
BcaB07g32084 Brassica carinata HOM05D005768 ORTHO05D007100 9.9e-37 157.1 136 58.8
Ah.02g116310 Amaranthus hybridus HOM05D005768 ORTHO05D007100 3.7e-36 155.2 119 61.3
Sp1g18590 Schrenkiella parvula HOM05D005768 ORTHO05D007100 3.7e-36 155.2 120 63.3
PSO832G3354 Papaver somniferum HOM05D005768 ORTHO05D007100 4.9e-36 154.8 134 59.7
Sed0022019 Sechium edule HOM05D005768 ORTHO05D007100 4.9e-36 154.8 119 63.0
MELO3C003477.2 Cucumis melo HOM05D005768 ORTHO05D007100 6.4e-36 154.5 139 56.1
PGR044G0118 Punica granatum HOM05D005768 ORTHO05D007100 1.1e-35 153.7 119 58.0
TAR624G0371 Trochodendron aralioides HOM05D005768 ORTHO05D007100 1.1e-35 153.7 142 57.0
Nitab4.5_0000318g0060 Nicotiana tabacum HOM05D005768 ORTHO05D007100 1.4e-35 153.3 110 69.1
Potri.006G234800 Populus trichocarpa HOM05D005768 ORTHO05D007100 1.4e-35 153.3 119 65.5
CANSAT56G2391 Cannabis sativa HOM05D005768 ORTHO05D007100 1.9e-35 152.9 119 62.2
Sabra06G0183200 Salix brachista HOM05D005768 ORTHO05D007100 4.1e-35 151.8 119 66.4
Solyc08g066030.3 Solanum lycopersicum HOM05D005768 ORTHO05D007100 5.4e-35 151.4 120 63.3
Sopen08g019690 Solanum pennellii HOM05D005768 ORTHO05D007100 5.4e-35 151.4 120 63.3
HanXRQChr03g0078001 Helianthus annuus HOM05D005768 ORTHO05D007100 7.1e-35 151.0 122 63.9
PGSC0003DMG401025462 Solanum tuberosum HOM05D005768 ORTHO05D007100 7.1e-35 151.0 120 63.3
Aa31LG7G5050 Aethionema arabicum HOM05D005768 ORTHO05D007100 9.2e-35 150.6 136 56.6
A06p16890 Brassica napus HOM05D005768 ORTHO05D007100 9.2e-35 150.6 140 56.4
CsaV3_3G048420 Cucumis sativus L. HOM05D005768 ORTHO05D007100 9.2e-35 150.6 119 61.3
C07p22730 Brassica napus HOM05D005768 ORTHO05D007100 1.2e-34 150.2 141 56.7
BolC7t42805H Brassica oleracea HOM05D005768 ORTHO05D007100 1.2e-34 150.2 138 57.2
CARHR021320 Cardamine hirsuta HOM05D005768 ORTHO05D007100 2.1e-34 149.4 136 56.6
PSO063G4631 Papaver somniferum HOM05D005768 ORTHO05D007100 2.1e-34 149.4 127 60.6
BcaC06g34845 Brassica carinata HOM05D005768 ORTHO05D007100 4.6e-34 148.3 125 60.8
Peaxi162Scf00699g00655 Petunia axillaris HOM05D005768 ORTHO05D007100 4.6e-34 148.3 106 67.9
THA.LOC104812009 Tarenaya hassleriana HOM05D005768 ORTHO05D007100 4.6e-34 148.3 120 60.0
Lsat_1_v5_gn_3_56860 Lactuca sativa HOM05D005768 ORTHO05D007100 6.0e-34 147.9 115 64.3
PSO063G0290 Papaver somniferum HOM05D005768 ORTHO05D007100 7.8e-34 147.5 122 62.3
PSO832G1534 Papaver somniferum HOM05D005768 ORTHO05D007100 7.8e-34 147.5 140 57.9
Sed0000338 Sechium edule HOM05D005768 ORTHO05D007100 7.8e-34 147.5 141 55.3
AL1G33910 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 1.3e-33 146.7 126 58.7
MD08G1109000 Malus domestica HOM05D005768 ORTHO05D007100 1.3e-33 146.7 123 61.8
AT1G20890 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 1.7e-33 146.4 117 61.5
A07p15420 Brassica napus HOM05D005768 ORTHO05D007100 1.7e-33 146.4 139 55.4
TPR.G29192 Trifolium pratense HOM05D005768 ORTHO05D007100 2.3e-33 146.0 121 62.8
AT1G76480 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 3.0e-33 145.6 119 59.7
Thhalv10008823m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 3.0e-33 145.6 140 55.0
Haze_01966 Corylus avellana HOM05D005768 ORTHO05D007100 3.9e-33 145.2 99 69.7
ClCG02G014210 Citrullus lanatus HOM05D005768 ORTHO05D007100 5.1e-33 144.8 131 56.5
Gohir.A07G022184 Gossypium hirsutum HOM05D005768 ORTHO05D007100 5.1e-33 144.8 99 68.7
Carub.0001s2036 Capsella rubella HOM05D005768 ORTHO05D007100 8.6e-33 144.1 136 55.1
Glyma.19G233100 Glycine max HOM05D005768 ORTHO05D007100 2.5e-32 142.5 120 60.8
Medtr7g112710 Medicago truncatula HOM05D005768 ORTHO05D007100 2.5e-32 142.5 121 62.8
Psat0s1830g0160 Pisum sativum HOM05D005768 ORTHO05D007100 2.5e-32 142.5 117 65.0
Lj1g0020400 Lotus japonicus HOM05D005768 ORTHO05D007100 3.3e-32 142.1 121 61.2
Phvul.006G089400 Phaseolus vulgaris HOM05D005768 ORTHO05D007100 3.3e-32 142.1 120 59.2
TPR.G33208 Trifolium pratense HOM05D005768 ORTHO05D007100 3.3e-32 142.1 117 65.0
Ca_05797_v3 Cicer arietinum L. HOM05D001134 ORTHO05D001035 5.6e-32 141.4 121 62.0
BcaB03g14295 Brassica carinata HOM05D005768 ORTHO05D007100 9.5e-32 140.6 119 62.2
Psat0s1830g0280 Pisum sativum HOM05D005768 ORTHO05D007100 9.5e-32 140.6 120 61.7
Aqoxy7G01356 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 2.1e-31 139.4 119 61.3
ECA234G0765 Erigeron canadensis HOM05D000185 ORTHO05D000105 3.6e-31 138.7 135 56.3
Lalb_Chr24g0397251 Lupinus albus HOM05D005768 ORTHO05D007100 3.6e-31 138.7 119 61.3
vmacro05269 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 1.8e-30 136.3 142 57.7
PSO063G1479 Papaver somniferum HOM05D005768 ORTHO05D007100 2.4e-30 136.0 120 60.0
PSO063G2632 Papaver somniferum HOM05D005768 ORTHO05D007100 2.4e-30 136.0 120 60.0
PSO063G5891 Papaver somniferum HOM05D005768 ORTHO05D007100 2.4e-30 136.0 120 60.0
BraA06t24798Z Brassica rapa HOM05D005768 ORTHO05D007100 3.1e-30 135.6 131 55.7
Nitab4.5_0002021g0070 Nicotiana tabacum HOM05D005768 ORTHO05D007100 2.6e-29 132.5 98 66.3
Lalb_Chr08g0242881 Lupinus albus HOM05D005768 ORTHO05D007100 5.8e-29 131.3 116 55.2
FvH4_2g35150 Fragaria vesca HOM05D005768 ORTHO05D007100 8.4e-28 127.5 89 67.4
SEGI_27706 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 3.2e-27 125.6 132 51.5
arahy.Tifrunner.gnm1.ann1.FJ9VJT Arachis hypogaea HOM05D005768 ORTHO05D007100 6.0e-26 121.3 120 55.8
MBI02_g46884_MAGBIO Magnolia biondii HOM05D000614 ORTHO05D007100 1.0e-25 120.6 118 57.6
C05p19520 Brassica napus HOM05D005768 ORTHO05D007100 2.5e-24 115.9 112 57.1
BolC5t30654H Brassica oleracea HOM05D005768 ORTHO05D007100 2.5e-24 115.9 112 57.1
HPP92_009604 Vanilla planifolia HOM05D005768 ORTHO05D007100 2.5e-24 115.9 115 52.2
Os03g0804100 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 5.6e-24 114.8 119 52.9
Thhalv10019630m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 9.6e-24 114.0 102 58.8
AL2G36620 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 3.6e-23 112.1 136 47.1
MBI02_g46987_MAGBIO Magnolia biondii HOM05D005768 ORTHO05D007100 1.8e-22 109.8 84 67.9
Zm00001eb061390 Zea mays HOM05D005768 ORTHO05D007100 6.9e-22 107.8 116 50.9
PSO832G4156 Papaver somniferum HOM05D005768 ORTHO05D007100 9.0e-22 107.5 103 56.3
Os08g0374900 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 9.9e-21 104.0 119 50.4
SalBow4G3076 Salvia bowleyana HOM05D005768 ORTHO05D007100 1.7e-17 93.2 116 45.7
HanXRQChr14g0439211 Helianthus annuus HOM05D005768 ORTHO05D007100 8.7e-17 90.9 108 50.0
ATR0693G003 Amborella trichopoda HOM05D005768 ORTHO05D007100 1.9e-16 89.7 120 43.3
Mapoly0062s0068 Marchantia polymorpha HOM05D005768 ORTHO05D007100 2.5e-16 89.4 130 43.1
DCAR_003074 Daucus carota HOM05D001613 ORTHO05D001556 8.1e-15 84.3 75 58.7
Oeu002722.1 Olea europaea HOM05D005768 ORTHO05D007100 6.9e-14 81.3 44 84.1
Pp3c24_1520 Physcomitrium patens HOM05D005768 ORTHO05D007100 4.5e-13 78.6 122 38.5
Glyma.03G235400 Glycine max HOM05D005768 ORTHO05D007100 1.2e-10 70.5 76 52.6
SEGI_03586 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 4.6e-10 68.6 59 55.9
ClCG11G015010 Citrullus lanatus HOM05D005768 ORTHO05D007100 6.7e-09 64.7 60 58.3
CBR_g130 Chara braunii HOM05D000019 ORTHO05D000002 1.9e-08 63.2 89 42.7
Sc09g0009520 Simmondsia chinensis HOM05D005768 ORTHO05D007100 1.8e-06 56.6 43 58.1
BcaC05g25998 Brassica carinata HOM05D005768 ORTHO05D007100 2.4e-06 56.2 40 62.5
Cre12.g547734 Chlamydomonas reinhardtii HOM05D005768 ORTHO05D007100 5.3e-06 55.1 77 40.3


User provided reference genes

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