Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033267.1 Olea europaea HOM05D005413 ORTHO05D006536 1.8e-208 729.2 409 100.0
Dinv04422 Davidia involucrata HOM05D005413 ORTHO05D006536 1.4e-56 224.6 323 46.1
CSS0050484 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 2.5e-53 213.8 322 44.7
Nn2g14375 Nelumbo nucifera HOM05D005413 ORTHO05D006536 1.7e-49 201.1 323 42.4
Hma1.2p1_0098F.1_g048260 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 2.7e-47 193.7 323 42.4
Hund06812 Selenicereus undatus HOM05D005413 ORTHO05D006536 3.9e-46 189.9 330 41.2
TAR623G0045 Trochodendron aralioides HOM05D005413 ORTHO05D006536 3.6e-44 183.3 320 40.0
Sabra10G0191100 Salix brachista HOM05D005413 ORTHO05D006536 9.0e-43 178.7 207 51.2
Sc09g0004800 Simmondsia chinensis HOM05D005413 ORTHO05D006536 7.6e-42 175.6 332 39.5
Potri.010G244600 Populus trichocarpa HOM05D005413 ORTHO05D006536 9.9e-42 175.3 228 48.7
Potri.008G001700 Populus trichocarpa HOM05D005413 ORTHO05D006536 2.2e-41 174.1 227 48.5
Potri.008G015500 Populus trichocarpa HOM05D005413 ORTHO05D006536 9.3e-40 168.7 227 47.1
GSVIVG01037530001 Vitis vinifera HOM05D005413 ORTHO05D006536 2.1e-39 167.5 317 38.5
MBI15_g31416_MAGBIO Magnolia biondii HOM05D005413 ORTHO05D006536 3.5e-39 166.8 343 35.9
CSS0023574 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 1.8e-38 164.5 216 46.8
Cfa010502 Carpinus fangiana HOM05D005413 ORTHO05D006536 2.3e-38 164.1 340 39.1
Dinv03807 Davidia involucrata HOM05D005413 ORTHO05D006536 1.9e-37 161.0 160 56.9
Ciclev10028962m.g Citrus clementina HOM05D005413 ORTHO05D006536 3.3e-37 160.2 320 36.9
TAR633G2414 Trochodendron aralioides HOM05D005413 ORTHO05D006536 4.0e-35 153.3 221 44.8
Sabra08G0009400 Salix brachista HOM05D005413 ORTHO05D006536 1.2e-34 151.8 218 44.0
Thecc.10G119400 Theobroma cacao HOM05D005413 ORTHO05D006536 2.6e-34 150.6 316 40.2
vmacro07276 Vaccinium macrocarpon HOM05D005413 ORTHO05D006536 4.5e-34 149.8 154 54.5
Rhsim03G0094100 Rhododendron simsii HOM05D005413 ORTHO05D006536 1.0e-33 148.7 164 53.0
Haze_03431 Corylus avellana HOM05D005413 ORTHO05D006536 1.3e-33 148.3 326 37.4
Lj2C36T10 Lonicera japonica HOM05D005413 ORTHO05D006536 1.3e-33 148.3 335 36.1
QL04p048808 Quercus lobata HOM05D005413 ORTHO05D006536 3.8e-33 146.7 372 34.1
Actinidia11676 Actinidia chinensis HOM05D005413 ORTHO05D006536 2.5e-32 144.1 318 36.5
Lj2A950G18 Lonicera japonica HOM05D005413 ORTHO05D006536 7.1e-32 142.5 197 45.7
Gorai.009G081500 Gossypium raimondii HOM05D005413 ORTHO05D006536 3.5e-31 140.2 327 35.2
Gohir.D05G079900 Gossypium hirsutum HOM05D005413 ORTHO05D006536 4.6e-31 139.8 328 36.0
Medtr4g050330 Medicago truncatula HOM05D005413 ORTHO05D006536 4.6e-31 139.8 325 35.1
TPR.G4599 Trifolium pratense HOM05D005413 ORTHO05D006536 4.6e-31 139.8 327 35.2
Actinidia37056 Actinidia chinensis HOM05D005413 ORTHO05D006536 6.0e-31 139.4 318 34.9
Dinv18856 Davidia involucrata HOM05D005413 ORTHO05D006536 6.0e-31 139.4 318 34.0
Gohir.A05G077100 Gossypium hirsutum HOM05D005413 ORTHO05D006536 6.0e-31 139.4 327 34.9
CiPaw.14G092700 Carya illinoinensis HOM05D005413 ORTHO05D006536 1.0e-30 138.7 320 33.4
Aqoxy1G00612 Aquilegia oxysepala HOM05D005413 ORTHO05D006536 1.8e-30 137.9 330 33.9
MSTRG.12398 Avicennia marina HOM05D005413 ORTHO05D006536 1.8e-30 137.9 221 41.6
Ca_19483_v3 Cicer arietinum L. HOM05D005413 ORTHO05D006536 3.0e-30 137.1 322 34.8
ATR1120G017 Amborella trichopoda HOM05D005413 ORTHO05D006536 3.9e-30 136.7 327 34.6
AUR62024117 Chenopodium quinoa HOM05D005413 ORTHO05D006536 8.7e-30 135.6 306 35.0
ECA238G0598 Erigeron canadensis HOM05D005413 ORTHO05D006536 1.1e-29 135.2 322 35.1
PGSC0003DMG400002998 Solanum tuberosum HOM05D005413 ORTHO05D006536 1.1e-29 135.2 230 40.4
Lj3g0006130 Lotus japonicus HOM05D005413 ORTHO05D006536 1.5e-29 134.8 322 34.8
TWI79G1192 Tripterygium wilfordii HOM05D005413 ORTHO05D006536 1.5e-29 134.8 223 42.2
Hma1.2p1_0101F.1_g049660 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 2.5e-29 134.0 323 35.0
Lj5g0017620 Lotus japonicus HOM05D005413 ORTHO05D006536 2.5e-29 134.0 202 43.6
Lalb_Chr19g0136161 Lupinus albus HOM05D005413 ORTHO05D006536 1.3e-28 131.7 324 34.6
CDE04G1023 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 1.6e-28 131.3 346 31.5
AUR62005613 Chenopodium quinoa HOM05D005413 ORTHO05D006536 1.6e-28 131.3 214 43.0
HPP92_015644 Vanilla planifolia HOM05D005413 ORTHO05D006536 6.2e-28 129.4 327 34.9
Ah.03g136210 Amaranthus hybridus HOM05D005413 ORTHO05D006536 8.2e-28 129.0 304 33.6
Cc01_g07840 Coffea canephora HOM05D005413 ORTHO05D006536 8.2e-28 129.0 197 42.6
Migut.D02382 Erythranthe guttata HOM05D005413 ORTHO05D006536 8.2e-28 129.0 218 41.3
Lsat_1_v5_gn_2_106300 Lactuca sativa HOM05D005413 ORTHO05D006536 8.2e-28 129.0 329 33.7
Duzib168G1403 Durio zibethinus HOM05D005413 ORTHO05D006536 1.1e-27 128.6 326 33.4
EL10Ac6g13493 Beta vulgaris HOM05D005413 ORTHO05D006536 1.4e-27 128.3 233 42.1
Nitab4.5_0000158g0110 Nicotiana tabacum HOM05D005413 ORTHO05D006536 1.4e-27 128.3 235 38.7
Oeu031446.2 Olea europaea HOM05D005413 ORTHO05D006536 1.4e-27 128.3 223 40.4
Ca_10423_v3 Cicer arietinum L. HOM05D005413 ORTHO05D006536 1.8e-27 127.9 197 44.7
PGR119G0748 Punica granatum HOM05D005413 ORTHO05D006536 3.1e-27 127.1 323 34.1
Eucgr.J00585 Eucalyptus grandis HOM05D005413 ORTHO05D006536 4.1e-27 126.7 325 33.8
Thecc.09G267600 Theobroma cacao HOM05D005413 ORTHO05D006536 4.1e-27 126.7 329 33.4
Psat7g200680 Pisum sativum HOM05D005413 ORTHO05D006536 5.3e-27 126.3 323 34.1
PSO339G2181 Papaver somniferum HOM05D005413 ORTHO05D006536 9.0e-27 125.6 264 35.6
Sopen11g029620 Solanum pennellii HOM05D005413 ORTHO05D006536 9.0e-27 125.6 230 38.7
Solyc11g071950.3 Solanum lycopersicum HOM05D005413 ORTHO05D006536 1.5e-26 124.8 230 38.7
Atru.chr3.3078 Acer truncatum HOM05D005413 ORTHO05D006536 2.6e-26 124.0 320 32.2
Atru.chr3.3087 Acer truncatum HOM05D005413 ORTHO05D006536 2.6e-26 124.0 320 32.2
PSO384G0849 Papaver somniferum HOM05D005413 ORTHO05D006536 3.4e-26 123.6 265 33.6
arahy.Tifrunner.gnm1.ann1.BD57S3 Arachis hypogaea HOM05D005413 ORTHO05D006536 5.8e-26 122.9 204 43.6
arahy.Tifrunner.gnm1.ann1.0IPW5R Arachis hypogaea HOM05D005413 ORTHO05D006536 1.0e-25 122.1 206 42.7
Duzib170G0305 Durio zibethinus HOM05D005413 ORTHO05D006536 1.0e-25 122.1 326 32.8
Nitab4.5_0008364g0010 Nicotiana tabacum HOM05D005413 ORTHO05D006536 1.0e-25 122.1 212 39.6
Peaxi162Scf00429g00512 Petunia axillaris HOM05D005413 ORTHO05D006536 1.0e-25 122.1 200 42.5
RcHm_v2.0_Chr5g0049091 Rosa chinensis HOM05D005413 ORTHO05D006536 1.0e-25 122.1 222 39.2
ClCG02G022490 Citrullus lanatus HOM05D005413 ORTHO05D006536 3.8e-25 120.2 321 31.8
FAN11G2501 Fragaria x ananassa HOM05D005413 ORTHO05D006536 3.8e-25 120.2 222 38.3
FvH4_3g26150 Fragaria vesca HOM05D005413 ORTHO05D006536 6.5e-25 119.4 223 39.0
QL01p019216 Quercus lobata HOM05D005413 ORTHO05D006536 6.5e-25 119.4 323 31.9
vmacro14313 Vaccinium macrocarpon HOM05D005413 ORTHO05D006536 6.5e-25 119.4 369 29.5
TPR.G10267 Trifolium pratense HOM05D005413 ORTHO05D006536 1.4e-24 118.2 212 40.6
VMungo1127G2102 Vigna mungo HOM05D005413 ORTHO05D006536 1.4e-24 118.2 220 39.1
Manes.11G103700 Manihot esculenta HOM05D005413 ORTHO05D006536 1.9e-24 117.9 331 33.2
SGA_v2.0_scaffold22G09835 Striga asiatica HOM05D005413 ORTHO05D006536 2.5e-24 117.5 175 44.6
COL.COLO4_00160 Corchorus olitorius HOM05D005413 ORTHO05D006536 3.2e-24 117.1 206 40.8
Rhsim01G0199900 Rhododendron simsii HOM05D005413 ORTHO05D006536 7.2e-24 115.9 320 32.2
Prupe.6G147200 Prunus persica HOM05D005413 ORTHO05D006536 9.3e-24 115.5 320 32.5
Medtr1g090350 Medicago truncatula HOM05D005413 ORTHO05D006536 2.7e-23 114.0 205 42.9
MD11G1174800 Malus domestica HOM05D005413 ORTHO05D006536 6.1e-23 112.8 222 37.4
Phvul.007G136700 Phaseolus vulgaris HOM05D005413 ORTHO05D006536 6.1e-23 112.8 175 44.6
CsaV3_6G038630 Cucumis sativus L. HOM05D005413 ORTHO05D006536 7.9e-23 112.5 322 31.1
FAN25G1874 Fragaria x ananassa HOM05D005413 ORTHO05D006536 7.9e-23 112.5 222 36.9
HanXRQChr05g0137071 Helianthus annuus HOM05D005413 ORTHO05D006536 7.9e-23 112.5 141 48.2
SEGI_03865 Sequoiadendron giganteum HOM05D005413 ORTHO05D006536 1.0e-22 112.1 341 32.0
MELO3C014525.2 Cucumis melo HOM05D005413 ORTHO05D006536 1.3e-22 111.7 322 31.1
arahy.Tifrunner.gnm1.ann1.K4CWT5 Arachis hypogaea HOM05D005413 ORTHO05D006536 2.3e-22 110.9 337 30.9
Thhalv10014324m.g Eutrema salsugineum HOM05D005413 ORTHO05D006536 3.0e-22 110.5 231 36.4
Lalb_Chr21g0312751 Lupinus albus HOM05D005413 ORTHO05D006536 3.9e-22 110.2 171 43.3
Zm00001eb012330 Zea mays HOM05D005413 ORTHO05D006536 3.9e-22 110.2 236 35.6
arahy.Tifrunner.gnm1.ann1.C0JSMI Arachis hypogaea HOM05D005413 ORTHO05D006536 6.7e-22 109.4 223 37.2
FAN16G0400 Fragaria x ananassa HOM05D005413 ORTHO05D006536 1.1e-21 108.6 191 39.8
FAN16G2334 Fragaria x ananassa HOM05D005413 ORTHO05D006536 1.1e-21 108.6 191 39.8
DCAR_012252 Daucus carota HOM05D005413 ORTHO05D006536 1.5e-21 108.2 289 33.9
CDE07G0886 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 1.9e-21 107.8 219 38.4
Haze_03425 Corylus avellana HOM05D005413 ORTHO05D006536 2.5e-21 107.5 208 38.0
Lalb_Chr03g0028501 Lupinus albus HOM05D005413 ORTHO05D006536 2.5e-21 107.5 322 31.4
Rhsim01G0199600 Rhododendron simsii HOM05D005413 ORTHO05D006536 5.7e-21 106.3 335 30.1
Glyma.12G095900 Glycine max HOM05D005413 ORTHO05D006536 7.4e-21 105.9 321 31.8
Phvul.011G100200 Phaseolus vulgaris HOM05D005413 ORTHO05D006536 1.6e-20 104.8 321 31.5
Os03g0274700 Oryza sativa ssp. japonica HOM05D005413 ORTHO05D006536 1.8e-19 101.3 219 37.0
BcaC01g06609 Brassica carinata HOM05D005413 ORTHO05D006536 2.4e-19 100.9 225 35.6
BolC3t13687H Brassica oleracea HOM05D005413 ORTHO05D006536 2.4e-19 100.9 225 35.6
unitig_899.g15382 Utricularia gibba HOM05D005413 ORTHO05D006536 3.1e-19 100.5 205 35.6
MD03G1159500 Malus domestica HOM05D005413 ORTHO05D006536 4.1e-19 100.1 322 29.8
Sed0018758 Sechium edule HOM05D005413 ORTHO05D006536 4.1e-19 100.1 161 41.6
C03p12140 Brassica napus HOM05D005413 ORTHO05D006536 9.0e-19 99.0 225 35.1
DCAR_018207 Daucus carota HOM05D005413 ORTHO05D006536 9.0e-19 99.0 322 31.4
SalBow6G6902 Salvia bowleyana HOM05D005413 ORTHO05D006536 9.0e-19 99.0 193 38.9
BraA03t10367Z Brassica rapa HOM05D005413 ORTHO05D006536 2.0e-18 97.8 225 35.1
Sp6g23150 Schrenkiella parvula HOM05D005413 ORTHO05D006536 7.7e-18 95.9 236 33.1
A03p10550 Brassica napus HOM05D005413 ORTHO05D006536 2.2e-17 94.4 225 34.7
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 6.5e-17 92.8 325 29.2
CARHR191490 Cardamine hirsuta HOM05D005413 ORTHO05D006536 1.4e-16 91.7 238 33.2
Glyma.11G171773 Glycine max HOM05D005413 ORTHO05D006536 1.4e-16 91.7 334 30.8
Dinv33562 Davidia involucrata HOM05D005413 ORTHO05D006536 2.0e-13 81.3 107 43.9
Cpa.g.sc33.125 Carica papaya HOM05D005413 ORTHO05D006536 4.3e-13 80.1 82 52.4
FAN21G0466 Fragaria x ananassa HOM05D005413 ORTHO05D006536 5.7e-13 79.7 222 31.1
Aa31LG1G13390 Aethionema arabicum HOM05D005413 ORTHO05D006536 1.3e-12 78.6 236 29.7
PGR044G1324 Punica granatum HOM05D003044 ORTHO05D001869 3.7e-12 77.0 69 58.0
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 8.2e-12 75.9 211 29.9
BcaB01g04747 Brassica carinata HOM05D005413 ORTHO05D006536 1.4e-11 75.1 215 30.7
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 5.3e-11 73.2 263 27.8
Carub.0006s1968 Capsella rubella HOM05D005413 ORTHO05D006536 5.9e-10 69.7 235 28.5
Oeu029208.1 Olea europaea HOM05D005413 ORTHO05D006536 3.8e-09 67.0 82 45.1
THA.LOC104810942 Tarenaya hassleriana HOM05D001091 ORTHO05D001020 6.5e-09 66.2 214 29.9
AT5G22040 Arabidopsis thaliana HOM05D005413 ORTHO05D006536 2.5e-08 64.3 235 29.8
AL6G33000 Arabidopsis lyrata HOM05D005413 ORTHO05D006536 1.6e-07 61.6 233 29.2
Dinv03808 Davidia involucrata HOM05D005413 ORTHO05D006536 6.1e-07 59.7 128 39.8
THA.LOC104815083 Tarenaya hassleriana HOM05D005413 ORTHO05D006536 1.8e-06 58.2 304 24.7
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 5.1e-06 56.6 103 39.8


User provided reference genes

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