Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033131.1 Olea europaea HOM05D001044 ORTHO05D008486 2.5e-19 97.8 50 100.0
Oeu053115.1 Olea europaea HOM05D001044 ORTHO05D008486 3.8e-12 73.9 43 86.0
Haze_08717 Corylus avellana HOM05D001044 ORTHO05D008486 1.6e-10 68.6 43 79.1
QL02p032522 Quercus lobata HOM05D001044 ORTHO05D008486 1.0e-09 65.9 43 74.4
SGA_v2.0_scaffold163G37966 Striga asiatica HOM05D001044 ORTHO05D008486 1.4e-09 65.5 43 74.4
CiPaw.11G126800 Carya illinoinensis HOM05D001044 ORTHO05D008486 1.8e-09 65.1 43 72.1
Migut.E01805 Erythranthe guttata HOM05D001044 ORTHO05D008486 2.3e-09 64.7 43 65.1
Cc08_g15530 Coffea canephora HOM05D001044 ORTHO05D008486 3.9e-09 63.9 43 67.4
Sabra03G0096700 Salix brachista HOM05D001044 ORTHO05D008486 3.9e-09 63.9 43 67.4
PSO170G5857 Papaver somniferum HOM05D001044 ORTHO05D008486 5.1e-09 63.5 42 69.0
Potri.003G134300 Populus trichocarpa HOM05D001044 ORTHO05D008486 5.1e-09 63.5 43 67.4
Atru.chr9.2079 Acer truncatum HOM05D001044 ORTHO05D008486 6.7e-09 63.2 43 69.8
PSO063G4777 Papaver somniferum HOM05D001044 ORTHO05D008486 6.7e-09 63.2 42 69.0
CsaV3_5G002250 Cucumis sativus L. HOM05D001044 ORTHO05D008486 1.1e-08 62.4 43 67.4
Cfa012268 Carpinus fangiana HOM05D001044 ORTHO05D008486 1.5e-08 62.0 43 72.1
Rhsim02G0237500 Rhododendron simsii HOM05D001044 ORTHO05D008486 1.5e-08 62.0 43 67.4
TAR629G0277 Trochodendron aralioides HOM05D001044 ORTHO05D008486 2.0e-08 61.6 42 66.7
Manes.02G014750 Manihot esculenta HOM05D001044 ORTHO05D008486 2.6e-08 61.2 43 65.1
ClCG01G002130 Citrullus lanatus HOM05D001044 ORTHO05D008486 4.4e-08 60.5 43 67.4
GSVIVG01019449001 Vitis vinifera HOM05D001044 ORTHO05D008486 4.4e-08 60.5 43 69.8
MBI06_g14407_MAGBIO Magnolia biondii HOM05D001044 ORTHO05D008486 5.7e-08 60.1 39 71.8
RcHm_v2.0_Chr7g0196061 Rosa chinensis HOM05D001044 ORTHO05D008486 5.7e-08 60.1 43 65.1
Cpa.g.sc321.3 Carica papaya HOM05D001044 ORTHO05D008486 7.4e-08 59.7 43 67.4
Haze_21307 Corylus avellana HOM05D001044 ORTHO05D008486 7.4e-08 59.7 44 68.2
MD06G1096200 Malus domestica HOM05D001044 ORTHO05D008486 1.7e-07 58.5 43 60.5
PGR031G0274 Punica granatum HOM05D001044 ORTHO05D008486 2.2e-07 58.2 41 68.3
MELO3C005729.2 Cucumis melo HOM05D001044 ORTHO05D008486 2.8e-07 57.8 44 65.9
Sed0026915 Sechium edule HOM05D001044 ORTHO05D008486 2.8e-07 57.8 43 65.1
vmacro11419 Vaccinium macrocarpon HOM05D001044 ORTHO05D008486 2.8e-07 57.8 43 62.8
Gohir.A12G232500 Gossypium hirsutum HOM05D001044 ORTHO05D008486 3.7e-07 57.4 43 65.1
TWI60G0564 Tripterygium wilfordii HOM05D001044 ORTHO05D008486 3.7e-07 57.4 43 62.8
Aqoxy5G04043 Aquilegia oxysepala HOM05D001044 ORTHO05D008486 4.8e-07 57.0 42 64.3
CSS0027074 Camellia sinensis var. sinensis HOM05D001044 ORTHO05D008486 4.8e-07 57.0 42 66.7
FAN04G1718 Fragaria x ananassa HOM05D001044 ORTHO05D008486 4.8e-07 57.0 43 62.8
FvH4_5g03670 Fragaria vesca HOM05D001044 ORTHO05D008486 6.3e-07 56.6 43 62.8
FAN18G2024 Fragaria x ananassa HOM05D001044 ORTHO05D008486 6.3e-07 56.6 43 62.8
Gorai.008G251200 Gossypium raimondii HOM05D001044 ORTHO05D008486 6.3e-07 56.6 43 65.1
Prupe.5G110800 Prunus persica HOM05D001044 ORTHO05D008486 6.3e-07 56.6 43 62.8
Dinv38884 Davidia involucrata HOM05D001044 ORTHO05D008486 8.2e-07 56.2 42 61.9
Gohir.D12G234900 Gossypium hirsutum HOM05D001044 ORTHO05D008486 1.1e-06 55.8 43 62.8
Lj2A175T71 Lonicera japonica HOM05D001044 ORTHO05D008486 1.1e-06 55.8 42 59.5
COL.COLO4_08333 Corchorus olitorius HOM05D001044 ORTHO05D008486 1.4e-06 55.5 43 62.8
Duzib205G1268 Durio zibethinus HOM05D001044 ORTHO05D008486 1.4e-06 55.5 43 62.8
Thecc.03G289400 Theobroma cacao HOM05D001044 ORTHO05D008486 1.8e-06 55.1 43 62.8
Hma1.2p1_0216F.1_g091280 Hydrangea macrophylla HOM05D001044 ORTHO05D008486 2.4e-06 54.7 43 60.5
Actinidia04223 Actinidia chinensis HOM05D001044 ORTHO05D008486 3.1e-06 54.3 42 64.3
TAR629G2178 Trochodendron aralioides HOM05D001044 ORTHO05D008486 4.1e-06 53.9 38 63.2
CANSAT35G0786 Cannabis sativa HOM05D001044 ORTHO05D008486 7.0e-06 53.1 43 58.1
Eucgr.D01791 Eucalyptus grandis HOM05D001044 ORTHO05D008486 7.0e-06 53.1 43 65.1
FAN08G0452 Fragaria x ananassa HOM05D001044 ORTHO05D008486 7.0e-06 53.1 40 60.0
Ciclev10020858m.g Citrus clementina HOM05D001044 ORTHO05D008486 9.1e-06 52.8 43 58.1


User provided reference genes

Program Settings