Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030852.1 Olea europaea HOM05D001829 ORTHO05D003548 2.2e-126 455.7 235 100.0
Oeu045913.1 Olea europaea HOM05D001829 ORTHO05D003548 1.8e-83 313.2 214 77.1
Dinv19424 Davidia involucrata HOM05D001829 ORTHO05D003548 1.2e-68 263.8 258 58.9
SalBow7G4033 Salvia bowleyana HOM05D001829 ORTHO05D003548 2.6e-63 246.1 241 58.1
Actinidia26178 Actinidia chinensis HOM05D001829 ORTHO05D003548 5.5e-61 238.4 255 58.4
Manes.07G025700 Manihot esculenta HOM05D001829 ORTHO05D003548 9.4e-61 237.7 236 59.3
Rhsim05G0113200 Rhododendron simsii HOM05D001829 ORTHO05D003548 7.9e-60 234.6 255 54.5
GSVIVG01023232001 Vitis vinifera HOM05D001829 ORTHO05D003548 7.9e-60 234.6 249 54.6
Migut.B00752 Erythranthe guttata HOM05D001829 ORTHO05D003548 1.4e-59 233.8 254 55.1
Hma1.2p1_0633F.1_g192740 Hydrangea macrophylla HOM05D001829 ORTHO05D003548 3.0e-59 232.6 253 56.1
CSS0015167 Camellia sinensis var. sinensis HOM05D001829 ORTHO05D003548 8.8e-59 231.1 242 56.2
Dinv29604 Davidia involucrata HOM05D001829 ORTHO05D003548 1.5e-58 230.3 243 56.4
Potri.004G225800 Populus trichocarpa HOM05D001829 ORTHO05D003548 2.0e-58 229.9 250 54.8
Hma1.2p1_0884F.1_g232370 Hydrangea macrophylla HOM05D001829 ORTHO05D003548 5.7e-58 228.4 255 54.9
MSTRG.27868 Avicennia marina HOM05D001829 ORTHO05D003548 1.3e-57 227.3 254 54.7
Potri.003G005700 Populus trichocarpa HOM05D001829 ORTHO05D003548 2.8e-57 226.1 247 57.1
Migut.N00848 Erythranthe guttata HOM05D001829 ORTHO05D003548 1.8e-56 223.4 254 55.5
vmacro19858 Vaccinium macrocarpon HOM05D001829 ORTHO05D003548 4.1e-56 222.2 254 53.1
Sabra01G0171500 Salix brachista HOM05D001829 ORTHO05D003548 6.9e-56 221.5 254 54.3
Oeu043625.3 Olea europaea HOM05D001829 ORTHO05D003548 1.2e-55 220.7 254 53.9
SGA_v2.0_scaffold42G15901 Striga asiatica HOM05D001829 ORTHO05D003548 1.5e-55 220.3 215 57.2
Peaxi162Scf00152g01538 Petunia axillaris HOM05D001829 ORTHO05D003548 2.0e-55 219.9 232 54.7
Atru.chr6.543 Acer truncatum HOM05D001829 ORTHO05D003548 2.2e-54 216.5 255 54.1
Cc02_g23320 Coffea canephora HOM05D001829 ORTHO05D003548 6.5e-54 214.9 253 55.3
QL02p100929 Quercus lobata HOM05D001829 ORTHO05D003548 1.9e-53 213.4 254 51.2
CAN.G855.15 Capsicum annuum HOM05D001829 ORTHO05D003548 2.5e-53 213.0 235 54.0
Rhsim11G0121900 Rhododendron simsii HOM05D001829 ORTHO05D003548 2.5e-53 213.0 264 51.9
Sopen01g045770 Solanum pennellii HOM05D001829 ORTHO05D003548 3.6e-52 209.1 215 57.2
Nitab4.5_0000787g0020 Nicotiana tabacum HOM05D001829 ORTHO05D003548 1.0e-51 207.6 245 51.4
Ciclev10000901m.g Citrus clementina HOM05D001829 ORTHO05D003548 1.4e-51 207.2 253 53.0
ECA236G4953 Erigeron canadensis HOM05D001829 ORTHO05D003548 5.1e-51 205.3 251 56.6
Manes.10G116400 Manihot esculenta HOM05D001829 ORTHO05D003548 1.1e-50 204.1 252 52.4
Actinidia01613 Actinidia chinensis HOM05D000487 ORTHO05D000405 2.0e-50 203.4 224 55.8
Sopen10g009260 Solanum pennellii HOM05D001829 ORTHO05D003548 2.8e-49 199.5 254 50.0
CiPaw.05G003800 Carya illinoinensis HOM05D001829 ORTHO05D003548 1.1e-48 197.6 254 48.4
Nitab4.5_0005169g0060 Nicotiana tabacum HOM05D001829 ORTHO05D003548 1.4e-48 197.2 245 49.8
Haze_10033 Corylus avellana HOM05D001829 ORTHO05D003548 3.1e-48 196.1 254 48.8
Peaxi162Scf00011g01537 Petunia axillaris HOM05D001829 ORTHO05D003548 7.0e-48 194.9 241 51.0
SGA_v2.0_scaffold249G44938 Striga asiatica HOM05D001829 ORTHO05D003548 6.5e-46 188.3 242 51.2
Thecc.02G016800 Theobroma cacao HOM05D001829 ORTHO05D003548 4.2e-45 185.7 255 52.2
TWI59G0266 Tripterygium wilfordii HOM05D001829 ORTHO05D003548 4.2e-45 185.7 249 49.4
Sabra03G0002900 Salix brachista HOM05D001829 ORTHO05D007093 5.5e-45 185.3 292 47.9
Solyc01g103420.4 Solanum lycopersicum HOM05D001829 ORTHO05D003548 1.6e-44 183.7 200 55.0
Solyc10g044450.3 Solanum lycopersicum HOM05D001829 ORTHO05D003548 8.8e-43 177.9 235 46.8
PGR042G1417 Punica granatum HOM05D001829 ORTHO05D003548 1.1e-42 177.6 248 48.4
vmacro01706 Vaccinium macrocarpon HOM05D001829 ORTHO05D003548 1.1e-42 177.6 252 48.0
Duzib132G1055 Durio zibethinus HOM05D001829 ORTHO05D003548 1.5e-42 177.2 255 51.0
TAR628G0621 Trochodendron aralioides HOM05D001829 ORTHO05D003548 1.7e-41 173.7 330 41.8
Actinidia38991 Actinidia chinensis HOM05D001829 ORTHO05D003548 2.2e-41 173.3 210 50.0
COL.COLO4_17710 Corchorus olitorius HOM05D001829 ORTHO05D003548 3.7e-41 172.6 254 49.2
TAR381G0284 Trochodendron aralioides HOM05D001829 ORTHO05D003548 4.8e-41 172.2 295 42.4
Medtr2g005600 Medicago truncatula HOM05D001829 ORTHO05D003548 3.1e-40 169.5 255 47.5
Psat1g222920 Pisum sativum HOM05D001829 ORTHO05D003548 3.1e-40 169.5 253 45.1
MD08G1243800 Malus domestica HOM05D001829 ORTHO05D003548 4.1e-40 169.1 217 48.8
Prupe.1G581100 Prunus persica HOM05D001829 ORTHO05D003548 4.1e-40 169.1 255 45.5
Ca_00041_v3 Cicer arietinum L. HOM05D001829 ORTHO05D003548 5.3e-40 168.7 257 47.5
DCAR_029162 Daucus carota HOM05D001829 ORTHO05D003548 7.7e-39 164.9 292 41.4
Glyma.16G002300 Glycine max HOM05D001829 ORTHO05D003548 5.0e-38 162.2 257 45.5
Duzib248G0405 Durio zibethinus HOM05D001829 ORTHO05D003548 8.5e-38 161.4 256 47.7
Phvul.006G219800 Phaseolus vulgaris HOM05D001829 ORTHO05D003548 1.1e-37 161.0 257 45.1
TPR.G29252 Trifolium pratense HOM05D001829 ORTHO05D003548 3.2e-37 159.5 257 45.5
VMungo0540G0490 Vigna mungo HOM05D001829 ORTHO05D003548 7.2e-37 158.3 255 44.7
Glyma.12G165900 Glycine max HOM05D001829 ORTHO05D003548 9.4e-37 157.9 257 45.5
Eucgr.I02778 Eucalyptus grandis HOM05D001829 ORTHO05D003548 1.6e-36 157.1 252 43.7
MD15G1438000 Malus domestica HOM05D001829 ORTHO05D003548 1.6e-36 157.1 253 43.1
HanXRQChr09g0249081 Helianthus annuus HOM05D001829 ORTHO05D003548 2.7e-36 156.4 250 46.0
Gorai.008G045900 Gossypium raimondii HOM05D001829 ORTHO05D003548 3.6e-36 156.0 254 47.2
Gohir.A12G044600 Gossypium hirsutum HOM05D001829 ORTHO05D003548 4.7e-36 155.6 257 47.5
DCAR_006663 Daucus carota HOM05D001829 ORTHO05D003548 4.0e-35 152.5 255 43.1
Cpa.g.sc113.29 Carica papaya HOM05D001829 ORTHO05D003548 6.8e-35 151.8 200 49.5
Lj6g0013339 Lotus japonicus HOM05D001829 ORTHO05D003548 6.8e-35 151.8 250 44.8
Nitab4.5_0001144g0040 Nicotiana tabacum HOM05D001829 ORTHO05D003548 1.2e-34 151.0 248 42.3
CANSAT54G1136 Cannabis sativa HOM05D001829 ORTHO05D003548 2.0e-34 150.2 236 45.3
Gohir.D12G043600 Gossypium hirsutum HOM05D001829 ORTHO05D003548 4.4e-34 149.1 254 46.5
Prupe.1G550000 Prunus persica HOM05D001829 ORTHO05D003548 9.8e-34 147.9 270 43.0
HanXRQChr06g0182771 Helianthus annuus HOM05D001829 ORTHO05D003548 1.3e-33 147.5 244 46.7
Cfa008128 Carpinus fangiana HOM05D001829 ORTHO05D003548 2.8e-33 146.4 267 42.3
Hund17550 Selenicereus undatus HOM05D001829 ORTHO05D003548 2.8e-33 146.4 242 44.6
PSO017G6510 Papaver somniferum HOM05D001829 ORTHO05D003548 3.7e-33 146.0 327 37.9
Glyma.06G324500 Glycine max HOM05D001829 ORTHO05D003548 8.3e-33 144.8 269 43.1
HanXRQChr03g0067961 Helianthus annuus HOM05D001829 ORTHO05D003548 8.3e-33 144.8 235 44.7
PSO170G5852 Papaver somniferum HOM05D001829 ORTHO05D003548 8.3e-33 144.8 327 38.2
Phvul.005G000800 Phaseolus vulgaris HOM05D001829 ORTHO05D003548 1.1e-32 144.4 272 43.4
Lj3g0019264 Lotus japonicus HOM05D001829 ORTHO05D003548 1.4e-32 144.1 270 44.4
QL09p004825 Quercus lobata HOM05D001829 ORTHO05D003548 1.8e-32 143.7 237 43.9
Lalb_Chr15g0090791 Lupinus albus HOM05D001829 ORTHO05D003548 2.4e-32 143.3 257 42.4
VMungo1080G1494 Vigna mungo HOM05D001829 ORTHO05D003548 2.4e-32 143.3 270 43.0
Lsat_1_v5_gn_7_76760 Lactuca sativa HOM05D001829 ORTHO05D003548 3.1e-32 142.9 246 46.3
TWI14G0679 Tripterygium wilfordii HOM05D001829 ORTHO05D003548 1.2e-31 141.0 247 42.1
ClCG08G000400 Citrullus lanatus HOM05D001829 ORTHO05D003548 2.7e-31 139.8 266 41.7
MELO3C022210.2 Cucumis melo HOM05D001829 ORTHO05D003548 2.7e-31 139.8 268 42.9
ATR1136G031 Amborella trichopoda HOM05D001829 ORTHO05D003548 4.5e-31 139.0 320 35.3
Nitab4.5_0000667g0010 Nicotiana tabacum HOM05D001829 ORTHO05D003548 4.5e-31 139.0 232 42.2
CSS0032132 Camellia sinensis var. sinensis HOM05D001829 ORTHO05D003548 7.7e-31 138.3 119 64.7
Nn5g27503 Nelumbo nucifera HOM05D001829 ORTHO05D003548 7.7e-31 138.3 334 35.9
arahy.Tifrunner.gnm1.ann1.AXP3WA Arachis hypogaea HOM05D001829 ORTHO05D003548 1.0e-30 137.9 256 44.5
Ca_05538_v3 Cicer arietinum L. HOM05D001829 ORTHO05D003548 1.0e-30 137.9 269 42.8
CsaV3_5G040380 Cucumis sativus L. HOM05D001829 ORTHO05D003548 1.7e-30 137.1 261 42.9
Medtr3g005510 Medicago truncatula HOM05D001829 ORTHO05D003548 1.7e-30 137.1 273 42.9
TPR.G25505 Trifolium pratense HOM05D001829 ORTHO05D003548 1.7e-30 137.1 269 42.4
Haze_13907 Corylus avellana HOM05D001829 ORTHO05D003548 5.0e-30 135.6 270 42.6
Lalb_Chr18g0061071 Lupinus albus HOM05D001829 ORTHO05D003548 1.5e-29 134.0 258 41.1
RcHm_v2.0_Chr7g0229091 Rosa chinensis HOM05D001829 ORTHO05D003548 1.9e-29 133.7 243 44.9
Duzib192G0272 Durio zibethinus HOM05D001829 ORTHO05D003548 2.5e-29 133.3 268 38.8
PGSC0003DMG400024884 Solanum tuberosum HOM05D001829 ORTHO05D003548 4.2e-29 132.5 125 60.0
CiPaw.03G018900 Carya illinoinensis HOM05D001829 ORTHO05D003548 1.6e-28 130.6 266 40.2
Ciclev10019695m.g Citrus clementina HOM05D001829 ORTHO05D003548 2.1e-28 130.2 266 42.5
Glyma.04G257000 Glycine max HOM05D001829 ORTHO05D003548 2.1e-28 130.2 268 40.3
Sed0001549 Sechium edule HOM05D001829 ORTHO05D003548 2.7e-28 129.8 264 39.8
HPP92_004491 Vanilla planifolia HOM05D001829 ORTHO05D003548 2.7e-28 129.8 246 40.2
COL.COLO4_30473 Corchorus olitorius HOM05D001829 ORTHO05D003548 6.1e-28 128.6 255 38.8
MD08G1216600 Malus domestica HOM05D001829 ORTHO05D003548 8.0e-28 128.3 263 40.7
TPR.G2074 Trifolium pratense HOM05D001829 ORTHO05D003548 8.0e-28 128.3 257 40.5
Thecc.06G095900 Theobroma cacao HOM05D001829 ORTHO05D003548 1.8e-27 127.1 254 39.4
AUR62022364 Chenopodium quinoa HOM05D001829 ORTHO05D003548 4.0e-27 125.9 261 39.5
FvH4_5g32510 Fragaria vesca HOM05D001829 ORTHO05D003548 8.8e-27 124.8 235 41.3
FAN18G3448 Fragaria x ananassa HOM05D001829 ORTHO05D003548 1.5e-26 124.0 237 40.9
Peaxi162Scf00150g01711 Petunia axillaris HOM05D001829 ORTHO05D003548 1.5e-26 124.0 230 41.3
FAN08G2186 Fragaria x ananassa HOM05D001829 ORTHO05D003548 9.8e-26 121.3 235 40.9
FAN13G0664 Fragaria x ananassa HOM05D001829 ORTHO05D003548 1.3e-25 120.9 235 40.4
Psat1g000720 Pisum sativum HOM05D001829 ORTHO05D003548 2.2e-25 120.2 270 40.0
arahy.Tifrunner.gnm1.ann1.UF24CP Arachis hypogaea HOM05D001829 ORTHO05D003548 2.8e-25 119.8 256 41.8
Atru.chr13.2294 Acer truncatum HOM05D001829 ORTHO05D003548 3.7e-25 119.4 268 40.7
Gohir.D02G237100 Gossypium hirsutum HOM05D001829 ORTHO05D003548 3.7e-25 119.4 256 43.0
MD15G1403800 Malus domestica HOM05D001829 ORTHO05D003548 6.3e-25 118.6 247 43.3
CANSAT25G1748 Cannabis sativa HOM05D001829 ORTHO05D003548 8.3e-25 118.2 259 37.8
Gorai.005G265700 Gossypium raimondii HOM05D001829 ORTHO05D003548 8.3e-25 118.2 256 42.6
CDE05G1946 Ceratophyllum demersum HOM05D001829 ORTHO05D003548 1.2e-23 114.4 282 36.5
Lsat_1_v5_gn_9_119700 Lactuca sativa HOM05D001829 ORTHO05D003548 4.5e-23 112.5 237 41.8
Potri.019G077500 Populus trichocarpa HOM05D001829 ORTHO05D003548 4.5e-23 112.5 234 37.2
THA.LOC104806760 Tarenaya hassleriana HOM05D001829 ORTHO05D003548 5.9e-23 112.1 250 36.4
Aqoxy5G00852 Aquilegia oxysepala HOM05D001829 ORTHO05D003548 1.0e-22 111.3 290 37.6
HPP92_004463 Vanilla planifolia HOM05D001829 ORTHO05D003548 1.0e-22 111.3 218 39.9
EL10Ac1g01660 Beta vulgaris HOM05D001829 ORTHO05D003548 1.3e-22 110.9 255 38.8
Gohir.A03G215600 Gossypium hirsutum HOM05D001829 ORTHO05D003548 1.7e-22 110.5 232 42.2
Thhalv10007455m.g Eutrema salsugineum HOM05D001829 ORTHO05D003548 2.3e-22 110.2 252 37.3
THA.LOC104815973 Tarenaya hassleriana HOM05D001829 ORTHO05D003548 5.0e-22 109.0 253 36.8
unitig_8.g4545 Utricularia gibba HOM05D001829 ORTHO05D003548 6.6e-22 108.6 222 38.3
unitig_578.g15958 Utricularia gibba HOM05D001829 ORTHO05D003548 8.6e-22 108.2 223 38.6
Sed0004336 Sechium edule HOM05D001829 ORTHO05D003548 1.1e-21 107.8 251 36.3
Ah.05g168630 Amaranthus hybridus HOM05D001829 ORTHO05D001489 4.3e-21 105.9 216 37.5
CDE05G3483 Ceratophyllum demersum HOM05D001829 ORTHO05D003548 7.3e-21 105.1 282 34.0
AL1G48420 Arabidopsis lyrata HOM05D001829 ORTHO05D003548 1.6e-20 104.0 251 35.9
AT1G33980 Arabidopsis thaliana HOM05D001829 ORTHO05D003548 2.8e-20 103.2 216 39.4
arahy.Tifrunner.gnm1.ann1.1V6YFN Arachis hypogaea HOM05D001829 ORTHO05D003548 4.7e-20 102.4 216 39.8
AUR62034338 Chenopodium quinoa HOM05D001829 ORTHO05D003548 1.0e-19 101.3 252 37.7
Sc20g0003300 Simmondsia chinensis HOM05D001829 ORTHO05D003548 1.4e-19 100.9 271 33.9
Aa31LG6G8200 Aethionema arabicum HOM05D001829 ORTHO05D003548 2.3e-19 100.1 230 34.8
BcaC05g27789 Brassica carinata HOM05D001829 ORTHO05D003548 3.0e-19 99.8 221 36.7
Sabra19G0088600 Salix brachista HOM05D001829 ORTHO05D003548 4.0e-19 99.4 226 35.8
BcaB03g13685 Brassica carinata HOM05D001829 ORTHO05D003548 6.8e-19 98.6 222 35.6
CiPaw.06G175000 Carya illinoinensis HOM05D001829 ORTHO05D003548 8.9e-19 98.2 164 42.7
Lj5C270G4 Lonicera japonica HOM05D001829 ORTHO05D001339 2.6e-18 96.7 165 42.4
Zm00001eb082220 Zea mays HOM05D001829 ORTHO05D003548 5.7e-18 95.5 227 38.3
TWI23G1244 Tripterygium wilfordii HOM05D001829 ORTHO05D003548 2.2e-17 93.6 269 32.0
BcaB07g33017 Brassica carinata HOM05D001829 ORTHO05D003548 6.4e-17 92.0 218 35.3
Carub.0001s3206 Capsella rubella HOM05D001829 ORTHO05D003548 6.4e-17 92.0 243 35.0
CARHR033360 Cardamine hirsuta HOM05D001829 ORTHO05D003548 6.4e-17 92.0 219 36.1
arahy.Tifrunner.gnm1.ann1.PU5J2F Arachis hypogaea HOM05D001829 ORTHO05D003548 8.3e-17 91.7 250 37.6
Gorai.010G229700 Gossypium raimondii HOM05D001829 ORTHO05D003548 1.1e-16 91.3 270 33.7
Zm00001eb422950 Zea mays HOM05D001829 ORTHO05D003548 1.4e-16 90.9 223 37.7
BcaB04g17913 Brassica carinata HOM05D001829 ORTHO05D003548 4.1e-16 89.4 248 34.3
BolC6t36349H Brassica oleracea HOM05D001829 ORTHO05D003548 7.0e-16 88.6 220 34.1
Gohir.D06G197400 Gossypium hirsutum HOM05D001829 ORTHO05D003548 7.0e-16 88.6 254 33.5
BcaC08g43827 Brassica carinata HOM05D001829 ORTHO05D003548 9.2e-16 88.2 221 33.9
A05p24170 Brassica napus HOM05D001829 ORTHO05D003548 1.2e-15 87.8 194 35.6
BraA05t21296Z Brassica rapa HOM05D001829 ORTHO05D003548 1.2e-15 87.8 194 35.6
Sp1g29240 Schrenkiella parvula HOM05D001829 ORTHO05D003548 1.2e-15 87.8 223 35.4
Gohir.A06G188800 Gossypium hirsutum HOM05D001829 ORTHO05D003548 1.6e-15 87.4 270 33.0
BolC5t32519H Brassica oleracea HOM05D001829 ORTHO05D003548 2.7e-15 86.7 194 35.1
A08p08420 Brassica napus HOM05D001829 ORTHO05D003548 1.7e-14 84.0 234 34.6
C05p37840 Brassica napus HOM05D001829 ORTHO05D003548 5.0e-14 82.4 194 34.5
Os04g0440100 Oryza sativa ssp. japonica HOM05D001829 ORTHO05D003548 5.0e-14 82.4 227 36.1
BolC8t47884H Brassica oleracea HOM05D001829 ORTHO05D003548 2.1e-12 77.0 231 33.3
Actinidia00172 Actinidia chinensis HOM05D001829 ORTHO05D003548 4.7e-12 75.9 101 46.5
Gohir.D11G271033 Gossypium hirsutum HOM05D001829 ORTHO05D003548 4.7e-12 75.9 184 34.2
BraA09t38799Z Brassica rapa HOM05D001829 ORTHO05D003548 1.4e-11 74.3 196 32.1
CSS0013372 Camellia sinensis var. sinensis HOM05D001829 ORTHO05D003548 1.8e-11 73.9 76 52.6
SHI42178 Sapria himalayana HOM05D001829 ORTHO05D003548 1.8e-11 73.9 206 35.0
SEGI_13151 Sequoiadendron giganteum HOM05D001829 ORTHO05D003548 3.1e-11 73.2 292 31.8
A09p32580 Brassica napus HOM05D001829 ORTHO05D003548 4.4e-10 69.3 194 30.9
Aa31LG9G12070 Aethionema arabicum HOM05D001829 ORTHO05D003548 9.8e-10 68.2 188 31.9
C06p12110 Brassica napus HOM05D001829 ORTHO05D003548 1.3e-09 67.8 194 30.9
SEGI_14492 Sequoiadendron giganteum HOM05D001829 ORTHO05D003548 3.7e-09 66.2 141 37.6
GSVIVG01034834001 Vitis vinifera HOM05D001829 ORTHO05D003548 1.4e-08 64.3 84 51.2
GSVIVG01034840001 Vitis vinifera HOM05D001829 ORTHO05D003548 4.1e-08 62.8 84 51.2
Duzib052G1145 Durio zibethinus HOM05D001829 ORTHO05D003548 6.0e-07 58.9 60 58.3


User provided reference genes

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