Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028814.1 Olea europaea HOM05D006152 ORTHO05D008137 5.0e-96 354.4 171 100.0
Oeu043492.1 Olea europaea HOM05D006152 ORTHO05D008137 1.1e-47 193.7 178 59.0
Cc06_g15390 Coffea canephora HOM05D006152 ORTHO05D008137 7.3e-39 164.5 177 50.3
Ciclev10008799m.g Citrus clementina HOM05D006152 ORTHO05D008137 2.4e-37 159.5 178 48.9
COL.COLO4_18762 Corchorus olitorius HOM05D006152 ORTHO05D008137 3.1e-37 159.1 177 49.7
Rhsim01G0042700 Rhododendron simsii HOM05D006152 ORTHO05D008137 3.1e-37 159.1 178 47.8
Manes.06G038100 Manihot esculenta HOM05D006152 ORTHO05D008137 1.2e-36 157.1 177 47.5
QL02p092448 Quercus lobata HOM05D006152 ORTHO05D008137 1.5e-36 156.8 178 49.4
MSTRG.26302 Avicennia marina HOM05D006152 ORTHO05D008137 2.6e-36 156.0 178 48.9
Hma1.2p1_0222F.1_g093200 Hydrangea macrophylla HOM05D006152 ORTHO05D008137 3.4e-36 155.6 163 52.1
Hma1.2p1_0222F.1_g093210 Hydrangea macrophylla HOM05D006152 ORTHO05D008137 3.4e-36 155.6 163 52.1
Thecc.09G035000 Theobroma cacao HOM05D006152 ORTHO05D008137 3.4e-36 155.6 177 48.6
MBI15_g30906_MAGBIO Magnolia biondii HOM05D006152 ORTHO05D008137 4.4e-36 155.2 161 51.6
TWI32G1323 Tripterygium wilfordii HOM05D006152 ORTHO05D008137 7.6e-36 154.5 178 47.2
Rhsim01G0046600 Rhododendron simsii HOM05D006152 ORTHO05D008137 9.9e-36 154.1 196 43.9
Migut.K00351 Erythranthe guttata HOM05D006152 ORTHO05D008137 1.3e-35 153.7 178 47.2
QL02p092408 Quercus lobata HOM05D006152 ORTHO05D008137 1.3e-35 153.7 179 48.0
vmacro13046 Vaccinium macrocarpon HOM05D006152 ORTHO05D008137 2.2e-35 152.9 179 46.9
vmacro23231 Vaccinium macrocarpon HOM05D006152 ORTHO05D008137 2.2e-35 152.9 179 46.9
Aqoxy1G03917 Aquilegia oxysepala HOM05D006152 ORTHO05D008137 3.8e-35 152.1 178 48.9
Nitab4.5_0001094g0060 Nicotiana tabacum HOM05D006152 ORTHO05D008137 3.8e-35 152.1 125 58.4
SGA_v2.0_scaffold387G50519 Striga asiatica HOM05D006152 ORTHO05D008137 3.8e-35 152.1 178 47.2
CSS0018805 Camellia sinensis var. sinensis HOM05D006152 ORTHO05D008137 1.1e-34 150.6 179 47.5
Actinidia38346 Actinidia chinensis HOM05D006152 ORTHO05D008137 7.1e-34 147.9 178 47.2
Gohir.D05G052200 Gossypium hirsutum HOM05D006152 ORTHO05D008137 7.1e-34 147.9 162 49.4
RcHm_v2.0_Chr2g0086151 Rosa chinensis HOM05D006152 ORTHO05D008137 1.6e-33 146.7 178 46.6
Gohir.A05G050600 Gossypium hirsutum HOM05D006152 ORTHO05D008137 3.5e-33 145.6 162 48.1
Gorai.009G054000 Gossypium raimondii HOM05D006152 ORTHO05D008137 4.6e-33 145.2 173 46.2
DCAR_019366 Daucus carota HOM05D006152 ORTHO05D008137 7.8e-33 144.4 151 49.0
Lj7A453G70 Lonicera japonica HOM05D006152 ORTHO05D008137 7.8e-33 144.4 178 45.5
CSS0025720 Camellia sinensis var. sinensis HOM05D006152 ORTHO05D008137 2.3e-32 142.9 204 41.2
CiPaw.16G115700 Carya illinoinensis HOM05D006152 ORTHO05D008137 2.3e-32 142.9 177 45.2
HanXRQChr10g0314551 Helianthus annuus HOM05D006152 ORTHO05D008137 3.9e-32 142.1 176 44.3
Prupe.7G259100 Prunus persica HOM05D006152 ORTHO05D008137 3.9e-32 142.1 154 50.0
FvH4_1g01320 Fragaria vesca HOM05D006152 ORTHO05D008137 5.1e-32 141.7 178 45.5
FAN23G2003 Fragaria x ananassa HOM05D006152 ORTHO05D008137 5.1e-32 141.7 178 45.5
Haze_19246 Corylus avellana HOM05D006152 ORTHO05D008137 6.6e-32 141.4 179 44.1
CAN.G520.14 Capsicum annuum HOM05D006152 ORTHO05D008137 8.7e-32 141.0 153 48.4
Nitab4.5_0003856g0050 Nicotiana tabacum HOM05D006152 ORTHO05D008137 1.5e-31 140.2 149 49.0
Lsat_1_v5_gn_5_90820 Lactuca sativa HOM05D006152 ORTHO05D008137 1.9e-31 139.8 154 47.4
VMungo1215G1041 Vigna mungo HOM05D006152 ORTHO05D008137 2.5e-31 139.4 177 43.5
Solyc07g005120.3 Solanum lycopersicum HOM05D006152 ORTHO05D008137 3.3e-31 139.0 149 49.0
Glyma.13G155700 Glycine max HOM05D006152 ORTHO05D008137 4.3e-31 138.7 177 43.5
Nn2g12295 Nelumbo nucifera HOM05D006152 ORTHO05D008137 4.3e-31 138.7 167 46.1
Sopen07g001260 Solanum pennellii HOM05D006152 ORTHO05D008137 4.3e-31 138.7 149 49.0
PGSC0003DMG400003198 Solanum tuberosum HOM05D006152 ORTHO05D008137 5.6e-31 138.3 149 48.3
Sabra06G0143900 Salix brachista HOM05D006152 ORTHO05D008137 9.6e-31 137.5 219 38.4
Sabra06G0145100 Salix brachista HOM05D006152 ORTHO05D008137 9.6e-31 137.5 219 38.4
Psat4g007440 Pisum sativum HOM05D006152 ORTHO05D008137 1.3e-30 137.1 155 46.5
SalBow5G3728 Salvia bowleyana HOM05D001472 ORTHO05D002655 1.6e-30 136.7 183 43.7
Peaxi162Scf00347g00517 Petunia axillaris HOM05D006152 ORTHO05D008137 3.6e-30 135.6 182 42.9
SalBow1G4451 Salvia bowleyana HOM05D001472 ORTHO05D002655 3.6e-30 135.6 177 44.1
Sc14g0000030 Simmondsia chinensis HOM05D006152 ORTHO05D008137 3.6e-30 135.6 161 46.0
ECA234G4022 Erigeron canadensis HOM05D000464 ORTHO05D000408 4.8e-30 135.2 167 43.1
AUR62041375 Chenopodium quinoa HOM05D001472 ORTHO05D002655 6.2e-30 134.8 175 43.4
MD02G1011000 Malus domestica HOM05D006152 ORTHO05D008137 8.1e-30 134.4 156 45.5
MD15G1156000 Malus domestica HOM05D006152 ORTHO05D008137 1.1e-29 134.0 156 46.2
Cpa.g.sc46.115 Carica papaya HOM05D006152 ORTHO05D008137 1.8e-29 133.3 149 48.3
Lalb_Chr12g0198561 Lupinus albus HOM05D006152 ORTHO05D008137 2.4e-29 132.9 194 40.2
Eucgr.C00382 Eucalyptus grandis HOM05D006152 ORTHO05D008137 3.1e-29 132.5 188 40.4
Medtr4g131670 Medicago truncatula HOM05D006152 ORTHO05D008137 3.1e-29 132.5 155 43.9
PSO384G3563 Papaver somniferum HOM05D006152 ORTHO05D008137 5.3e-29 131.7 180 43.3
PSO384G4708 Papaver somniferum HOM05D006152 ORTHO05D008137 5.3e-29 131.7 180 43.3
Lj4g0021784 Lotus japonicus HOM05D006152 ORTHO05D008137 2.0e-28 129.8 179 42.5
Phvul.003G158400 Phaseolus vulgaris HOM05D006152 ORTHO05D008137 3.4e-28 129.0 177 40.7
arahy.Tifrunner.gnm1.ann1.L77CZK Arachis hypogaea HOM05D006152 ORTHO05D008137 7.6e-28 127.9 188 38.8
arahy.Tifrunner.gnm1.ann1.QAR9AW Arachis hypogaea HOM05D006152 ORTHO05D008137 7.6e-28 127.9 188 38.8
TPR.G6509 Trifolium pratense HOM05D006152 ORTHO05D008137 2.2e-27 126.3 177 40.7
AUR62017200 Chenopodium quinoa HOM05D006152 ORTHO05D008137 2.9e-27 125.9 176 42.6
CsaV3_2G003440 Cucumis sativus L. HOM05D006152 ORTHO05D008137 6.4e-27 124.8 178 43.3
PGR142G2956 Punica granatum HOM05D006152 ORTHO05D008137 8.4e-27 124.4 157 43.3
Sp6g19860 Schrenkiella parvula HOM05D006152 ORTHO05D008137 8.4e-27 124.4 150 44.7
MELO3C004453.2 Cucumis melo HOM05D006152 ORTHO05D008137 1.9e-26 123.2 178 43.3
Os06g0182400 Oryza sativa ssp. japonica HOM05D006152 ORTHO05D008137 1.9e-26 123.2 148 41.9
Hund21620 Selenicereus undatus HOM05D006152 ORTHO05D008137 2.4e-26 122.9 171 40.9
TPR.G37046 Trifolium pratense HOM05D006152 ORTHO05D008137 9.3e-26 120.9 178 39.9
AUR62019760 Chenopodium quinoa HOM05D001472 ORTHO05D002655 1.2e-25 120.6 148 43.9
Sed0008154 Sechium edule HOM05D006152 ORTHO05D008137 1.2e-25 120.6 178 43.3
unitig_899.g15450 Utricularia gibba HOM05D006152 ORTHO05D003911 1.2e-25 120.6 177 40.1
AUR62010759 Chenopodium quinoa HOM05D001472 ORTHO05D002655 1.6e-25 120.2 149 43.0
AL8G34300 Arabidopsis lyrata HOM05D006152 ORTHO05D008137 2.7e-25 119.4 162 42.6
EL10Ac8g18846 Beta vulgaris HOM05D006152 ORTHO05D008137 2.7e-25 119.4 163 43.6
ATR0184G013 Amborella trichopoda HOM05D006152 ORTHO05D008137 4.6e-25 118.6 159 38.4
PSO339G6042 Papaver somniferum HOM05D006152 ORTHO05D008137 4.6e-25 118.6 170 41.8
CDE05G0292 Ceratophyllum demersum HOM05D006152 ORTHO05D008137 1.3e-24 117.1 152 42.8
Ah.04g162170 Amaranthus hybridus HOM05D006152 ORTHO05D008137 1.8e-24 116.7 161 44.1
Thhalv10014084m.g Eutrema salsugineum HOM05D006152 ORTHO05D008137 1.8e-24 116.7 150 44.0
SEGI_04227 Sequoiadendron giganteum HOM05D006152 ORTHO05D008137 1.8e-24 116.7 162 37.7
AT5G58200 Arabidopsis thaliana HOM05D006152 ORTHO05D008137 3.9e-24 115.5 162 41.4
A02p07870 Brassica napus HOM05D006152 ORTHO05D008137 5.1e-24 115.2 164 42.1
BraA02t05860Z Brassica rapa HOM05D006152 ORTHO05D008137 5.1e-24 115.2 164 42.1
BcaB05g22408 Brassica carinata HOM05D006152 ORTHO05D008137 6.7e-24 114.8 168 42.9
CARHR272000 Cardamine hirsuta HOM05D006152 ORTHO05D008137 8.7e-24 114.4 164 41.5
BcaC03g14112 Brassica carinata HOM05D006152 ORTHO05D008137 1.1e-23 114.0 168 41.7
Carub.0008s1874 Capsella rubella HOM05D006152 ORTHO05D008137 1.5e-23 113.6 178 39.3
THA.LOC104811841 Tarenaya hassleriana HOM05D006152 ORTHO05D008137 4.3e-23 112.1 151 43.7
C02p13510 Brassica napus HOM05D006152 ORTHO05D008137 7.4e-23 111.3 149 43.0
BolC2t07463H Brassica oleracea HOM05D006152 ORTHO05D008137 7.4e-23 111.3 149 43.0
Duzib168G0440 Durio zibethinus HOM05D006152 ORTHO05D008137 6.2e-22 108.2 182 40.1
Migut.K01256 Erythranthe guttata HOM05D006152 ORTHO05D008137 5.3e-21 105.1 121 44.6
Dinv42894 Davidia involucrata HOM05D006152 ORTHO05D008137 7.6e-20 101.3 64 70.3
Potri.006G188200 Populus trichocarpa HOM05D006152 ORTHO05D008137 2.2e-19 99.8 141 43.3
TAR383G0013 Trochodendron aralioides HOM05D006152 ORTHO05D008137 1.4e-18 97.1 64 67.2
Pp3c26_6540 Physcomitrium patens HOM05D006152 ORTHO05D008137 7.1e-18 94.7 154 36.4
AUR62038836 Chenopodium quinoa HOM05D001472 ORTHO05D008137 1.0e-16 90.9 61 63.9
SMO347G0290 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 2.3e-16 89.7 154 34.4
AagrBONN_evm.TU.Sc2ySwM_228.5740 Anthoceros agrestis HOM05D006152 ORTHO05D008137 3.9e-16 89.0 151 37.7
FAN28G1911 Fragaria x ananassa HOM05D006152 ORTHO05D008137 6.7e-16 88.2 73 60.3
Mapoly0124s0018 Marchantia polymorpha HOM05D006152 ORTHO05D008137 1.4e-13 80.5 152 33.6
MD00G1188400 Malus domestica HOM05D006152 ORTHO05D008137 5.3e-13 78.6 64 53.1
ClCG11G003570 Citrullus lanatus HOM05D006152 ORTHO05D008137 6.9e-13 78.2 141 38.3
GSVIVG01001075001 Vitis vinifera HOM05D006152 ORTHO05D008137 2.0e-12 76.6 69 59.4
SMO356G0422 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 4.5e-12 75.5 154 31.2
HPP92_017513 Vanilla planifolia HOM05D006152 ORTHO05D008137 4.5e-12 75.5 64 54.7
SMO169G0164 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 7.6e-12 74.7 152 30.3
Ca_21103_v3 Cicer arietinum L. HOM05D006152 ORTHO05D008137 1.0e-11 74.3 51 64.7
AUR62002687 Chenopodium quinoa HOM05D006152 ORTHO05D008137 7.1e-10 68.2 200 26.5
TAR383G0486 Trochodendron aralioides HOM05D006152 ORTHO05D008137 7.1e-10 68.2 63 55.6
CARHR032820 Cardamine hirsuta HOM05D006152 ORTHO05D008137 1.2e-09 67.4 94 41.5


User provided reference genes

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